RNA–Protein interactions for RNA: ENST00000325327.3

LMNB2-201, Transcript of lamin B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB2, Length 4,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-201ENST00000325327 SRGAP2O75044 1071 aa17.84■□□□□ 0.45
LMNB2-201ENST00000325327 CD4P01730 458 aa17.84■□□□□ 0.45
LMNB2-201ENST00000325327 SEPT8Q92599 483 aa17.84■□□□□ 0.45
LMNB2-201ENST00000325327 GMLQ99445 158 aa17.84■□□□□ 0.45
LMNB2-201ENST00000325327 HES2Q9Y543 173 aa17.84■□□□□ 0.45
LMNB2-201ENST00000325327 PTGER2P43116 358 aa17.84■□□□□ 0.45
LMNB2-201ENST00000325327 FUT2Q10981 343 aa17.84■□□□□ 0.45
LMNB2-201ENST00000325327 BBS5Q8N3I7 341 aa17.84■□□□□ 0.45
LMNB2-201ENST00000325327 BHMTQ93088 406 aa17.84■□□□□ 0.45
LMNB2-201ENST00000325327 AKAP3O75969 853 aa17.83■□□□□ 0.45
LMNB2-201ENST00000325327 ATF2P15336 505 aa17.83■□□□□ 0.45
LMNB2-201ENST00000325327 ZBTB16Q05516 673 aa17.83■□□□□ 0.45
LMNB2-201ENST00000325327 WHAMMP3Q1A5X7 153 aa17.83■□□□□ 0.45
LMNB2-201ENST00000325327 MPZL3Q6UWV2 235 aa17.83■□□□□ 0.45
LMNB2-201ENST00000325327 PDCD6IPQ8WUM4 868 aaKnown RBP17.83■□□□□ 0.45
LMNB2-201ENST00000325327 TBC1D31Q96DN5 1066 aa17.83■□□□□ 0.45
LMNB2-201ENST00000325327 BLOC1S4Q9NUP1 217 aa17.83■□□□□ 0.45
LMNB2-201ENST00000325327 SLC38A7Q9NVC3 462 aa17.83■□□□□ 0.45
LMNB2-201ENST00000325327 GOLGA6L7A0A1B0GV03 622 aa17.83■□□□□ 0.44
LMNB2-201ENST00000325327 ZBTB48P10074 688 aaPredicted RBP17.83■□□□□ 0.44
LMNB2-201ENST00000325327 SLC12A2P55011 1212 aa17.83■□□□□ 0.44
LMNB2-201ENST00000325327 RHOT2Q8IXI1 618 aa17.83■□□□□ 0.44
LMNB2-201ENST00000325327 ZNF564Q8TBZ8 553 aaPredicted RBP17.83■□□□□ 0.44
LMNB2-201ENST00000325327 DHX35Q9H5Z1 703 aaKnown RBP17.83■□□□□ 0.44
LMNB2-201ENST00000325327 LIMA1Q9UHB6 759 aaKnown RBP17.83■□□□□ 0.44
LMNB2-201ENST00000325327 CCDC85CA6NKD9 419 aa17.83■□□□□ 0.44
LMNB2-201ENST00000325327 SARNPP82979 210 aaKnown RBP17.83■□□□□ 0.44
LMNB2-201ENST00000325327 CRHR2Q13324 411 aa17.83■□□□□ 0.44
LMNB2-201ENST00000325327 GLIS3Q8NEA6 775 aa17.83■□□□□ 0.44
LMNB2-201ENST00000325327 SEMA6BQ9H3T3 888 aa17.83■□□□□ 0.44
LMNB2-201ENST00000325327 DPP3Q9NY33 737 aa17.83■□□□□ 0.44
LMNB2-201ENST00000325327 CDC23Q9UJX2 597 aa17.83■□□□□ 0.44
LMNB2-201ENST00000325327 SLC16A3O15427 465 aaKnown RBP17.83■□□□□ 0.44
LMNB2-201ENST00000325327 FGGP02679 453 aa17.83■□□□□ 0.44
LMNB2-201ENST00000325327 GRK4P32298 578 aa17.83■□□□□ 0.44
LMNB2-201ENST00000325327 YWHAGP61981 247 aaKnown RBP eCLIP17.83■□□□□ 0.44
LMNB2-201ENST00000325327 IRX2Q9BZI1 471 aaPredicted RBP17.83■□□□□ 0.44
LMNB2-201ENST00000325327 STAP1Q9ULZ2 295 aa17.83■□□□□ 0.44
LMNB2-201ENST00000325327 PGRMC1O00264 195 aaKnown RBP17.82■□□□□ 0.44
LMNB2-201ENST00000325327 TUBBP07437 444 aa17.82■□□□□ 0.44
LMNB2-201ENST00000325327 PLTPP55058 493 aa17.82■□□□□ 0.44
LMNB2-201ENST00000325327 PDXDC1Q6P996 788 aa17.82■□□□□ 0.44
LMNB2-201ENST00000325327 C1orf228Q6PIY5 440 aa17.82■□□□□ 0.44
LMNB2-201ENST00000325327 NT5C1AQ9BXI3 368 aa17.82■□□□□ 0.44
LMNB2-201ENST00000325327 TMEM8AQ9HCN3 771 aa17.82■□□□□ 0.44
LMNB2-201ENST00000325327 NCK2O43639 380 aa17.82■□□□□ 0.44
LMNB2-201ENST00000325327 PSMD10O75832 226 aa17.82■□□□□ 0.44
LMNB2-201ENST00000325327 DENND2CQ68D51 928 aa17.82■□□□□ 0.44
LMNB2-201ENST00000325327 SPOPLQ6IQ16 392 aa17.82■□□□□ 0.44
LMNB2-201ENST00000325327 SKA2Q8WVK7 121 aaPredicted RBP17.82■□□□□ 0.44
LMNB2-201ENST00000325327 C18orf8Q96DM3 657 aa17.82■□□□□ 0.44
LMNB2-201ENST00000325327 KLHL11Q9NVR0 708 aa17.82■□□□□ 0.44
LMNB2-201ENST00000325327 SAMD15Q9P1V8 674 aa17.82■□□□□ 0.44
LMNB2-201ENST00000325327 UBIAD1Q9Y5Z9 338 aa17.82■□□□□ 0.44
LMNB2-201ENST00000325327 CALB1P05937 261 aa17.82■□□□□ 0.44
LMNB2-201ENST00000325327 GNL1P36915 607 aaPredicted RBP17.82■□□□□ 0.44
LMNB2-201ENST00000325327 MMS22LQ6ZRQ5 1243 aa17.82■□□□□ 0.44
LMNB2-201ENST00000325327 ENOSF1Q7L5Y1 443 aa17.82■□□□□ 0.44
LMNB2-201ENST00000325327 UBQLN1Q9UMX0 589 aaKnown RBP17.82■□□□□ 0.44
LMNB2-201ENST00000325327 SCP2P22307 547 aa17.81■□□□□ 0.44
LMNB2-201ENST00000325327 TAF6P49848 677 aa17.81■□□□□ 0.44
LMNB2-201ENST00000325327 EPHB1P54762 984 aa17.81■□□□□ 0.44
LMNB2-201ENST00000325327 RWDD2BP57060 319 aa17.81■□□□□ 0.44
LMNB2-201ENST00000325327 HDXQ7Z353 690 aa17.81■□□□□ 0.44
LMNB2-201ENST00000325327 MTMR9Q96QG7 549 aa17.81■□□□□ 0.44
LMNB2-201ENST00000325327 AGPAT1Q99943 283 aa17.81■□□□□ 0.44
LMNB2-201ENST00000325327 STMN4Q9H169 189 aaPredicted RBP17.81■□□□□ 0.44
LMNB2-201ENST00000325327 COL20A1Q9P218 1284 aa17.81■□□□□ 0.44
LMNB2-201ENST00000325327 STRIP2Q9ULQ0 834 aa17.81■□□□□ 0.44
LMNB2-201ENST00000325327 JRKLQ9Y4A0 524 aa17.81■□□□□ 0.44
LMNB2-201ENST00000325327 PHRF1Q9P1Y6 1649 aaKnown RBP17.81■□□□□ 0.44
LMNB2-201ENST00000325327 KCNA3P22001 575 aa17.81■□□□□ 0.44
LMNB2-201ENST00000325327 C2orf54Q08AI8 447 aa17.81■□□□□ 0.44
LMNB2-201ENST00000325327 ITGB3BPQ13352 177 aaPredicted RBP17.81■□□□□ 0.44
LMNB2-201ENST00000325327 TAF2Q6P1X5 1199 aa17.81■□□□□ 0.44
LMNB2-201ENST00000325327 TAS1R2Q8TE23 839 aa17.81■□□□□ 0.44
LMNB2-201ENST00000325327 IL18RAPO95256 599 aa17.81■□□□□ 0.44
LMNB2-201ENST00000325327 BRD2P25440 801 aaKnown RBP17.81■□□□□ 0.44
LMNB2-201ENST00000325327 KIAA1755Q5JYT7 1200 aa17.81■□□□□ 0.44
LMNB2-201ENST00000325327 C10orf76Q5T2E6 689 aa17.81■□□□□ 0.44
LMNB2-201ENST00000325327 TMC7Q7Z402 723 aa17.81■□□□□ 0.44
LMNB2-201ENST00000325327 ANKRD23Q86SG2 305 aa17.81■□□□□ 0.44
LMNB2-201ENST00000325327 ZBTB10Q96DT7 871 aa17.81■□□□□ 0.44
LMNB2-201ENST00000325327 NIF3L1Q9GZT8 377 aa17.81■□□□□ 0.44
LMNB2-201ENST00000325327 NKIRAS1Q9NYS0 192 aa17.81■□□□□ 0.44
LMNB2-201ENST00000325327 KPNA6O60684 536 aa17.81■□□□□ 0.44
LMNB2-201ENST00000325327 THP07101 528 aa17.81■□□□□ 0.44
LMNB2-201ENST00000325327 CYP3A4P08684 503 aa17.81■□□□□ 0.44
LMNB2-201ENST00000325327 SNHG28P0DPA3 235 aa17.81■□□□□ 0.44
LMNB2-201ENST00000325327 GTF2H1P32780 548 aa17.81■□□□□ 0.44
LMNB2-201ENST00000325327 TSTA3Q13630 321 aaPredicted RBP17.81■□□□□ 0.44
LMNB2-201ENST00000325327 CLUL1Q15846 466 aa17.81■□□□□ 0.44
LMNB2-201ENST00000325327 GRK7Q8WTQ7 553 aa17.81■□□□□ 0.44
LMNB2-201ENST00000325327 A0A1B0GTH6 734 aa17.8■□□□□ 0.44
LMNB2-201ENST00000325327 ATMINO43313 823 aaPredicted RBP17.8■□□□□ 0.44
LMNB2-201ENST00000325327 ZBED1O96006 694 aa17.8■□□□□ 0.44
LMNB2-201ENST00000325327 SRGAP2BP0DMP2 458 aa17.8■□□□□ 0.44
LMNB2-201ENST00000325327 GUCY2CP25092 1073 aa17.8■□□□□ 0.44
LMNB2-201ENST00000325327 PMS1P54277 932 aaKnown RBP17.8■□□□□ 0.44
LMNB2-201ENST00000325327 AFDNP55196 1824 aaKnown RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms