RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 KCNE1P15382 129 aa12.89□□□□□ -0.35
HSPG2-206ENST00000439717 GARTP22102 1010 aa12.89□□□□□ -0.35
HSPG2-206ENST00000439717 DNAJB1P25685 340 aa12.89□□□□□ -0.35
HSPG2-206ENST00000439717 OR1G1P47890 313 aa12.89□□□□□ -0.35
HSPG2-206ENST00000439717 DPYDQ12882 1025 aa12.89□□□□□ -0.35
HSPG2-206ENST00000439717 BMS1Q14692 1282 aaKnown RBP12.89□□□□□ -0.35
HSPG2-206ENST00000439717 NAB2Q15742 525 aa12.89□□□□□ -0.35
HSPG2-206ENST00000439717 SLC10A6Q3KNW5 377 aa12.89□□□□□ -0.35
HSPG2-206ENST00000439717 KMT5BQ4FZB7 885 aa12.89□□□□□ -0.35
HSPG2-206ENST00000439717 DDX53Q86TM3 631 aaKnown RBP12.89□□□□□ -0.35
HSPG2-206ENST00000439717 CD302Q8IX05 232 aa12.89□□□□□ -0.35
HSPG2-206ENST00000439717 MICALL1Q8N3F8 863 aa12.89□□□□□ -0.35
HSPG2-206ENST00000439717 POMGNT1Q8WZA1 660 aa12.89□□□□□ -0.35
HSPG2-206ENST00000439717 HPS3Q969F9 1004 aa12.89□□□□□ -0.35
HSPG2-206ENST00000439717 PPP2R3CQ969Q6 453 aa12.89□□□□□ -0.35
HSPG2-206ENST00000439717 PPP1R10Q96QC0 940 aaKnown RBP12.89□□□□□ -0.35
HSPG2-206ENST00000439717 NGRNQ9NPE2 291 aaKnown RBP12.89□□□□□ -0.35
HSPG2-206ENST00000439717 SLC38A7Q9NVC3 462 aa12.89□□□□□ -0.35
HSPG2-206ENST00000439717 AGO2Q9UKV8 859 aaKnown RBP12.89□□□□□ -0.35
HSPG2-206ENST00000439717 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.89□□□□□ -0.35
HSPG2-206ENST00000439717 SMIM28A0A1B0GU29 152 aa12.88□□□□□ -0.35
HSPG2-206ENST00000439717 FSCN2O14926 492 aa12.88□□□□□ -0.35
HSPG2-206ENST00000439717 KIAA0391O15091 583 aaKnown RBP12.88□□□□□ -0.35
HSPG2-206ENST00000439717 ADRB2P07550 413 aa12.88□□□□□ -0.35
HSPG2-206ENST00000439717 ADSSP30520 456 aa12.88□□□□□ -0.35
HSPG2-206ENST00000439717 SNRPFP62306 86 aaKnown RBP12.88□□□□□ -0.35
HSPG2-206ENST00000439717 CCDC85BQ15834 202 aaPredicted RBP12.88□□□□□ -0.35
HSPG2-206ENST00000439717 BMT2Q1RMZ1 405 aa12.88□□□□□ -0.35
HSPG2-206ENST00000439717 SEZ6Q53EL9 994 aa12.88□□□□□ -0.35
HSPG2-206ENST00000439717 CLEC17AQ6ZS10 378 aa12.88□□□□□ -0.35
HSPG2-206ENST00000439717 TMEM173Q86WV6 379 aaPredicted RBP12.88□□□□□ -0.35
HSPG2-206ENST00000439717 ELOA2Q8IYF1 753 aaPredicted RBP12.88□□□□□ -0.35
HSPG2-206ENST00000439717 GLIS3Q8NEA6 775 aa12.88□□□□□ -0.35
HSPG2-206ENST00000439717 SCFD1Q8WVM8 642 aa12.88□□□□□ -0.35
HSPG2-206ENST00000439717 UROC1Q96N76 676 aa12.88□□□□□ -0.35
HSPG2-206ENST00000439717 CXCL16Q9H2A7 254 aa12.88□□□□□ -0.35
HSPG2-206ENST00000439717 RPF1Q9H9Y2 349 aaKnown RBP12.88□□□□□ -0.35
HSPG2-206ENST00000439717 SLC39A2Q9NP94 309 aa12.88□□□□□ -0.35
HSPG2-206ENST00000439717 MARCH5Q9NX47 278 aa12.88□□□□□ -0.35
HSPG2-206ENST00000439717 HOOK1Q9UJC3 728 aaKnown RBP12.88□□□□□ -0.35
HSPG2-206ENST00000439717 CPSF3Q9UKF6 684 aaKnown RBP12.88□□□□□ -0.35
HSPG2-206ENST00000439717 PLXNA4Q9HCM2 1894 aa12.87□□□□□ -0.35
HSPG2-206ENST00000439717 TTC26A0AVF1 554 aa12.87□□□□□ -0.35
HSPG2-206ENST00000439717 TISP43B9A030 160 aa12.87□□□□□ -0.35
HSPG2-206ENST00000439717 MEFVO15553 781 aaPredicted RBP12.87□□□□□ -0.35
HSPG2-206ENST00000439717 NCK2O43639 380 aa12.87□□□□□ -0.35
HSPG2-206ENST00000439717 RHOBTB3O94955 611 aa12.87□□□□□ -0.35
HSPG2-206ENST00000439717 LDHAP00338 332 aaKnown RBP12.87□□□□□ -0.35
HSPG2-206ENST00000439717 PRR29P0C7W0 189 aa12.87□□□□□ -0.35
HSPG2-206ENST00000439717 CXCL8P10145 99 aa12.87□□□□□ -0.35
HSPG2-206ENST00000439717 HOXD13P35453 343 aa12.87□□□□□ -0.35
HSPG2-206ENST00000439717 TNFSF9P41273 254 aa12.87□□□□□ -0.35
HSPG2-206ENST00000439717 ERVFC1P60507 584 aa12.87□□□□□ -0.35
HSPG2-206ENST00000439717 UBE2HP62256 183 aa12.87□□□□□ -0.35
HSPG2-206ENST00000439717 PPP2R3AQ06190 1150 aa12.87□□□□□ -0.35
HSPG2-206ENST00000439717 HSP90AA2PQ14568 343 aaPredicted RBP12.87□□□□□ -0.35
HSPG2-206ENST00000439717 KCNB1Q14721 858 aa12.87□□□□□ -0.35
HSPG2-206ENST00000439717 ENOX2Q16206 610 aaKnown RBP12.87□□□□□ -0.35
HSPG2-206ENST00000439717 GLRA4Q5JXX5 417 aa12.87□□□□□ -0.35
HSPG2-206ENST00000439717 MICAL1Q8TDZ2 1067 aa12.87□□□□□ -0.35
HSPG2-206ENST00000439717 BCL7CQ8WUZ0 217 aaPredicted RBP12.87□□□□□ -0.35
HSPG2-206ENST00000439717 PPM1EQ8WY54 764 aa12.87□□□□□ -0.35
HSPG2-206ENST00000439717 DDX27Q96GQ7 796 aaKnown RBP12.87□□□□□ -0.35
HSPG2-206ENST00000439717 ZMAT2Q96NC0 199 aaKnown RBP12.87□□□□□ -0.35
HSPG2-206ENST00000439717 TCF25Q9BQ70 676 aa12.87□□□□□ -0.35
HSPG2-206ENST00000439717 IKZF4Q9H2S9 585 aa12.87□□□□□ -0.35
HSPG2-206ENST00000439717 ENTPD7Q9NQZ7 604 aa12.87□□□□□ -0.35
HSPG2-206ENST00000439717 CGNQ9P2M7 1197 aaKnown RBP12.87□□□□□ -0.35
HSPG2-206ENST00000439717 PRG3Q9Y2Y8 225 aaPredicted RBP12.87□□□□□ -0.35
HSPG2-206ENST00000439717 TDRD15B5MCY1 1934 aaKnown RBP12.87□□□□□ -0.35
HSPG2-206ENST00000439717 MYO9BQ13459 2157 aa12.86□□□□□ -0.35
HSPG2-206ENST00000439717 FSD2A1L4K1 749 aa12.86□□□□□ -0.35
HSPG2-206ENST00000439717 CASTOR2A6NHX0 329 aa12.86□□□□□ -0.35
HSPG2-206ENST00000439717 TMEM189-UBE2V1I3L0A0 370 aa12.86□□□□□ -0.35
HSPG2-206ENST00000439717 XPOTO43592 962 aaKnown RBP12.86□□□□□ -0.35
HSPG2-206ENST00000439717 KINO60870 393 aaKnown RBP12.86□□□□□ -0.35
HSPG2-206ENST00000439717 GADD45BO75293 160 aaPredicted RBP12.86□□□□□ -0.35
HSPG2-206ENST00000439717 KIF20AO95235 890 aa12.86□□□□□ -0.35
HSPG2-206ENST00000439717 EFEMP2O95967 443 aa12.86□□□□□ -0.35
HSPG2-206ENST00000439717 CTSAP10619 480 aa12.86□□□□□ -0.35
HSPG2-206ENST00000439717 RPL9P32969 192 aaKnown RBP12.86□□□□□ -0.35
HSPG2-206ENST00000439717 IRS1P35568 1242 aa12.86□□□□□ -0.35
HSPG2-206ENST00000439717 ACOT2P49753 483 aa12.86□□□□□ -0.35
HSPG2-206ENST00000439717 STK4Q13043 487 aa12.86□□□□□ -0.35
HSPG2-206ENST00000439717 SMC1AQ14683 1233 aaKnown RBP12.86□□□□□ -0.35
HSPG2-206ENST00000439717 KNOP1Q1ED39 458 aaKnown RBP12.86□□□□□ -0.35
HSPG2-206ENST00000439717 TCEAL5Q5H9L2 206 aa12.86□□□□□ -0.35
HSPG2-206ENST00000439717 ZBTB41Q5SVQ8 909 aa12.86□□□□□ -0.35
HSPG2-206ENST00000439717 ARMCX5Q6P1M9 558 aa12.86□□□□□ -0.35
HSPG2-206ENST00000439717 DCLRE1AQ6PJP8 1040 aa12.86□□□□□ -0.35
HSPG2-206ENST00000439717 HS2ST1Q7LGA3 356 aa12.86□□□□□ -0.35
HSPG2-206ENST00000439717 TMC7Q7Z402 723 aa12.86□□□□□ -0.35
HSPG2-206ENST00000439717 VPS52Q8N1B4 723 aa12.86□□□□□ -0.35
HSPG2-206ENST00000439717 GOLGA5Q8TBA6 731 aa12.86□□□□□ -0.35
HSPG2-206ENST00000439717 CDCA3Q99618 268 aaPredicted RBP12.86□□□□□ -0.35
HSPG2-206ENST00000439717 ZBP1Q9H171 429 aa12.86□□□□□ -0.35
HSPG2-206ENST00000439717 ASB7Q9H672 318 aa12.86□□□□□ -0.35
HSPG2-206ENST00000439717 ADAM28Q9UKQ2 775 aa12.86□□□□□ -0.35
HSPG2-206ENST00000439717 COG5Q9UP83 839 aa12.86□□□□□ -0.35
HSPG2-206ENST00000439717 SSX2IPQ9Y2D8 614 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms