RNA–Protein interactions for RNA: YLR423C

ATG17, Transcript of Scaffold protein responsible for phagophore assembly site organization, yeastyeast

Gene ATG17, Length 1,254 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG17YLR423C YIR035CP40579 254 aa4.74□□□□□ -1.65
ATG17YLR423C RSM27P53305 110 aa4.74□□□□□ -1.65
ATG17YLR423C DXO1Q06349 442 aa4.74□□□□□ -1.65
ATG17YLR423C PLB3Q08108 686 aa4.74□□□□□ -1.65
ATG17YLR423C YCT1Q12235 531 aa4.74□□□□□ -1.65
ATG17YLR423C HMT1P38074 348 aa4.73□□□□□ -1.65
ATG17YLR423C BFR1P38934 470 aaKnown RBP RIP-Chip data4.73□□□□□ -1.65not detected
ATG17YLR423C THO1P40040 218 aaKnown RBP4.73□□□□□ -1.65
ATG17YLR423C RHO3Q00245 231 aaKnown RBP4.73□□□□□ -1.65
ATG17YLR423C YPR147CQ06522 304 aaKnown RBP4.73□□□□□ -1.65
ATG17YLR423C RFM1Q12192 310 aa4.73□□□□□ -1.65
ATG17YLR423C YAK1P14680 807 aa4.72□□□□□ -1.65
ATG17YLR423C PRE7P23724 241 aaKnown RBP4.72□□□□□ -1.65
ATG17YLR423C PPA2P28239 310 aa4.72□□□□□ -1.65
ATG17YLR423C HOC1P47124 396 aa4.72□□□□□ -1.65
ATG17YLR423C OSH6Q02201 448 aa4.72□□□□□ -1.65
ATG17YLR423C YPL264CQ08980 353 aa4.72□□□□□ -1.65
ATG17YLR423C SGT2Q12118 346 aaKnown RBP4.72□□□□□ -1.65
ATG17YLR423C YEL009C-AA0A023PZF2 135 aa4.71□□□□□ -1.66
ATG17YLR423C MRPL25P23369 157 aa4.71□□□□□ -1.66
ATG17YLR423C ARN2P38724 620 aa4.71□□□□□ -1.66
ATG17YLR423C NOP13P53883 403 aaKnown RBP RIP-Chip data4.71□□□□□ -1.66not detected
ATG17YLR423C TVP15Q03860 143 aa4.71□□□□□ -1.66
ATG17YLR423C ATG5Q12380 294 aa4.71□□□□□ -1.66
ATG17YLR423C NUP157P40064 1391 aaKnown RBP4.7□□□□□ -1.66
ATG17YLR423C RPL24BP24000 155 aaKnown RBP4.7□□□□□ -1.66
ATG17YLR423C MSS2P40990 351 aa4.7□□□□□ -1.66
ATG17YLR423C OTU1P43558 301 aa4.7□□□□□ -1.66
ATG17YLR423C YJR079WP47126 109 aa4.7□□□□□ -1.66
ATG17YLR423C JHD2P47156 728 aaPredicted RBP4.7□□□□□ -1.66
ATG17YLR423C AAH1P53909 347 aa4.7□□□□□ -1.66
ATG17YLR423C CSG2P35206 410 aa4.69□□□□□ -1.66
ATG17YLR423C ZRG17P53735 605 aa4.69□□□□□ -1.66
ATG17YLR423C RPB4P20433 221 aaPredicted RBP4.68□□□□□ -1.66
ATG17YLR423C MRPL39P36533 70 aa4.68□□□□□ -1.66
ATG17YLR423C YIL059CP40520 121 aa4.68□□□□□ -1.66
ATG17YLR423C SNZ3P43545 298 aa4.68□□□□□ -1.66
ATG17YLR423C ECO1P43605 281 aa4.68□□□□□ -1.66
ATG17YLR423C NIF3P53081 288 aa4.68□□□□□ -1.66
ATG17YLR423C CTF19Q02732 369 aa4.68□□□□□ -1.66
ATG17YLR423C SPO77Q06134 477 aa4.68□□□□□ -1.66
ATG17YLR423C RHO1P06780 209 aaKnown RBP4.67□□□□□ -1.66
ATG17YLR423C YKR104WP0CE69 306 aa4.67□□□□□ -1.66
ATG17YLR423C RPS5P26783 225 aaKnown RBP4.67□□□□□ -1.66
ATG17YLR423C DOA4P32571 926 aa4.67□□□□□ -1.66
ATG17YLR423C AST1P35183 429 aa4.67□□□□□ -1.66
ATG17YLR423C TRM7P38238 310 aaKnown RBP4.67□□□□□ -1.66
ATG17YLR423C CUE1P38428 203 aa4.67□□□□□ -1.66
ATG17YLR423C YPL039WQ03080 316 aa4.67□□□□□ -1.66
ATG17YLR423C PAN1P32521 1480 aa4.67□□□□□ -1.66
ATG17YLR423C YOL163WP0CF20 169 aa4.66□□□□□ -1.66
ATG17YLR423C NHP6BP11633 99 aaKnown RBP4.66□□□□□ -1.66
ATG17YLR423C NOP1P15646 327 aaKnown RBP4.66□□□□□ -1.66
ATG17YLR423C YBR096WP38256 230 aa4.66□□□□□ -1.66
ATG17YLR423C COX15P40086 486 aa4.66□□□□□ -1.66
ATG17YLR423C SNZ2P53824 298 aa4.66□□□□□ -1.66
ATG17YLR423C PGA2P53903 129 aa4.66□□□□□ -1.66
ATG17YLR423C YMR166CQ03829 368 aa4.66□□□□□ -1.66
ATG17YLR423C SPG4Q04438 115 aa4.66□□□□□ -1.66
ATG17YLR423C COQ10Q08058 207 aa4.66□□□□□ -1.66
ATG17YLR423C RRP40Q08285 240 aaKnown RBP4.66□□□□□ -1.66
ATG17YLR423C YPR063CQ12160 140 aa4.66□□□□□ -1.66
ATG17YLR423C YPS3Q12303 508 aa4.66□□□□□ -1.66
ATG17YLR423C YBL008W-AQ3E821 79 aa4.66□□□□□ -1.66
ATG17YLR423C BMH1P29311 267 aaKnown RBP4.65□□□□□ -1.67
ATG17YLR423C VMA6P32366 345 aaKnown RBP4.65□□□□□ -1.67
ATG17YLR423C YKT6P36015 200 aaKnown RBP4.65□□□□□ -1.67
ATG17YLR423C SSH1P38353 490 aaKnown RBP4.65□□□□□ -1.67
ATG17YLR423C GOS1P38736 223 aa4.65□□□□□ -1.67
ATG17YLR423C YHR127WP38833 243 aaKnown RBP4.65□□□□□ -1.67
ATG17YLR423C SPL2P38839 148 aa4.65□□□□□ -1.67
ATG17YLR423C ALG9P53868 555 aaKnown RBP4.65□□□□□ -1.67
ATG17YLR423C GRX3Q03835 250 aa4.65□□□□□ -1.67
ATG17YLR423C GTO3Q04806 366 aa4.65□□□□□ -1.67
ATG17YLR423C YOL019WQ08157 551 aa4.65□□□□□ -1.67
ATG17YLR423C SLD7Q08457 257 aa4.65□□□□□ -1.67
ATG17YLR423C PRR2Q12310 699 aa4.65□□□□□ -1.67
ATG17YLR423C ISD11Q6Q560 94 aa4.65□□□□□ -1.67
ATG17YLR423C THP2O13539 261 aaKnown RBP4.64□□□□□ -1.67
ATG17YLR423C ARG80P07249 177 aa4.64□□□□□ -1.67
ATG17YLR423C VPS21P36017 210 aaKnown RBP4.64□□□□□ -1.67
ATG17YLR423C YFR045WP43617 309 aa4.64□□□□□ -1.67
ATG17YLR423C GOT1Q03554 138 aa4.64□□□□□ -1.67
ATG17YLR423C YDR222WQ04925 415 aa4.64□□□□□ -1.67
ATG17YLR423C IES4Q08561 116 aa4.64□□□□□ -1.67
ATG17YLR423C GIS3Q12418 502 aa4.64□□□□□ -1.67
ATG17YLR423C RPO26P20435 155 aa4.63□□□□□ -1.67
ATG17YLR423C MIC12P38341 106 aa4.63□□□□□ -1.67
ATG17YLR423C SUR2P38992 349 aa4.63□□□□□ -1.67
ATG17YLR423C YDR124WQ04608 324 aa4.63□□□□□ -1.67
ATG17YLR423C DCR2Q05924 578 aa4.63□□□□□ -1.67
ATG17YLR423C PBN1P25580 416 aa4.62□□□□□ -1.67
ATG17YLR423C YCR102CP25608 368 aa4.62□□□□□ -1.67
ATG17YLR423C EHD3P28817 500 aa4.62□□□□□ -1.67
ATG17YLR423C TKL2P33315 681 aa4.62□□□□□ -1.67
ATG17YLR423C COS4P43542 379 aa4.62□□□□□ -1.67
ATG17YLR423C YJL028WP47062 111 aa4.62□□□□□ -1.67
ATG17YLR423C RPC17P47076 161 aa4.62□□□□□ -1.67
ATG17YLR423C MIG2P53035 382 aa4.62□□□□□ -1.67
ATG17YLR423C CGR1P53188 120 aa4.62□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 66.3 ms