RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 CCDC22O60826 627 aa21.92■■□□□ 1.1
TMEFF1-201ENST00000374879 LMNB1P20700 586 aa21.92■■□□□ 1.1
TMEFF1-201ENST00000374879 STAT1P42224 750 aa21.92■■□□□ 1.1
TMEFF1-201ENST00000374879 SLC45A4Q5BKX6 768 aa21.92■■□□□ 1.1
TMEFF1-201ENST00000374879 DGKHQ86XP1 1220 aa21.92■■□□□ 1.1
TMEFF1-201ENST00000374879 ANKRD35Q8N283 1001 aa21.92■■□□□ 1.1
TMEFF1-201ENST00000374879 STKLD1Q8NE28 680 aa21.92■■□□□ 1.1
TMEFF1-201ENST00000374879 IWS1Q96ST2 819 aa21.92■■□□□ 1.1
TMEFF1-201ENST00000374879 SAR1AQ9NR31 198 aa21.92■■□□□ 1.1
TMEFF1-201ENST00000374879 GCNT4Q9P109 453 aa21.92■■□□□ 1.1
TMEFF1-201ENST00000374879 PYGMP11217 842 aa21.91■■□□□ 1.1
TMEFF1-201ENST00000374879 XRCC5P13010 732 aaKnown RBP21.91■■□□□ 1.1
TMEFF1-201ENST00000374879 C12orf60Q5U649 245 aa21.91■■□□□ 1.1
TMEFF1-201ENST00000374879 RHBDF2Q6PJF5 856 aa21.91■■□□□ 1.1
TMEFF1-201ENST00000374879 UBL4BQ8N7F7 174 aa21.91■■□□□ 1.1
TMEFF1-201ENST00000374879 SPZ1Q9BXG8 430 aa21.91■■□□□ 1.1
TMEFF1-201ENST00000374879 CDH16O75309 829 aa21.91■■□□□ 1.1
TMEFF1-201ENST00000374879 TCEA3O75764 348 aa21.91■■□□□ 1.1
TMEFF1-201ENST00000374879 TDP2O95551 362 aa21.91■■□□□ 1.1
TMEFF1-201ENST00000374879 ASLP04424 464 aa21.91■■□□□ 1.1
TMEFF1-201ENST00000374879 LLGL1Q15334 1064 aa21.91■■□□□ 1.1
TMEFF1-201ENST00000374879 FRMD5Q7Z6J6 570 aa21.91■■□□□ 1.1
TMEFF1-201ENST00000374879 PALB2Q86YC2 1186 aa21.91■■□□□ 1.1
TMEFF1-201ENST00000374879 STK32BQ9NY57 414 aa21.91■■□□□ 1.1
TMEFF1-201ENST00000374879 NINJ2Q9NZG7 142 aa21.91■■□□□ 1.1
TMEFF1-201ENST00000374879 TMED2Q15363 201 aa21.9■■□□□ 1.1
TMEFF1-201ENST00000374879 CYP1B1Q16678 543 aa21.9■■□□□ 1.1
TMEFF1-201ENST00000374879 SPDYAQ5MJ70 313 aa21.9■■□□□ 1.1
TMEFF1-201ENST00000374879 RFX8Q6ZV50 586 aa21.9■■□□□ 1.1
TMEFF1-201ENST00000374879 ZSWIM1Q9BR11 485 aa21.9■■□□□ 1.1
TMEFF1-201ENST00000374879 SEPT11Q9NVA2 429 aaKnown RBP21.9■■□□□ 1.1
TMEFF1-201ENST00000374879 ARL8BQ9NVJ2 186 aa21.9■■□□□ 1.1
TMEFF1-201ENST00000374879 CHMP2BQ9UQN3 213 aa21.9■■□□□ 1.1
TMEFF1-201ENST00000374879 USP17L3A6NCW0 530 aa21.9■■□□□ 1.1
TMEFF1-201ENST00000374879 USP17L4A6NCW7 530 aa21.9■■□□□ 1.1
TMEFF1-201ENST00000374879 EDRF1Q3B7T1 1238 aa21.9■■□□□ 1.1
TMEFF1-201ENST00000374879 PLEKHG4Q58EX7 1191 aa21.9■■□□□ 1.1
TMEFF1-201ENST00000374879 SEL1L2Q5TEA6 688 aa21.9■■□□□ 1.1
TMEFF1-201ENST00000374879 MARK2Q7KZI7 788 aaKnown RBP21.9■■□□□ 1.1
TMEFF1-201ENST00000374879 USP17L1Q7RTZ2 530 aa21.9■■□□□ 1.1
TMEFF1-201ENST00000374879 NAT14Q8WUY8 206 aa21.9■■□□□ 1.1
TMEFF1-201ENST00000374879 MKNK2Q9HBH9 465 aa21.9■■□□□ 1.1
TMEFF1-201ENST00000374879 C6orf50Q9HD87 102 aa21.9■■□□□ 1.1
TMEFF1-201ENST00000374879 NPHS2Q9NP85 383 aa21.9■■□□□ 1.1
TMEFF1-201ENST00000374879 TBC1D30Q9Y2I9 924 aa21.9■■□□□ 1.1
TMEFF1-201ENST00000374879 UMODL1Q5DID0 1318 aa21.89■■□□□ 1.1
TMEFF1-201ENST00000374879 GYG2O15488 501 aa21.89■■□□□ 1.09
TMEFF1-201ENST00000374879 PPP2R5CQ13362 524 aa21.89■■□□□ 1.09
TMEFF1-201ENST00000374879 THOC5Q13769 683 aaKnown RBP21.89■■□□□ 1.09
TMEFF1-201ENST00000374879 SPTY2D1Q68D10 685 aaPredicted RBP21.89■■□□□ 1.09
TMEFF1-201ENST00000374879 IZUMO2Q6UXV1 221 aa21.89■■□□□ 1.09
TMEFF1-201ENST00000374879 CCDC65Q8IXS2 484 aa21.89■■□□□ 1.09
TMEFF1-201ENST00000374879 SCYL3Q8IZE3 742 aa21.89■■□□□ 1.09
TMEFF1-201ENST00000374879 RIBC1Q8N443 379 aaPredicted RBP21.89■■□□□ 1.09
TMEFF1-201ENST00000374879 DENND1AQ8TEH3 1009 aa21.89■■□□□ 1.09
TMEFF1-201ENST00000374879 GJA10Q969M2 543 aa21.89■■□□□ 1.09
TMEFF1-201ENST00000374879 ZHX3Q9H4I2 956 aa21.89■■□□□ 1.09
TMEFF1-201ENST00000374879 BMP2KQ9NSY1 1161 aaPredicted RBP21.89■■□□□ 1.09
TMEFF1-201ENST00000374879 WHRNQ9P202 907 aa21.89■■□□□ 1.09
TMEFF1-201ENST00000374879 ACTL7BQ9Y614 415 aa21.89■■□□□ 1.09
TMEFF1-201ENST00000374879 PLSCR1O15162 318 aa21.89■■□□□ 1.09
TMEFF1-201ENST00000374879 CASP5P51878 434 aa21.89■■□□□ 1.09
TMEFF1-201ENST00000374879 SIX1Q15475 284 aaPredicted RBP21.89■■□□□ 1.09
TMEFF1-201ENST00000374879 OTOAQ7RTW8 1153 aa21.89■■□□□ 1.09
TMEFF1-201ENST00000374879 SPATA24Q86W54 205 aa21.89■■□□□ 1.09
TMEFF1-201ENST00000374879 PHACTR1Q9C0D0 580 aa21.89■■□□□ 1.09
TMEFF1-201ENST00000374879 CYLDQ9NQC7 956 aa21.89■■□□□ 1.09
TMEFF1-201ENST00000374879 NARFQ9UHQ1 456 aa21.89■■□□□ 1.09
TMEFF1-201ENST00000374879 CNTNAP4Q9C0A0 1308 aa21.88■■□□□ 1.09
TMEFF1-201ENST00000374879 CFAP69A5D8W1 941 aa21.88■■□□□ 1.09
TMEFF1-201ENST00000374879 E9PMD0 336 aa21.88■■□□□ 1.09
TMEFF1-201ENST00000374879 C2CD2LO14523 706 aa21.88■■□□□ 1.09
TMEFF1-201ENST00000374879 HNRNPCL1O60812 293 aaKnown RBP21.88■■□□□ 1.09
TMEFF1-201ENST00000374879 GGPS1O95749 300 aa21.88■■□□□ 1.09
TMEFF1-201ENST00000374879 ITGA2BP08514 1039 aa21.88■■□□□ 1.09
TMEFF1-201ENST00000374879 MUTP22033 750 aa21.88■■□□□ 1.09
TMEFF1-201ENST00000374879 KRT17Q04695 432 aa21.88■■□□□ 1.09
TMEFF1-201ENST00000374879 TTLL12Q14166 644 aaPredicted RBP21.88■■□□□ 1.09
TMEFF1-201ENST00000374879 SPARCL1Q14515 664 aa21.88■■□□□ 1.09
TMEFF1-201ENST00000374879 MCUR1Q96AQ8 359 aa21.88■■□□□ 1.09
TMEFF1-201ENST00000374879 ASIC3Q9UHC3 531 aa21.88■■□□□ 1.09
TMEFF1-201ENST00000374879 CHORDC1Q9UHD1 332 aaPredicted RBP21.88■■□□□ 1.09
TMEFF1-201ENST00000374879 MIF4GDA9UHW6 222 aaKnown RBP21.88■■□□□ 1.09
TMEFF1-201ENST00000374879 AKAP3O75969 853 aa21.88■■□□□ 1.09
TMEFF1-201ENST00000374879 TSPY3P0CV98 308 aa21.88■■□□□ 1.09
TMEFF1-201ENST00000374879 TSPY8P0CW00 308 aa21.88■■□□□ 1.09
TMEFF1-201ENST00000374879 SOX5P35711 763 aa21.88■■□□□ 1.09
TMEFF1-201ENST00000374879 PDK4Q16654 411 aa21.88■■□□□ 1.09
TMEFF1-201ENST00000374879 Q4G0T1 1027 aa21.88■■□□□ 1.09
TMEFF1-201ENST00000374879 SLC13A5Q86YT5 568 aaPredicted RBP21.88■■□□□ 1.09
TMEFF1-201ENST00000374879 VPS52Q8N1B4 723 aa21.88■■□□□ 1.09
TMEFF1-201ENST00000374879 SPIRE2Q8WWL2 714 aa21.88■■□□□ 1.09
TMEFF1-201ENST00000374879 CCDC28BQ9BUN5 200 aa21.88■■□□□ 1.09
TMEFF1-201ENST00000374879 RAB34Q9BZG1 259 aa21.88■■□□□ 1.09
TMEFF1-201ENST00000374879 MIS12Q9H081 205 aa21.88■■□□□ 1.09
TMEFF1-201ENST00000374879 MTUS1Q9ULD2 1270 aa21.88■■□□□ 1.09
TMEFF1-201ENST00000374879 MAST2Q6P0Q8 1798 aa21.87■■□□□ 1.09
TMEFF1-201ENST00000374879 EDIL3O43854 480 aa21.87■■□□□ 1.09
TMEFF1-201ENST00000374879 RNASEH1O60930 286 aaKnown RBP21.87■■□□□ 1.09
TMEFF1-201ENST00000374879 TMCC1O94876 653 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms