RNA–Protein interactions for RNA: YMR025W

CSI1, Transcript of Subunit of the Cop9 signalosome, yeastyeast

Gene CSI1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSI1YMR025W MRX9Q07349 420 aaKnown RBP1.74□□□□□ -2.13
CSI1YMR025W PBP4Q07362 185 aaKnown RBP1.74□□□□□ -2.13
CSI1YMR025W YLR012CQ07927 99 aa1.74□□□□□ -2.13
CSI1YMR025W FEX1Q08913 375 aa1.74□□□□□ -2.13
CSI1YMR025W FEX2Q08991 375 aa1.74□□□□□ -2.13
CSI1YMR025W MSS116P15424 664 aaKnown RBP1.73□□□□□ -2.13
CSI1YMR025W ERD1P16151 362 aa1.73□□□□□ -2.13
CSI1YMR025W SHQ1P40486 507 aaPredicted RBP1.73□□□□□ -2.13
CSI1YMR025W PNC1P53184 216 aaKnown RBP1.73□□□□□ -2.13
CSI1YMR025W VOA1P53262 265 aa1.73□□□□□ -2.13
CSI1YMR025W NOP13P53883 403 aaKnown RBP RIP-Chip data1.73□□□□□ -2.13not detected
CSI1YMR025W CWC21Q03375 135 aaKnown RBP1.73□□□□□ -2.13
CSI1YMR025W SNX41Q04053 625 aa1.73□□□□□ -2.13
CSI1YMR025W RRG8Q06109 277 aa1.73□□□□□ -2.13
CSI1YMR025W ECM29P38737 1868 aa1.73□□□□□ -2.13
CSI1YMR025W RAD7P06779 565 aa1.72□□□□□ -2.13
CSI1YMR025W FPR1P20081 114 aaKnown RBP1.72□□□□□ -2.13
CSI1YMR025W DBP3P20447 523 aaKnown RBP1.72□□□□□ -2.13
CSI1YMR025W YBR062CP38239 180 aa1.72□□□□□ -2.13
CSI1YMR025W RRF1P38771 230 aa1.72□□□□□ -2.13
CSI1YMR025W SOP4P39543 234 aaPredicted RBP1.72□□□□□ -2.13
CSI1YMR025W CDC40P40968 455 aaPredicted RBP1.72□□□□□ -2.13
CSI1YMR025W GCD14P46959 383 aaPredicted RBP1.72□□□□□ -2.13
CSI1YMR025W YGR266WP53326 701 aa1.72□□□□□ -2.13
CSI1YMR025W BIO4P53630 237 aa1.72□□□□□ -2.13
CSI1YMR025W YNL040WP53960 456 aaPredicted RBP1.72□□□□□ -2.13
CSI1YMR025W DTD1Q07648 150 aaKnown RBP1.72□□□□□ -2.13
CSI1YMR025W GPM2Q12008 311 aa1.72□□□□□ -2.13
CSI1YMR025W APC9Q12107 265 aa1.72□□□□□ -2.13
CSI1YMR025W YPL150WQ12152 901 aa1.72□□□□□ -2.13
CSI1YMR025W IES3Q12345 250 aa1.72□□□□□ -2.13
CSI1YMR025W MRX4Q12467 430 aa1.72□□□□□ -2.13
CSI1YMR025W PRM4Q12498 284 aa1.72□□□□□ -2.13
CSI1YMR025W MYO1P08964 1928 aa1.72□□□□□ -2.13
CSI1YMR025W MSB2P32334 1306 aa1.71□□□□□ -2.14
CSI1YMR025W CUP1-1P0CX80 61 aa1.71□□□□□ -2.14
CSI1YMR025W CUP1-2P0CX81 61 aa1.71□□□□□ -2.14
CSI1YMR025W SAR1P20606 190 aaKnown RBP1.71□□□□□ -2.14
CSI1YMR025W GPI12P23797 304 aa1.71□□□□□ -2.14
CSI1YMR025W RPL5P26321 297 aaKnown RBP1.71□□□□□ -2.14
CSI1YMR025W MRPL40P36534 297 aa1.71□□□□□ -2.14
CSI1YMR025W YPC1P38298 316 aa1.71□□□□□ -2.14
CSI1YMR025W YHR035WP38769 630 aa1.71□□□□□ -2.14
CSI1YMR025W LOC1P43586 204 aaPredicted RBP1.71□□□□□ -2.14
CSI1YMR025W YGL185CP53100 379 aa1.71□□□□□ -2.14
CSI1YMR025W YNR066CP53752 436 aa1.71□□□□□ -2.14
CSI1YMR025W ECM18Q04623 453 aa1.71□□□□□ -2.14
CSI1YMR025W YPL245WQ12179 454 aaKnown RBP1.71□□□□□ -2.14
CSI1YMR025W UTP23Q12339 254 aaKnown RBP1.71□□□□□ -2.14
CSI1YMR025W PFK27Q12471 397 aaPredicted RBP1.71□□□□□ -2.14
CSI1YMR025W MRPL23Q12487 163 aaPredicted RBP1.71□□□□□ -2.14
CSI1YMR025W DCP1Q12517 231 aaPredicted RBP1.71□□□□□ -2.14
CSI1YMR025W RPL22AP05749 121 aaKnown RBP1.7□□□□□ -2.14
CSI1YMR025W RPL4AP10664 362 aaKnown RBP1.7□□□□□ -2.14
CSI1YMR025W UGA1P17649 471 aa1.7□□□□□ -2.14
CSI1YMR025W CDC42P19073 191 aa1.7□□□□□ -2.14
CSI1YMR025W BMH1P29311 267 aaKnown RBP1.7□□□□□ -2.14
CSI1YMR025W GPX1P36014 167 aa1.7□□□□□ -2.14
CSI1YMR025W SWD2P36104 329 aaPredicted RBP1.7□□□□□ -2.14
CSI1YMR025W AVT2P39981 480 aa1.7□□□□□ -2.14
CSI1YMR025W EDC2P40023 145 aaPredicted RBP1.7□□□□□ -2.14
CSI1YMR025W RSM25P40496 264 aa1.7□□□□□ -2.14
CSI1YMR025W LOH1P47055 219 aa1.7□□□□□ -2.14
CSI1YMR025W RPL4BP49626 362 aaKnown RBP1.7□□□□□ -2.14
CSI1YMR025W ACT1P60010 375 aaKnown RBP1.7□□□□□ -2.14
CSI1YMR025W SPO19Q03029 223 aa1.7□□□□□ -2.14
CSI1YMR025W UBR2Q07963 1872 aa1.7□□□□□ -2.14
CSI1YMR025W GIS3Q12418 502 aa1.7□□□□□ -2.14
CSI1YMR025W FKS1P38631 1876 aaKnown RBP1.69□□□□□ -2.14
CSI1YMR025W PRP8P33334 2413 aaKnown RBP1.69□□□□□ -2.14
CSI1YMR025W GAL7P08431 366 aa1.69□□□□□ -2.14
CSI1YMR025W RPL31AP0C2H8 113 aaKnown RBP1.69□□□□□ -2.14
CSI1YMR025W YCR025CP25352 136 aa1.69□□□□□ -2.14
CSI1YMR025W CSM1P25651 190 aa1.69□□□□□ -2.14
CSI1YMR025W RPL16BP26785 198 aaKnown RBP1.69□□□□□ -2.14
CSI1YMR025W RPC25P35718 212 aa1.69□□□□□ -2.14
CSI1YMR025W MCH2P36032 473 aa1.69□□□□□ -2.14
CSI1YMR025W ERG10P41338 398 aaKnown RBP1.69□□□□□ -2.14
CSI1YMR025W GDS1P41913 522 aa1.69□□□□□ -2.14
CSI1YMR025W COX16P47081 118 aa1.69□□□□□ -2.14
CSI1YMR025W UBC13P52490 153 aa1.69□□□□□ -2.14
CSI1YMR025W NUP84P52891 726 aa1.69□□□□□ -2.14
CSI1YMR025W YNL095CP53932 642 aa1.69□□□□□ -2.14
CSI1YMR025W ERV25P54837 211 aaKnown RBP1.69□□□□□ -2.14
CSI1YMR025W TIM8P57744 87 aa1.69□□□□□ -2.14
CSI1YMR025W TAZ1Q06510 381 aa1.69□□□□□ -2.14
CSI1YMR025W ABP140Q08641 628 aaKnown RBP1.69□□□□□ -2.14
CSI1YMR025W YOR292CQ08743 309 aa1.69□□□□□ -2.14
CSI1YMR025W SIA1Q12212 622 aa1.69□□□□□ -2.14
CSI1YMR025W LAG2Q92325 660 aa1.69□□□□□ -2.14
CSI1YMR025W UTP20P35194 2493 aaKnown RBP1.69□□□□□ -2.14
CSI1YMR025W JIP3O13555 125 aa1.68□□□□□ -2.14
CSI1YMR025W MSF1P08425 469 aa1.68□□□□□ -2.14
CSI1YMR025W DAL80P26343 269 aa1.68□□□□□ -2.14
CSI1YMR025W SGE1P33335 543 aa1.68□□□□□ -2.14
CSI1YMR025W PRX1P34227 261 aaKnown RBP1.68□□□□□ -2.14
CSI1YMR025W YER188WP40103 239 aa1.68□□□□□ -2.14
CSI1YMR025W MND1P53102 219 aa1.68□□□□□ -2.14
CSI1YMR025W SWC4P53201 476 aa1.68□□□□□ -2.14
CSI1YMR025W MZM1Q03429 123 aaPredicted RBP1.68□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms