RNA–Protein interactions for RNA: YMR173W

DDR48, Transcript of DNA damage-responsive protein, yeastyeast

Gene DDR48, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDR48YMR173W YMR114CQ04471 368 aaKnown RBP1.27□□□□□ -2.21
DDR48YMR173W BOL1Q3E793 110 aa1.27□□□□□ -2.21
DDR48YMR173W YOS9Q99220 542 aa1.27□□□□□ -2.21
DDR48YMR173W RPP0P05317 312 aaKnown RBP1.26□□□□□ -2.21
DDR48YMR173W RPL4AP10664 362 aaKnown RBP1.26□□□□□ -2.21
DDR48YMR173W POF1P25576 258 aa1.26□□□□□ -2.21
DDR48YMR173W YCR102CP25608 368 aa1.26□□□□□ -2.21
DDR48YMR173W DAL80P26343 269 aa1.26□□□□□ -2.21
DDR48YMR173W YKL070WP36087 169 aa1.26□□□□□ -2.21
DDR48YMR173W AYR1P40471 297 aa1.26□□□□□ -2.21
DDR48YMR173W MRX5P47007 382 aa1.26□□□□□ -2.21
DDR48YMR173W RPL4BP49626 362 aaKnown RBP1.26□□□□□ -2.21
DDR48YMR173W NBP35P52920 328 aa1.26□□□□□ -2.21
DDR48YMR173W LSB1P53281 241 aa1.26□□□□□ -2.21
DDR48YMR173W DAD3P69850 94 aa1.26□□□□□ -2.21
DDR48YMR173W CDC14Q00684 551 aa1.26□□□□□ -2.21
DDR48YMR173W EGD1Q02642 157 aaKnown RBP1.26□□□□□ -2.21
DDR48YMR173W ARV1Q06541 321 aa1.26□□□□□ -2.21
DDR48YMR173W FMP16Q12497 93 aa1.26□□□□□ -2.21
DDR48YMR173W AI5_BETAQ9ZZX0 354 aa1.26□□□□□ -2.21
DDR48YMR173W SCM4P32564 187 aa1.25□□□□□ -2.21
DDR48YMR173W SFC1P33303 322 aa1.25□□□□□ -2.21
DDR48YMR173W GDH2P33327 1092 aaKnown RBP1.25□□□□□ -2.21
DDR48YMR173W PET100P38958 111 aa1.25□□□□□ -2.21
DDR48YMR173W NPT1P39683 429 aaKnown RBP1.25□□□□□ -2.21
DDR48YMR173W NIF3P53081 288 aa1.25□□□□□ -2.21
DDR48YMR173W TIM21P53220 239 aa1.25□□□□□ -2.21
DDR48YMR173W SWS2P53937 143 aa1.25□□□□□ -2.21
DDR48YMR173W SPP2Q02521 185 aa1.25□□□□□ -2.21
DDR48YMR173W PER33Q12144 273 aa1.25□□□□□ -2.21
DDR48YMR173W YPL247CQ12523 523 aa1.25□□□□□ -2.21
DDR48YMR173W DPB2P24482 689 aaPredicted RBP1.24□□□□□ -2.21
DDR48YMR173W HSM3P38348 480 aa1.24□□□□□ -2.21
DDR48YMR173W TEM1P38987 245 aa1.24□□□□□ -2.21
DDR48YMR173W SHC1P39000 512 aa1.24□□□□□ -2.21
DDR48YMR173W AGX1P43567 385 aa1.24□□□□□ -2.21
DDR48YMR173W GON7P46984 123 aa1.24□□□□□ -2.21
DDR48YMR173W YJL118WP47022 219 aa1.24□□□□□ -2.21
DDR48YMR173W MNT4P53745 580 aa1.24□□□□□ -2.21
DDR48YMR173W ERV25P54837 211 aaKnown RBP1.24□□□□□ -2.21
DDR48YMR173W ATC1Q04005 294 aa1.24□□□□□ -2.21
DDR48YMR173W PEX12Q04370 399 aa1.24□□□□□ -2.21
DDR48YMR173W SSA3P09435 649 aaKnown RBP1.23□□□□□ -2.21
DDR48YMR173W POX1P13711 748 aa1.23□□□□□ -2.21
DDR48YMR173W YHL049CP38722 271 aa1.23□□□□□ -2.21
DDR48YMR173W PEX18P38855 283 aa1.23□□□□□ -2.21
DDR48YMR173W PRM9P39551 298 aa1.23□□□□□ -2.21
DDR48YMR173W TAD2P47058 250 aa1.23□□□□□ -2.21
DDR48YMR173W YJL028WP47062 111 aa1.23□□□□□ -2.21
DDR48YMR173W MDM34P53083 459 aa1.23□□□□□ -2.21
DDR48YMR173W SLX9P53251 210 aaPredicted RBP1.23□□□□□ -2.21
DDR48YMR173W GEP5Q12393 293 aa1.23□□□□□ -2.21
DDR48YMR173W RAD3P06839 778 aa1.22□□□□□ -2.21
DDR48YMR173W MET16P18408 261 aaPredicted RBP1.22□□□□□ -2.21
DDR48YMR173W RNP1P32385 249 aa1.22□□□□□ -2.21
DDR48YMR173W SKI2P35207 1287 aaKnown RBP RIP-Chip data1.22□□□□□ -2.21not detected
DDR48YMR173W MAL32P38158 584 aa1.22□□□□□ -2.21
DDR48YMR173W HEK2P38199 381 aaKnown RBP RIP-Chip data1.22□□□□□ -2.21not detected
DDR48YMR173W MAL12P53341 584 aa1.22□□□□□ -2.21
DDR48YMR173W AAH1P53909 347 aa1.22□□□□□ -2.21
DDR48YMR173W BOP2Q06150 570 aa1.22□□□□□ -2.21
DDR48YMR173W GMC2Q06201 188 aa1.22□□□□□ -2.21
DDR48YMR173W CTR3Q06686 241 aa1.22□□□□□ -2.21
DDR48YMR173W SME1Q12330 94 aaPredicted RBP1.22□□□□□ -2.21
DDR48YMR173W PST1Q12355 444 aa1.22□□□□□ -2.21
DDR48YMR173W FKS1P38631 1876 aaKnown RBP1.22□□□□□ -2.21
DDR48YMR173W CCA1P21269 546 aa1.21□□□□□ -2.22
DDR48YMR173W DOA4P32571 926 aa1.21□□□□□ -2.22
DDR48YMR173W ECM13P38195 257 aa1.21□□□□□ -2.22
DDR48YMR173W YER135CP40082 130 aa1.21□□□□□ -2.22
DDR48YMR173W COA1P40452 197 aa1.21□□□□□ -2.22
DDR48YMR173W KAP114P53067 1004 aa1.21□□□□□ -2.22
DDR48YMR173W MAL13P53338 473 aa1.21□□□□□ -2.22
DDR48YMR173W ASI3P53983 676 aa1.21□□□□□ -2.22
DDR48YMR173W EMI1Q04406 187 aa1.21□□□□□ -2.22
DDR48YMR173W STH1P32597 1359 aa1.21□□□□□ -2.22
DDR48YMR173W RPL24AP04449 155 aaKnown RBP1.2□□□□□ -2.22
DDR48YMR173W PUT1P09368 476 aa1.2□□□□□ -2.22
DDR48YMR173W CWP1P28319 239 aa1.2□□□□□ -2.22
DDR48YMR173W LSM4P40070 187 aaKnown RBP1.2□□□□□ -2.22
DDR48YMR173W PEX10Q05568 337 aa1.2□□□□□ -2.22
DDR48YMR173W SLD7Q08457 257 aa1.2□□□□□ -2.22
DDR48YMR173W SSK22P25390 1331 aaPredicted RBP1.19□□□□□ -2.22
DDR48YMR173W SGA1P08019 549 aa1.19□□□□□ -2.22
DDR48YMR173W RCY1P39531 840 aa1.19□□□□□ -2.22
DDR48YMR173W DDI1P40087 428 aa1.19□□□□□ -2.22
DDR48YMR173W DSN1P40568 576 aa1.19□□□□□ -2.22
DDR48YMR173W OST6Q03723 332 aa1.19□□□□□ -2.22
DDR48YMR173W COX2P00410 251 aa1.18□□□□□ -2.22
DDR48YMR173W HIS1P00498 297 aaKnown RBP1.18□□□□□ -2.22
DDR48YMR173W OM45P16547 393 aa1.18□□□□□ -2.22
DDR48YMR173W RTT105P40063 208 aa1.18□□□□□ -2.22
DDR48YMR173W SNX4P47057 423 aa1.18□□□□□ -2.22
DDR48YMR173W YJR012CP47087 207 aa1.18□□□□□ -2.22
DDR48YMR173W EMC2P47133 292 aaKnown RBP1.18□□□□□ -2.22
DDR48YMR173W GPI8P49018 411 aa1.18□□□□□ -2.22
DDR48YMR173W RSM10Q03201 203 aa1.18□□□□□ -2.22
DDR48YMR173W YPR011CQ12251 326 aa1.18□□□□□ -2.22
DDR48YMR173W EMP46Q12396 444 aa1.18□□□□□ -2.22
DDR48YMR173W YPL119C-AQ3E751 87 aa1.18□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 51 ms