RNA–Protein interactions for RNA: YPL257W-B

YPL257W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YPL257W-B, Length 5,268 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPL257W-BYPL257W-B SWD3P38123 315 aa2.39□□□□□ -2.03
YPL257W-BYPL257W-B YBL029WP38201 376 aa2.39□□□□□ -2.03
YPL257W-BYPL257W-B SVP26P38869 228 aa2.39□□□□□ -2.03
YPL257W-BYPL257W-B GPP2P40106 250 aaKnown RBP2.39□□□□□ -2.03
YPL257W-BYPL257W-B YGR149WP48236 432 aa2.39□□□□□ -2.03
YPL257W-BYPL257W-B BUL1P48524 976 aa2.39□□□□□ -2.03
YPL257W-BYPL257W-B NUP57P48837 541 aa2.39□□□□□ -2.03
YPL257W-BYPL257W-B TOS8P53147 276 aa2.39□□□□□ -2.03
YPL257W-BYPL257W-B YLR152CP54072 576 aa2.39□□□□□ -2.03
YPL257W-BYPL257W-B PIR3Q03180 325 aa2.39□□□□□ -2.03
YPL257W-BYPL257W-B YML079WQ03629 201 aa2.39□□□□□ -2.03
YPL257W-BYPL257W-B ERF2Q06551 359 aa2.39□□□□□ -2.03
YPL257W-BYPL257W-B SNX3Q08826 162 aaKnown RBP2.39□□□□□ -2.03
YPL257W-BYPL257W-B ACM1Q08981 209 aa2.39□□□□□ -2.03
YPL257W-BYPL257W-B DCS2Q12123 353 aa2.39□□□□□ -2.03
YPL257W-BYPL257W-B TFC7Q12415 435 aa2.39□□□□□ -2.03
YPL257W-BYPL257W-B RDI1Q12434 202 aa2.39□□□□□ -2.03
YPL257W-BYPL257W-B ERD2P18414 219 aa2.38□□□□□ -2.03
YPL257W-BYPL257W-B FTH1P38310 465 aa2.38□□□□□ -2.03
YPL257W-BYPL257W-B SSH1P38353 490 aaKnown RBP2.38□□□□□ -2.03
YPL257W-BYPL257W-B PSD1P39006 500 aa2.38□□□□□ -2.03
YPL257W-BYPL257W-B SIT1P39980 628 aa2.38□□□□□ -2.03
YPL257W-BYPL257W-B VHR1P40522 640 aa2.38□□□□□ -2.03
YPL257W-BYPL257W-B HIS6P40545 261 aa2.38□□□□□ -2.03
YPL257W-BYPL257W-B STE24P47154 453 aa2.38□□□□□ -2.03
YPL257W-BYPL257W-B DIA1P54005 336 aa2.38□□□□□ -2.03
YPL257W-BYPL257W-B COA4Q05809 96 aa2.38□□□□□ -2.03
YPL257W-BYPL257W-B CTS2Q06350 511 aa2.38□□□□□ -2.03
YPL257W-BYPL257W-B MRX9Q07349 420 aaKnown RBP2.38□□□□□ -2.03
YPL257W-BYPL257W-B FRE8Q12209 686 aa2.38□□□□□ -2.03
YPL257W-BYPL257W-B RNH203Q12338 110 aa2.38□□□□□ -2.03
YPL257W-BYPL257W-B COX1P00401 534 aa2.38□□□□□ -2.03
YPL257W-BYPL257W-B RPL9AP05738 191 aaKnown RBP2.38□□□□□ -2.03
YPL257W-BYPL257W-B CNE1P27825 502 aa2.38□□□□□ -2.03
YPL257W-BYPL257W-B UGX2P32772 223 aa2.38□□□□□ -2.03
YPL257W-BYPL257W-B MGM101P32787 269 aaKnown RBP2.38□□□□□ -2.03
YPL257W-BYPL257W-B TIF3P34167 436 aaKnown RBP2.38□□□□□ -2.03
YPL257W-BYPL257W-B SET3P36124 751 aa2.38□□□□□ -2.03
YPL257W-BYPL257W-B SIM1P40472 476 aa2.38□□□□□ -2.03
YPL257W-BYPL257W-B XPT1P47165 209 aa2.38□□□□□ -2.03
YPL257W-BYPL257W-B HST3P53687 447 aa2.38□□□□□ -2.03
YPL257W-BYPL257W-B RHO5P53879 331 aaKnown RBP2.38□□□□□ -2.03
YPL257W-BYPL257W-B CWC27Q02770 301 aa2.38□□□□□ -2.03
YPL257W-BYPL257W-B RSM28Q03430 361 aa2.38□□□□□ -2.03
YPL257W-BYPL257W-B PPT2Q12036 173 aa2.38□□□□□ -2.03
YPL257W-BYPL257W-B SAC1P32368 623 aaKnown RBP2.38□□□□□ -2.03
YPL257W-BYPL257W-B YKL063CP35725 167 aa2.38□□□□□ -2.03
YPL257W-BYPL257W-B PUG1P40100 303 aa2.38□□□□□ -2.03
YPL257W-BYPL257W-B AGX1P43567 385 aa2.38□□□□□ -2.03
YPL257W-BYPL257W-B HAM1P47119 197 aaKnown RBP2.38□□□□□ -2.03
YPL257W-BYPL257W-B YPL077CQ02831 240 aa2.38□□□□□ -2.03
YPL257W-BYPL257W-B TVP15Q03860 143 aa2.38□□□□□ -2.03
YPL257W-BYPL257W-B PKR1Q03880 122 aaKnown RBP2.38□□□□□ -2.03
YPL257W-BYPL257W-B ATC1Q04005 294 aa2.38□□□□□ -2.03
YPL257W-BYPL257W-B THI72Q08579 599 aa2.38□□□□□ -2.03
YPL257W-BYPL257W-B ALG6Q12001 544 aaKnown RBP2.38□□□□□ -2.03
YPL257W-BYPL257W-B TIR4Q12218 487 aaPredicted RBP2.38□□□□□ -2.03
YPL257W-BYPL257W-B SNF8Q12483 233 aa2.38□□□□□ -2.03
YPL257W-BYPL257W-B RRP7P25368 297 aaPredicted RBP2.38□□□□□ -2.03
YPL257W-BYPL257W-B EHD3P28817 500 aa2.38□□□□□ -2.03
YPL257W-BYPL257W-B PTR2P32901 601 aa2.38□□□□□ -2.03
YPL257W-BYPL257W-B DAD2P36162 133 aa2.38□□□□□ -2.03
YPL257W-BYPL257W-B HEK2P38199 381 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
YPL257W-BYPL257W-B RRP4P38792 359 aaKnown RBP2.38□□□□□ -2.03
YPL257W-BYPL257W-B SMB1P40018 196 aaKnown RBP2.38□□□□□ -2.03
YPL257W-BYPL257W-B SDS23P53172 527 aa2.38□□□□□ -2.03
YPL257W-BYPL257W-B PMP3P87284 55 aa2.38□□□□□ -2.03
YPL257W-BYPL257W-B DST1P07273 309 aa2.37□□□□□ -2.03
YPL257W-BYPL257W-B IMA3P0CW40 589 aa2.37□□□□□ -2.03
YPL257W-BYPL257W-B IMA4P0CW41 589 aa2.37□□□□□ -2.03
YPL257W-BYPL257W-B FUS3P16892 353 aaKnown RBP2.37□□□□□ -2.03
YPL257W-BYPL257W-B SPO11P23179 398 aa2.37□□□□□ -2.03
YPL257W-BYPL257W-B SCO1P23833 295 aa2.37□□□□□ -2.03
YPL257W-BYPL257W-B RNP1P32385 249 aa2.37□□□□□ -2.03
YPL257W-BYPL257W-B MRPS5P33759 307 aa2.37□□□□□ -2.03
YPL257W-BYPL257W-B SHE1P38200 338 aa2.37□□□□□ -2.03
YPL257W-BYPL257W-B OM14P38325 134 aa2.37□□□□□ -2.03
YPL257W-BYPL257W-B SET5P38890 526 aaKnown RBP2.37□□□□□ -2.03
YPL257W-BYPL257W-B SEC72P39742 193 aaKnown RBP2.37□□□□□ -2.03
YPL257W-BYPL257W-B NSA2P40078 261 aaKnown RBP2.37□□□□□ -2.03
YPL257W-BYPL257W-B AMA1P50082 593 aa2.37□□□□□ -2.03
YPL257W-BYPL257W-B MGA1P53050 456 aa2.37□□□□□ -2.03
YPL257W-BYPL257W-B VPS28Q02767 242 aa2.37□□□□□ -2.03
YPL257W-BYPL257W-B ROT1Q03691 256 aa2.37□□□□□ -2.03
YPL257W-BYPL257W-B YMR155WQ03795 547 aa2.37□□□□□ -2.03
YPL257W-BYPL257W-B VBA1Q04301 562 aa2.37□□□□□ -2.03
YPL257W-BYPL257W-B DTD1Q07648 150 aaKnown RBP2.37□□□□□ -2.03
YPL257W-BYPL257W-B IZH3Q07959 543 aa2.37□□□□□ -2.03
YPL257W-BYPL257W-B IMA2Q08295 589 aa2.37□□□□□ -2.03
YPL257W-BYPL257W-B CSM4Q08955 156 aa2.37□□□□□ -2.03
YPL257W-BYPL257W-B PAA1Q12447 191 aaKnown RBP2.37□□□□□ -2.03
YPL257W-BYPL257W-B RAX2Q12465 1220 aa2.37□□□□□ -2.03
YPL257W-BYPL257W-B SUS1Q6WNK7 96 aa2.37□□□□□ -2.03
YPL257W-BYPL257W-B MIR1P23641 311 aaKnown RBP2.37□□□□□ -2.03
YPL257W-BYPL257W-B PHD1P36093 366 aa2.37□□□□□ -2.03
YPL257W-BYPL257W-B TRM5P38793 499 aa2.37□□□□□ -2.03
YPL257W-BYPL257W-B HXT14P42833 540 aa2.37□□□□□ -2.03
YPL257W-BYPL257W-B SUT1P53032 299 aaKnown RBP2.37□□□□□ -2.03
YPL257W-BYPL257W-B ARO8P53090 500 aaKnown RBP2.37□□□□□ -2.03
YPL257W-BYPL257W-B NCE103P53615 221 aa2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 141.3 ms