RNA–Protein interactions for RNA: YLL016W

SDC25, Transcript of Non-essential Ras guanine nucleotide exchange factor (GEF), yeastyeast

Gene SDC25, Length 3,147 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDC25YLL016W YCT1Q12235 531 aa2.14□□□□□ -2.07
SDC25YLL016W CRC1Q12289 327 aa2.14□□□□□ -2.07
SDC25YLL016W RPN6Q12377 434 aa2.14□□□□□ -2.07
SDC25YLL016W RPL35AP0CX84 120 aaKnown RBP2.13□□□□□ -2.07
SDC25YLL016W RPL35BP0CX85 120 aaKnown RBP2.13□□□□□ -2.07
SDC25YLL016W RSA4P25382 515 aaKnown RBP2.13□□□□□ -2.07
SDC25YLL016W YCR102CP25608 368 aa2.13□□□□□ -2.07
SDC25YLL016W YCR022CP25620 114 aa2.13□□□□□ -2.07
SDC25YLL016W DEP1P31385 405 aa2.13□□□□□ -2.07
SDC25YLL016W OAR1P35731 278 aa2.13□□□□□ -2.07
SDC25YLL016W MCH2P36032 473 aa2.13□□□□□ -2.07
SDC25YLL016W JEN1P36035 616 aa2.13□□□□□ -2.07
SDC25YLL016W AVT5P38176 459 aa2.13□□□□□ -2.07
SDC25YLL016W PEX22P39718 180 aa2.13□□□□□ -2.07
SDC25YLL016W PTI1P39927 425 aaPredicted RBP2.13□□□□□ -2.07
SDC25YLL016W YFL067WP43537 175 aa2.13□□□□□ -2.07
SDC25YLL016W YPS5P53057 165 aa2.13□□□□□ -2.07
SDC25YLL016W ALG13P53178 202 aa2.13□□□□□ -2.07
SDC25YLL016W VHT1P53241 593 aa2.13□□□□□ -2.07
SDC25YLL016W RIM13Q03792 727 aa2.13□□□□□ -2.07
SDC25YLL016W TLG2Q08144 397 aa2.13□□□□□ -2.07
SDC25YLL016W YPL278CQ08990 100 aa2.13□□□□□ -2.07
SDC25YLL016W QCR2P07257 368 aa2.13□□□□□ -2.07
SDC25YLL016W TUB1P09733 447 aaKnown RBP2.13□□□□□ -2.07
SDC25YLL016W RPL23AP0CX41 137 aaKnown RBP2.13□□□□□ -2.07
SDC25YLL016W RPL23BP0CX42 137 aaKnown RBP2.13□□□□□ -2.07
SDC25YLL016W MRPL20P22354 195 aaPredicted RBP2.13□□□□□ -2.07
SDC25YLL016W MAK31P23059 88 aa2.13□□□□□ -2.07
SDC25YLL016W PPH21P23594 369 aa2.13□□□□□ -2.07
SDC25YLL016W SPO23P33757 523 aa2.13□□□□□ -2.07
SDC25YLL016W ATG12P38316 186 aa2.13□□□□□ -2.07
SDC25YLL016W SOP4P39543 234 aaPredicted RBP2.13□□□□□ -2.07
SDC25YLL016W GUF1P46943 645 aa2.13□□□□□ -2.07
SDC25YLL016W GMC1Q04399 608 aa2.13□□□□□ -2.07
SDC25YLL016W MSL5Q12186 476 aaKnown RBP RIP-Chip data2.13□□□□□ -2.07not detected
SDC25YLL016W DCN1Q12395 269 aa2.13□□□□□ -2.07
SDC25YLL016W YCL012CQ8J0M4 134 aa2.13□□□□□ -2.07
SDC25YLL016W RPS3P05750 240 aaKnown RBP2.13□□□□□ -2.07
SDC25YLL016W HOM6P31116 359 aaKnown RBP2.13□□□□□ -2.07
SDC25YLL016W PHA2P32452 334 aa2.13□□□□□ -2.07
SDC25YLL016W YPT52P36018 234 aaKnown RBP2.13□□□□□ -2.07
SDC25YLL016W UTH1P36135 365 aa2.13□□□□□ -2.07
SDC25YLL016W MED6P38782 295 aa2.13□□□□□ -2.07
SDC25YLL016W SEO1P39709 593 aa2.13□□□□□ -2.07
SDC25YLL016W HAC1P41546 238 aa2.13□□□□□ -2.07
SDC25YLL016W NRM1P53718 249 aa2.13□□□□□ -2.07
SDC25YLL016W COS1P53822 381 aa2.13□□□□□ -2.07
SDC25YLL016W GAS2Q06135 555 aa2.13□□□□□ -2.07
SDC25YLL016W MRX9Q07349 420 aaKnown RBP2.13□□□□□ -2.07
SDC25YLL016W BRX1Q08235 291 aaKnown RBP2.13□□□□□ -2.07
SDC25YLL016W FCY22Q12119 530 aa2.13□□□□□ -2.07
SDC25YLL016W FRE8Q12209 686 aa2.13□□□□□ -2.07
SDC25YLL016W SME1Q12330 94 aaPredicted RBP2.13□□□□□ -2.07
SDC25YLL016W HEM4P06174 275 aa2.12□□□□□ -2.07
SDC25YLL016W ZWF1P11412 505 aaKnown RBP2.12□□□□□ -2.07
SDC25YLL016W CPR1P14832 162 aaKnown RBP2.12□□□□□ -2.07
SDC25YLL016W FPR1P20081 114 aaKnown RBP2.12□□□□□ -2.07
SDC25YLL016W MAK5P38112 773 aaPredicted RBP2.12□□□□□ -2.07
SDC25YLL016W AME1P38313 324 aa2.12□□□□□ -2.07
SDC25YLL016W BMT5P40493 336 aa2.12□□□□□ -2.07
SDC25YLL016W CFD1P40558 293 aa2.12□□□□□ -2.07
SDC25YLL016W YJL016WP47072 561 aa2.12□□□□□ -2.07
SDC25YLL016W NSA1P53136 463 aaPredicted RBP2.12□□□□□ -2.07
SDC25YLL016W YIP3P53633 176 aa2.12□□□□□ -2.07
SDC25YLL016W YNL040WP53960 456 aaPredicted RBP2.12□□□□□ -2.07
SDC25YLL016W TDA1Q03533 586 aa2.12□□□□□ -2.07
SDC25YLL016W PEX30Q06169 523 aa2.12□□□□□ -2.07
SDC25YLL016W YPR091CQ06833 770 aa2.12□□□□□ -2.07
SDC25YLL016W YLR126CQ12288 251 aa2.12□□□□□ -2.07
SDC25YLL016W PRP8P33334 2413 aaKnown RBP2.12□□□□□ -2.07
SDC25YLL016W TPS2P31688 896 aaKnown RBP2.12□□□□□ -2.07
SDC25YLL016W VPH2P32341 215 aa2.12□□□□□ -2.07
SDC25YLL016W ACP1P32463 125 aa2.12□□□□□ -2.07
SDC25YLL016W YKL187CP34231 750 aa2.12□□□□□ -2.07
SDC25YLL016W CAF4P36130 643 aa2.12□□□□□ -2.07
SDC25YLL016W MTC4P38335 694 aaKnown RBP2.12□□□□□ -2.07
SDC25YLL016W WSC4P38739 605 aa2.12□□□□□ -2.07
SDC25YLL016W BAT1P38891 393 aaKnown RBP2.12□□□□□ -2.07
SDC25YLL016W POG1P40473 351 aa2.12□□□□□ -2.07
SDC25YLL016W CIN2P46670 268 aa2.12□□□□□ -2.07
SDC25YLL016W TRM9P49957 279 aa2.12□□□□□ -2.07
SDC25YLL016W MIC26P50087 233 aa2.12□□□□□ -2.07
SDC25YLL016W YET2Q04210 160 aa2.12□□□□□ -2.07
SDC25YLL016W YMR254CQ04838 102 aa2.12□□□□□ -2.07
SDC25YLL016W DTD1Q07648 150 aaKnown RBP2.12□□□□□ -2.07
SDC25YLL016W ATX2Q12067 313 aa2.12□□□□□ -2.07
SDC25YLL016W YOR114WQ12219 294 aa2.12□□□□□ -2.07
SDC25YLL016W SAL1D6W196 494 aa2.11□□□□□ -2.07
SDC25YLL016W PUT1P09368 476 aa2.11□□□□□ -2.07
SDC25YLL016W PDC2P32896 925 aa2.11□□□□□ -2.07
SDC25YLL016W UBC6P33296 250 aaPredicted RBP2.11□□□□□ -2.07
SDC25YLL016W PMU1P36069 295 aa2.11□□□□□ -2.07
SDC25YLL016W HEM14P40012 539 aa2.11□□□□□ -2.07
SDC25YLL016W FIS1P40515 155 aa2.11□□□□□ -2.07
SDC25YLL016W MOB2P43563 287 aa2.11□□□□□ -2.07
SDC25YLL016W YJR149WP47177 404 aa2.11□□□□□ -2.07
SDC25YLL016W NUP57P48837 541 aa2.11□□□□□ -2.07
SDC25YLL016W MGA1P53050 456 aa2.11□□□□□ -2.07
SDC25YLL016W TAF9Q05027 157 aa2.11□□□□□ -2.07
SDC25YLL016W SEC10Q06245 871 aa2.11□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 74.8 ms