RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 LONRF1Q17RB8 773 aa8.65□□□□□ -1.02
APOB-201ENST00000233242 IRGCQ6NXR0 463 aa8.65□□□□□ -1.02
APOB-201ENST00000233242 AGPAT1Q99943 283 aa8.65□□□□□ -1.02
APOB-201ENST00000233242 NGRNQ9NPE2 291 aaKnown RBP8.65□□□□□ -1.02
APOB-201ENST00000233242 PI4K2BG5E9Z4 385 aa8.65□□□□□ -1.02
APOB-201ENST00000233242 APOL1O14791 398 aa8.65□□□□□ -1.02
APOB-201ENST00000233242 FAM200BP0CF97 657 aa8.65□□□□□ -1.02
APOB-201ENST00000233242 DMC1Q14565 340 aa8.65□□□□□ -1.02
APOB-201ENST00000233242 GRM4Q14833 912 aa8.65□□□□□ -1.02
APOB-201ENST00000233242 TXNRD1Q16881 649 aa8.65□□□□□ -1.02
APOB-201ENST00000233242 DDX42Q86XP3 938 aaKnown RBP eCLIP8.65□□□□□ -1.02
APOB-201ENST00000233242 KCND1Q9NSA2 647 aa8.65□□□□□ -1.02
APOB-201ENST00000233242 WDR35Q9P2L0 1181 aa8.65□□□□□ -1.02
APOB-201ENST00000233242 TRPC5OSA6NMA1 111 aa8.65□□□□□ -1.02
APOB-201ENST00000233242 MYO1DO94832 1006 aa8.65□□□□□ -1.02
APOB-201ENST00000233242 SWT1Q5T5J6 900 aaKnown RBP8.65□□□□□ -1.02
APOB-201ENST00000233242 NDUFAF2Q8N183 169 aa8.65□□□□□ -1.02
APOB-201ENST00000233242 C1orf54Q8WWF1 131 aa8.65□□□□□ -1.02
APOB-201ENST00000233242 PRDM4Q9UKN5 801 aa8.65□□□□□ -1.02
APOB-201ENST00000233242 NEU2Q9Y3R4 380 aa8.65□□□□□ -1.02
APOB-201ENST00000233242 SASH1O94885 1247 aa8.65□□□□□ -1.02
APOB-201ENST00000233242 FAM160B2Q86V87 743 aa8.65□□□□□ -1.02
APOB-201ENST00000233242 ARHGEF1Q92888 912 aaKnown RBP8.65□□□□□ -1.02
APOB-201ENST00000233242 FRMD8P1Q9BZ68 369 aaPredicted RBP8.65□□□□□ -1.02
APOB-201ENST00000233242 IRX2Q9BZI1 471 aaPredicted RBP8.65□□□□□ -1.02
APOB-201ENST00000233242 BARHL2Q9NY43 387 aa8.65□□□□□ -1.02
APOB-201ENST00000233242 WHRNQ9P202 907 aa8.65□□□□□ -1.02
APOB-201ENST00000233242 CHMP2BQ9UQN3 213 aa8.65□□□□□ -1.02
APOB-201ENST00000233242 PSMC3P17980 439 aa8.65□□□□□ -1.02
APOB-201ENST00000233242 PRELPP51888 382 aa8.65□□□□□ -1.02
APOB-201ENST00000233242 PPP6R3Q5H9R7 873 aaPredicted RBP8.65□□□□□ -1.02
APOB-201ENST00000233242 PPP2R3CQ969Q6 453 aa8.65□□□□□ -1.02
APOB-201ENST00000233242 TRIM62Q9BVG3 475 aa8.65□□□□□ -1.02
APOB-201ENST00000233242 POTECB2RU33 542 aa8.65□□□□□ -1.02
APOB-201ENST00000233242 INO80B-WBP1J3KQ70 363 aa8.65□□□□□ -1.02
APOB-201ENST00000233242 CD58P19256 250 aa8.65□□□□□ -1.02
APOB-201ENST00000233242 SERPINB8P50452 374 aa8.65□□□□□ -1.02
APOB-201ENST00000233242 C11orf70Q9BRQ4 267 aa8.65□□□□□ -1.02
APOB-201ENST00000233242 INO80BQ9C086 356 aaPredicted RBP8.65□□□□□ -1.02
APOB-201ENST00000233242 NEUROG2Q9H2A3 272 aa8.65□□□□□ -1.02
APOB-201ENST00000233242 PJA2O43164 708 aa8.65□□□□□ -1.02
APOB-201ENST00000233242 NXF1Q9UBU9 619 aaKnown RBP8.65□□□□□ -1.02
APOB-201ENST00000233242 GON4LQ3T8J9 2241 aa8.65□□□□□ -1.03
APOB-201ENST00000233242 PLEKHA8P1O95397 391 aa8.65□□□□□ -1.03
APOB-201ENST00000233242 ATP6V1G2O95670 118 aa8.65□□□□□ -1.03
APOB-201ENST00000233242 SCP2P22307 547 aa8.65□□□□□ -1.03
APOB-201ENST00000233242 CEBPAP49715 358 aaPredicted RBP8.65□□□□□ -1.03
APOB-201ENST00000233242 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.65□□□□□ -1.03
APOB-201ENST00000233242 ZNF699Q32M78 642 aa8.65□□□□□ -1.03
APOB-201ENST00000233242 REXO1L1PQ8IX06 675 aa8.65□□□□□ -1.03
APOB-201ENST00000233242 RNF25Q96BH1 459 aaPredicted RBP8.65□□□□□ -1.03
APOB-201ENST00000233242 FAM167AQ96KS9 214 aa8.65□□□□□ -1.03
APOB-201ENST00000233242 TIPINQ9BVW5 301 aa8.65□□□□□ -1.03
APOB-201ENST00000233242 BRD8Q9H0E9 1235 aa8.65□□□□□ -1.03
APOB-201ENST00000233242 TNFAIP2Q03169 654 aa8.65□□□□□ -1.03
APOB-201ENST00000233242 PADI6Q6TGC4 694 aa8.65□□□□□ -1.03
APOB-201ENST00000233242 SCUBE1Q8IWY4 988 aa8.65□□□□□ -1.03
APOB-201ENST00000233242 MICU2Q8IYU8 434 aa8.65□□□□□ -1.03
APOB-201ENST00000233242 RIN3Q8TB24 985 aa8.65□□□□□ -1.03
APOB-201ENST00000233242 RIN2Q8WYP3 895 aaPredicted RBP8.65□□□□□ -1.03
APOB-201ENST00000233242 MAGEA4P43358 317 aa8.65□□□□□ -1.03
APOB-201ENST00000233242 CSTF3Q12996 717 aaKnown RBP8.65□□□□□ -1.03
APOB-201ENST00000233242 SNRNP27Q8WVK2 155 aaKnown RBP8.65□□□□□ -1.03
APOB-201ENST00000233242 CHP1Q99653 195 aa8.65□□□□□ -1.03
APOB-201ENST00000233242 RUBCNLQ9H714 662 aa8.65□□□□□ -1.03
APOB-201ENST00000233242 K7ERI5 159 aa8.64□□□□□ -1.03
APOB-201ENST00000233242 SRP72O76094 671 aaKnown RBP8.64□□□□□ -1.03
APOB-201ENST00000233242 ZNF18P17022 549 aa8.64□□□□□ -1.03
APOB-201ENST00000233242 PSMA4P25789 261 aaKnown RBP8.64□□□□□ -1.03
APOB-201ENST00000233242 CIITAP33076 1130 aa8.64□□□□□ -1.03
APOB-201ENST00000233242 PROSER3Q2NL68 480 aa8.64□□□□□ -1.03
APOB-201ENST00000233242 C4orf50Q6ZRC1 276 aa8.64□□□□□ -1.03
APOB-201ENST00000233242 RYBPQ8N488 228 aaPredicted RBP8.64□□□□□ -1.03
APOB-201ENST00000233242 RSPH1Q8WYR4 309 aa8.64□□□□□ -1.03
APOB-201ENST00000233242 TRIM51Q9BSJ1 452 aa8.64□□□□□ -1.03
APOB-201ENST00000233242 APEX2Q9UBZ4 518 aa8.64□□□□□ -1.03
APOB-201ENST00000233242 AHCYL1O43865 530 aa8.64□□□□□ -1.03
APOB-201ENST00000233242 ACTR2P61160 394 aa8.64□□□□□ -1.03
APOB-201ENST00000233242 NCAPG2Q86XI2 1143 aa8.64□□□□□ -1.03
APOB-201ENST00000233242 PUS3Q9BZE2 481 aaKnown RBP8.64□□□□□ -1.03
APOB-201ENST00000233242 GRID1Q9ULK0 1009 aa8.64□□□□□ -1.03
APOB-201ENST00000233242 TBKBP1A7MCY6 615 aa8.64□□□□□ -1.03
APOB-201ENST00000233242 ERVV-1B6SEH8 477 aa8.64□□□□□ -1.03
APOB-201ENST00000233242 ZBTB24O43167 697 aaPredicted RBP8.64□□□□□ -1.03
APOB-201ENST00000233242 ALBP02768 609 aa8.64□□□□□ -1.03
APOB-201ENST00000233242 HMOX2P30519 316 aa8.64□□□□□ -1.03
APOB-201ENST00000233242 STX5Q13190 355 aa8.64□□□□□ -1.03
APOB-201ENST00000233242 ANGPTL8Q6UXH0 198 aa8.64□□□□□ -1.03
APOB-201ENST00000233242 LRRC34Q8IZ02 419 aa8.64□□□□□ -1.03
APOB-201ENST00000233242 MS4A14Q96JA4 679 aa8.64□□□□□ -1.03
APOB-201ENST00000233242 ATXN2Q99700 1313 aaKnown RBP8.64□□□□□ -1.03
APOB-201ENST00000233242 CPDO75976 1380 aa8.64□□□□□ -1.03
APOB-201ENST00000233242 XPO1O14980 1071 aaKnown RBP8.64□□□□□ -1.03
APOB-201ENST00000233242 BMP3P12645 472 aa8.64□□□□□ -1.03
APOB-201ENST00000233242 FXR1P51114 621 aaKnown RBP eCLIP8.64□□□□□ -1.03
APOB-201ENST00000233242 IMPG1Q17R60 797 aa8.64□□□□□ -1.03
APOB-201ENST00000233242 SPDYCQ5MJ68 293 aa8.64□□□□□ -1.03
APOB-201ENST00000233242 CLEC4FQ8N1N0 589 aa8.64□□□□□ -1.03
APOB-201ENST00000233242 MMADHCQ9H3L0 296 aaPredicted RBP8.64□□□□□ -1.03
APOB-201ENST00000233242 ATAD3AQ9NVI7 634 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms