RNA–Protein interactions for RNA: YLR221C

RSA3, Transcript of Protein with a likely role in ribosomal maturation, yeast

Gene RSA3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA3	YLR221C	GLG2	P47011	380 aa		4.03	□□□□□ -1.76
RSA3	YLR221C	YPR063C	Q12160	140 aa		4.03	□□□□□ -1.76
RSA3	YLR221C	YDL012C	Q12489	107 aa		4.03	□□□□□ -1.76
RSA3	YLR221C	CSG2	P35206	410 aa		4.02	□□□□□ -1.77
RSA3	YLR221C	YBL081W	P38180	368 aa	Known RBP	4.02	□□□□□ -1.77
RSA3	YLR221C	TRM7	P38238	310 aa	Known RBP	4.02	□□□□□ -1.77
RSA3	YLR221C	YIL059C	P40520	121 aa		4.02	□□□□□ -1.77
RSA3	YLR221C	AAH1	P53909	347 aa		4.02	□□□□□ -1.77
RSA3	YLR221C	RFM1	Q12192	310 aa		4.02	□□□□□ -1.77
RSA3	YLR221C	CFT1	Q06632	1357 aa	Known RBP	4.02	□□□□□ -1.77
RSA3	YLR221C	ARN2	P38724	620 aa		4.01	□□□□□ -1.77
RSA3	YLR221C	TCD1	P38756	429 aa		4.01	□□□□□ -1.77
RSA3	YLR221C	MYO5	Q04439	1219 aa	Known RBP	4.01	□□□□□ -1.77
RSA3	YLR221C	YDR222W	Q04925	415 aa		4.01	□□□□□ -1.77
RSA3	YLR221C	YPR098C	Q06089	161 aa		4.01	□□□□□ -1.77
RSA3	YLR221C	YCT1	Q12235	531 aa		4.01	□□□□□ -1.77
RSA3	YLR221C	PRR2	Q12310	699 aa		4.01	□□□□□ -1.77
RSA3	YLR221C	SNU23	Q12368	194 aa	Predicted RBP	4.01	□□□□□ -1.77
RSA3	YLR221C	YEL009C-A	A0A023PZF2	135 aa		4	□□□□□ -1.77
RSA3	YLR221C	TDH2	P00358	332 aa	Known RBP	4	□□□□□ -1.77
RSA3	YLR221C	BMH1	P29311	267 aa	Known RBP	4	□□□□□ -1.77
RSA3	YLR221C	BMH2	P34730	273 aa	Known RBP	4	□□□□□ -1.77
RSA3	YLR221C	LDB7	P38210	180 aa		4	□□□□□ -1.77
RSA3	YLR221C	GCN20	P43535	752 aa	Known RBP	4	□□□□□ -1.77
RSA3	YLR221C	ECO1	P43605	281 aa		4	□□□□□ -1.77
RSA3	YLR221C	BUD13	P46947	266 aa	Predicted RBP	4	□□□□□ -1.77
RSA3	YLR221C	FMT1	P32785	401 aa		3.99	□□□□□ -1.77
RSA3	YLR221C	SPL2	P38839	148 aa		3.99	□□□□□ -1.77
RSA3	YLR221C	SUR2	P38992	349 aa		3.99	□□□□□ -1.77
RSA3	YLR221C	HOC1	P47124	396 aa		3.99	□□□□□ -1.77
RSA3	YLR221C	YPL039W	Q03080	316 aa		3.99	□□□□□ -1.77
RSA3	YLR221C	PLB3	Q08108	686 aa		3.99	□□□□□ -1.77
RSA3	YLR221C	RRS1	Q08746	203 aa	Known RBP	3.99	□□□□□ -1.77
RSA3	YLR221C	ISD11	Q6Q560	94 aa		3.99	□□□□□ -1.77
RSA3	YLR221C	NUP157	P40064	1391 aa	Known RBP	3.99	□□□□□ -1.77
RSA3	YLR221C	COS2	P0CX12	379 aa		3.98	□□□□□ -1.77
RSA3	YLR221C	COS3	P0CX13	379 aa		3.98	□□□□□ -1.77
RSA3	YLR221C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	3.98	□□□□□ -1.77	RIP-Chip
RSA3	YLR221C	RTR1	P40084	226 aa	Predicted RBP	3.98	□□□□□ -1.77
RSA3	YLR221C	ALG9	P53868	555 aa	Known RBP	3.98	□□□□□ -1.77
RSA3	YLR221C	YPR147C	Q06522	304 aa	Known RBP	3.98	□□□□□ -1.77
RSA3	YLR221C	TCP1	P12612	559 aa	Known RBP	3.97	□□□□□ -1.77
RSA3	YLR221C	TKL2	P33315	681 aa		3.97	□□□□□ -1.77
RSA3	YLR221C	SGE1	P33335	543 aa		3.97	□□□□□ -1.77
RSA3	YLR221C	ECM14	P38836	430 aa		3.97	□□□□□ -1.77
RSA3	YLR221C	THO1	P40040	218 aa	Known RBP	3.97	□□□□□ -1.77
RSA3	YLR221C	YJR079W	P47126	109 aa		3.97	□□□□□ -1.77
RSA3	YLR221C	JHD2	P47156	728 aa	Predicted RBP	3.97	□□□□□ -1.77
RSA3	YLR221C	NIF3	P53081	288 aa		3.97	□□□□□ -1.77
RSA3	YLR221C	GTO3	Q04806	366 aa		3.97	□□□□□ -1.77
RSA3	YLR221C	COQ10	Q08058	207 aa		3.97	□□□□□ -1.77
RSA3	YLR221C	YPS3	Q12303	508 aa		3.97	□□□□□ -1.77
RSA3	YLR221C	YKR104W	P0CE69	306 aa		3.96	□□□□□ -1.78
RSA3	YLR221C	ZWF1	P11412	505 aa	Known RBP	3.96	□□□□□ -1.78
RSA3	YLR221C	MRPL25	P23369	157 aa		3.96	□□□□□ -1.78
RSA3	YLR221C	RPS5	P26783	225 aa	Known RBP	3.96	□□□□□ -1.78
RSA3	YLR221C	PRY2	P36110	329 aa		3.96	□□□□□ -1.78
RSA3	YLR221C	PFS2	P42841	465 aa	Known RBP	3.96	□□□□□ -1.78
RSA3	YLR221C	RHO3	Q00245	231 aa	Known RBP	3.96	□□□□□ -1.78
RSA3	YLR221C	SMT3	Q12306	101 aa	Known RBP	3.96	□□□□□ -1.78
RSA3	YLR221C	MRX4	Q12467	430 aa		3.96	□□□□□ -1.78
RSA3	YLR221C	PAN1	P32521	1480 aa		3.96	□□□□□ -1.78
RSA3	YLR221C	MATALPHA1	P0CY06	175 aa		3.95	□□□□□ -1.78
RSA3	YLR221C	HMLALPHA1	P0CY07	175 aa		3.95	□□□□□ -1.78
RSA3	YLR221C	RPO26	P20435	155 aa		3.95	□□□□□ -1.78
RSA3	YLR221C	EHD3	P28817	500 aa		3.95	□□□□□ -1.78
RSA3	YLR221C	NTG1	P31378	399 aa		3.95	□□□□□ -1.78
RSA3	YLR221C	YBR096W	P38256	230 aa		3.95	□□□□□ -1.78
RSA3	YLR221C	GOS1	P38736	223 aa		3.95	□□□□□ -1.78
RSA3	YLR221C	TEM1	P38987	245 aa		3.95	□□□□□ -1.78
RSA3	YLR221C	OTU1	P43558	301 aa		3.95	□□□□□ -1.78
RSA3	YLR221C	OST3	P48439	350 aa		3.95	□□□□□ -1.78
RSA3	YLR221C	MIG2	P53035	382 aa		3.95	□□□□□ -1.78
RSA3	YLR221C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	3.95	□□□□□ -1.78	not detected
RSA3	YLR221C	CTF19	Q02732	369 aa		3.95	□□□□□ -1.78
RSA3	YLR221C	YPR195C	Q06594	109 aa		3.95	□□□□□ -1.78
RSA3	YLR221C	RRP40	Q08285	240 aa	Known RBP	3.95	□□□□□ -1.78
RSA3	YLR221C	RPL24B	P24000	155 aa	Known RBP	3.94	□□□□□ -1.78
RSA3	YLR221C	SFC1	P33303	322 aa		3.94	□□□□□ -1.78
RSA3	YLR221C	MRPL39	P36533	70 aa		3.94	□□□□□ -1.78
RSA3	YLR221C	SNZ3	P43545	298 aa		3.94	□□□□□ -1.78
RSA3	YLR221C	MRH4	P53166	561 aa		3.94	□□□□□ -1.78
RSA3	YLR221C	CWC21	Q03375	135 aa	Known RBP	3.94	□□□□□ -1.78
RSA3	YLR221C	YMR166C	Q03829	368 aa		3.94	□□□□□ -1.78
RSA3	YLR221C	SPG4	Q04438	115 aa		3.94	□□□□□ -1.78
RSA3	YLR221C	YDR114C	Q04597	100 aa		3.94	□□□□□ -1.78
RSA3	YLR221C	YDR124W	Q04608	324 aa		3.94	□□□□□ -1.78
RSA3	YLR221C	SPO77	Q06134	477 aa		3.94	□□□□□ -1.78
RSA3	YLR221C	YOL019W	Q08157	551 aa		3.94	□□□□□ -1.78
RSA3	YLR221C	YBL112C	Q3E7Y4	105 aa		3.94	□□□□□ -1.78
RSA3	YLR221C	RPS23A	P0CX29	145 aa	Known RBP	3.93	□□□□□ -1.78
RSA3	YLR221C	RPS23B	P0CX30	145 aa		3.93	□□□□□ -1.78
RSA3	YLR221C	AGA2	P32781	87 aa		3.93	□□□□□ -1.78
RSA3	YLR221C	CUE1	P38428	203 aa		3.93	□□□□□ -1.78
RSA3	YLR221C	YHB1	P39676	399 aa	Known RBP	3.93	□□□□□ -1.78
RSA3	YLR221C	MSS2	P40990	351 aa		3.93	□□□□□ -1.78
RSA3	YLR221C	YJL028W	P47062	111 aa		3.93	□□□□□ -1.78
RSA3	YLR221C	CPR7	P47103	393 aa		3.93	□□□□□ -1.78
RSA3	YLR221C	GOT1	Q03554	138 aa		3.93	□□□□□ -1.78
RSA3	YLR221C	SYC1	Q08553	188 aa	Predicted RBP	3.93	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 73.1 ms