RNA–Protein interactions for RNA: YKR014C

YPT52, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene YPT52, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT52YKR014C RPL10P41805 221 aaKnown RBP2.04□□□□□ -2.08
YPT52YKR014C MAL13P53338 473 aa2.04□□□□□ -2.08
YPT52YKR014C ALG9P53868 555 aaKnown RBP2.04□□□□□ -2.08
YPT52YKR014C YNL095CP53932 642 aa2.04□□□□□ -2.08
YPT52YKR014C OSH6Q02201 448 aa2.04□□□□□ -2.08
YPT52YKR014C EBS1Q03466 884 aaKnown RBP2.04□□□□□ -2.08
YPT52YKR014C BOP2Q06150 570 aa2.04□□□□□ -2.08
YPT52YKR014C CFT1Q06632 1357 aaKnown RBP2.04□□□□□ -2.08
YPT52YKR014C RNA15P25299 296 aaPredicted RBP2.03□□□□□ -2.08
YPT52YKR014C MSN4P33749 630 aa2.03□□□□□ -2.08
YPT52YKR014C YBL081WP38180 368 aaKnown RBP2.03□□□□□ -2.08
YPT52YKR014C RPE1P46969 238 aa2.03□□□□□ -2.08
YPT52YKR014C MRPL50P53724 139 aa2.03□□□□□ -2.08
YPT52YKR014C SWT21P53873 357 aaPredicted RBP2.03□□□□□ -2.08
YPT52YKR014C FMP41P53889 259 aaKnown RBP2.03□□□□□ -2.08
YPT52YKR014C SWS2P53937 143 aa2.03□□□□□ -2.08
YPT52YKR014C SDC1Q03323 175 aa2.03□□□□□ -2.08
YPT52YKR014C PEX10Q05568 337 aa2.03□□□□□ -2.08
YPT52YKR014C PAM18Q07914 168 aa2.03□□□□□ -2.08
YPT52YKR014C MSH5Q12175 901 aa2.03□□□□□ -2.08
YPT52YKR014C PRR2Q12310 699 aa2.03□□□□□ -2.08
YPT52YKR014C ATG31Q12421 196 aa2.03□□□□□ -2.08
YPT52YKR014C AI5_BETAQ9ZZX0 354 aa2.03□□□□□ -2.08
YPT52YKR014C RPL4AP10664 362 aaKnown RBP2.02□□□□□ -2.09
YPT52YKR014C YCR016WP25617 290 aaKnown RBP2.02□□□□□ -2.09
YPT52YKR014C QRI5P32344 111 aa2.02□□□□□ -2.09
YPT52YKR014C ERG2P32352 222 aa2.02□□□□□ -2.09
YPT52YKR014C MRX3P38172 270 aa2.02□□□□□ -2.09
YPT52YKR014C TRM7P38238 310 aaKnown RBP2.02□□□□□ -2.09
YPT52YKR014C YER188WP40103 239 aa2.02□□□□□ -2.09
YPT52YKR014C DSN1P40568 576 aa2.02□□□□□ -2.09
YPT52YKR014C RPL4BP49626 362 aaKnown RBP2.02□□□□□ -2.09
YPT52YKR014C NBP35P52920 328 aa2.02□□□□□ -2.09
YPT52YKR014C SLX9P53251 210 aaPredicted RBP2.02□□□□□ -2.09
YPT52YKR014C ASI3P53983 676 aa2.02□□□□□ -2.09
YPT52YKR014C TIM11P81449 96 aaPredicted RBP2.02□□□□□ -2.09
YPT52YKR014C RNH1Q04740 348 aa2.02□□□□□ -2.09
YPT52YKR014C LOA1Q06508 300 aa2.02□□□□□ -2.09
YPT52YKR014C YPL119C-AQ3E751 87 aa2.02□□□□□ -2.09
YPT52YKR014C VPS3P23643 1011 aa2.01□□□□□ -2.09
YPT52YKR014C SRB4P32569 687 aa2.01□□□□□ -2.09
YPT52YKR014C YHI9P38765 294 aa2.01□□□□□ -2.09
YPT52YKR014C MNN5P46982 586 aa2.01□□□□□ -2.09
YPT52YKR014C USE1P53146 245 aa2.01□□□□□ -2.09
YPT52YKR014C TVP15Q03860 143 aa2.01□□□□□ -2.09
YPT52YKR014C YPL150WQ12152 901 aa2.01□□□□□ -2.09
YPT52YKR014C RUD3Q12234 484 aaKnown RBP2.01□□□□□ -2.09
YPT52YKR014C PAN1P32521 1480 aa2.01□□□□□ -2.09
YPT52YKR014C NUP157P40064 1391 aaKnown RBP2□□□□□ -2.09
YPT52YKR014C HMT1P38074 348 aa2□□□□□ -2.09
YPT52YKR014C SMB1P40018 196 aaKnown RBP2□□□□□ -2.09
YPT52YKR014C MYO5Q04439 1219 aaKnown RBP2□□□□□ -2.09
YPT52YKR014C ATG17Q06410 417 aa2□□□□□ -2.09
YPT52YKR014C CSM4Q08955 156 aa2□□□□□ -2.09
YPT52YKR014C HIS3P06633 220 aa1.99□□□□□ -2.09
YPT52YKR014C ZWF1P11412 505 aaKnown RBP1.99□□□□□ -2.09
YPT52YKR014C POX1P13711 748 aa1.99□□□□□ -2.09
YPT52YKR014C HOM6P31116 359 aaKnown RBP1.99□□□□□ -2.09
YPT52YKR014C BMH2P34730 273 aaKnown RBP1.99□□□□□ -2.09
YPT52YKR014C JEN1P36035 616 aa1.99□□□□□ -2.09
YPT52YKR014C LDB7P38210 180 aa1.99□□□□□ -2.09
YPT52YKR014C YHL049CP38722 271 aa1.99□□□□□ -2.09
YPT52YKR014C ARN2P38724 620 aa1.99□□□□□ -2.09
YPT52YKR014C TCD1P38756 429 aa1.99□□□□□ -2.09
YPT52YKR014C MED6P38782 295 aa1.99□□□□□ -2.09
YPT52YKR014C YER085CP40058 173 aa1.99□□□□□ -2.09
YPT52YKR014C GLG2P47011 380 aa1.99□□□□□ -2.09
YPT52YKR014C YJR141WP47172 347 aaPredicted RBP1.99□□□□□ -2.09
YPT52YKR014C KRE28Q04431 385 aa1.99□□□□□ -2.09
YPT52YKR014C YPR098CQ06089 161 aa1.99□□□□□ -2.09
YPT52YKR014C PLB3Q08108 686 aa1.99□□□□□ -2.09
YPT52YKR014C SNU23Q12368 194 aaPredicted RBP1.99□□□□□ -2.09
YPT52YKR014C ATG5Q12380 294 aa1.99□□□□□ -2.09
YPT52YKR014C SNF8Q12483 233 aa1.99□□□□□ -2.09
YPT52YKR014C TCP1P12612 559 aaKnown RBP1.98□□□□□ -2.09
YPT52YKR014C BMH1P29311 267 aaKnown RBP1.98□□□□□ -2.09
YPT52YKR014C FZO1P38297 855 aa1.98□□□□□ -2.09
YPT52YKR014C SPL2P38839 148 aa1.98□□□□□ -2.09
YPT52YKR014C RTR1P40084 226 aaPredicted RBP1.98□□□□□ -2.09
YPT52YKR014C JHD2P47156 728 aaPredicted RBP1.98□□□□□ -2.09
YPT52YKR014C RHO3Q00245 231 aaKnown RBP1.98□□□□□ -2.09
YPT52YKR014C YPL039WQ03080 316 aa1.98□□□□□ -2.09
YPT52YKR014C YMR166CQ03829 368 aa1.98□□□□□ -2.09
YPT52YKR014C YLR283WQ05867 314 aa1.98□□□□□ -2.09
YPT52YKR014C YPR147CQ06522 304 aaKnown RBP1.98□□□□□ -2.09
YPT52YKR014C YEL009C-AA0A023PZF2 135 aa1.97□□□□□ -2.09
YPT52YKR014C MATALPHA1P0CY06 175 aa1.97□□□□□ -2.09
YPT52YKR014C HMLALPHA1P0CY07 175 aa1.97□□□□□ -2.09
YPT52YKR014C SGE1P33335 543 aa1.97□□□□□ -2.09
YPT52YKR014C CSG2P35206 410 aa1.97□□□□□ -2.09
YPT52YKR014C BFR1P38934 470 aaKnown RBP RIP-Chip data1.97□□□□□ -2.09not detected
YPT52YKR014C HOC1P47124 396 aa1.97□□□□□ -2.09
YPT52YKR014C DSK2P48510 373 aa1.97□□□□□ -2.09
YPT52YKR014C AAH1P53909 347 aa1.97□□□□□ -2.09
YPT52YKR014C RRP40Q08285 240 aaKnown RBP1.97□□□□□ -2.09
YPT52YKR014C RRS1Q08746 203 aaKnown RBP1.97□□□□□ -2.09
YPT52YKR014C YCT1Q12235 531 aa1.97□□□□□ -2.09
YPT52YKR014C ISD11Q6Q560 94 aa1.97□□□□□ -2.09
YPT52YKR014C YKR104WP0CE69 306 aa1.96□□□□□ -2.1
YPT52YKR014C COS2P0CX12 379 aa1.96□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 100 ms