RNA–Protein interactions for RNA: YIL030C

SSM4, Transcript of Ubiquitin-protein ligase involved in ER-associated protein degradation, yeastyeast

Gene SSM4, Length 3,960 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSM4YIL030C PHB2P50085 310 aa3.18□□□□□ -1.9
SSM4YIL030C BNA7Q04066 261 aa3.18□□□□□ -1.9
SSM4YIL030C CDC7P06243 507 aa3.18□□□□□ -1.9
SSM4YIL030C BUD5P25300 642 aaPredicted RBP3.18□□□□□ -1.9
SSM4YIL030C PET18P25362 215 aa3.18□□□□□ -1.9
SSM4YIL030C SEF1P34228 1148 aa3.18□□□□□ -1.9
SSM4YIL030C SMK1P41808 388 aa3.18□□□□□ -1.9
SSM4YIL030C UBP8P50102 471 aa3.18□□□□□ -1.9
SSM4YIL030C PCC1Q3E833 88 aa3.18□□□□□ -1.9
SSM4YIL030C UBI4P0CG63 381 aaKnown RBP3.18□□□□□ -1.9
SSM4YIL030C RPL40AP0CH08 128 aaKnown RBP3.18□□□□□ -1.9
SSM4YIL030C RPL40BP0CH09 128 aaKnown RBP3.18□□□□□ -1.9
SSM4YIL030C HOM3P10869 527 aa3.18□□□□□ -1.9
SSM4YIL030C ZRC1P20107 442 aa3.18□□□□□ -1.9
SSM4YIL030C RNQ1P25367 405 aa3.18□□□□□ -1.9
SSM4YIL030C NTF2P33331 125 aaKnown RBP3.18□□□□□ -1.9
SSM4YIL030C GIC1P38785 314 aa3.18□□□□□ -1.9
SSM4YIL030C YEA6P39953 335 aa3.18□□□□□ -1.9
SSM4YIL030C RMD6P39975 231 aa3.18□□□□□ -1.9
SSM4YIL030C YEA4P40004 342 aa3.18□□□□□ -1.9
SSM4YIL030C GET2P40056 285 aa3.18□□□□□ -1.9
SSM4YIL030C LSM4P40070 187 aaKnown RBP3.18□□□□□ -1.9
SSM4YIL030C RPL13BP40212 199 aaKnown RBP3.18□□□□□ -1.9
SSM4YIL030C YIL152WP40455 235 aa3.18□□□□□ -1.9
SSM4YIL030C APQ12P40532 138 aa3.18□□□□□ -1.9
SSM4YIL030C TOS2P50078 622 aa3.18□□□□□ -1.9
SSM4YIL030C ERG26P53199 349 aaKnown RBP3.18□□□□□ -1.9
SSM4YIL030C ERG13P54839 491 aaKnown RBP3.18□□□□□ -1.9
SSM4YIL030C NOC4Q06512 552 aaPredicted RBP3.18□□□□□ -1.9
SSM4YIL030C YCT1Q12235 531 aa3.18□□□□□ -1.9
SSM4YIL030C VAM3Q12241 283 aa3.18□□□□□ -1.9
SSM4YIL030C RPL13AQ12690 199 aaPredicted RBP3.18□□□□□ -1.9
SSM4YIL030C YDL085C-AQ3E7B7 68 aaKnown RBP3.18□□□□□ -1.9
SSM4YIL030C RAS1P01119 309 aa3.17□□□□□ -1.9
SSM4YIL030C YML003WP0CF16 290 aa3.17□□□□□ -1.9
SSM4YIL030C ERG9P29704 444 aa3.17□□□□□ -1.9
SSM4YIL030C CSE2P33308 149 aa3.17□□□□□ -1.9
SSM4YIL030C PEX28P38848 579 aa3.17□□□□□ -1.9
SSM4YIL030C RMD9P53140 646 aaKnown RBP3.17□□□□□ -1.9
SSM4YIL030C YGR151CP53287 111 aa3.17□□□□□ -1.9
SSM4YIL030C ALG9P53868 555 aaKnown RBP3.17□□□□□ -1.9
SSM4YIL030C ACT1P60010 375 aaKnown RBP3.17□□□□□ -1.9
SSM4YIL030C YDR387CQ04162 555 aa3.17□□□□□ -1.9
SSM4YIL030C FIT1Q04433 528 aa3.17□□□□□ -1.9
SSM4YIL030C BER1Q06688 274 aaKnown RBP3.17□□□□□ -1.9
SSM4YIL030C MED4Q12343 284 aa3.17□□□□□ -1.9
SSM4YIL030C DCN1Q12395 269 aa3.17□□□□□ -1.9
SSM4YIL030C YDR524C-BQ3E6R4 66 aa3.17□□□□□ -1.9
SSM4YIL030C SEC59P20048 519 aa3.17□□□□□ -1.9
SSM4YIL030C TIM12P32830 109 aa3.17□□□□□ -1.9
SSM4YIL030C ORC2P32833 620 aa3.17□□□□□ -1.9
SSM4YIL030C SUI1P32911 108 aaKnown RBP3.17□□□□□ -1.9
SSM4YIL030C SNC2P33328 115 aa3.17□□□□□ -1.9
SSM4YIL030C PAM16P42949 149 aa3.17□□□□□ -1.9
SSM4YIL030C SNN1P48232 102 aa3.17□□□□□ -1.9
SSM4YIL030C YNR062CP53748 327 aa3.17□□□□□ -1.9
SSM4YIL030C SVF1Q05515 481 aa3.17□□□□□ -1.9
SSM4YIL030C NDE2Q07500 545 aa3.17□□□□□ -1.9
SSM4YIL030C YPL191CQ08930 360 aa3.17□□□□□ -1.9
SSM4YIL030C TIM9O74700 87 aa3.17□□□□□ -1.9
SSM4YIL030C GLK1P17709 500 aaKnown RBP3.17□□□□□ -1.9
SSM4YIL030C SAG1P20840 650 aa3.17□□□□□ -1.9
SSM4YIL030C SIR1P21691 654 aa3.17□□□□□ -1.9
SSM4YIL030C MTH1P35198 433 aa3.17□□□□□ -1.9
SSM4YIL030C ALG14P38242 237 aa3.17□□□□□ -1.9
SSM4YIL030C PCL5P38794 229 aa3.17□□□□□ -1.9
SSM4YIL030C RNH201P53942 307 aa3.17□□□□□ -1.9
SSM4YIL030C SNA4Q07549 140 aa3.17□□□□□ -1.9
SSM4YIL030C ATX2Q12067 313 aa3.17□□□□□ -1.9
SSM4YIL030C RLM1Q12224 676 aa3.17□□□□□ -1.9
SSM4YIL030C ERV2Q12284 196 aa3.17□□□□□ -1.9
SSM4YIL030C YLR365WQ7LIF2 110 aa3.17□□□□□ -1.9
SSM4YIL030C GSP1P32835 219 aaKnown RBP3.16□□□□□ -1.9
SSM4YIL030C GSP2P32836 220 aaKnown RBP3.16□□□□□ -1.9
SSM4YIL030C PPZ2P33329 710 aa3.16□□□□□ -1.9
SSM4YIL030C YKL077WP36081 392 aa3.16□□□□□ -1.9
SSM4YIL030C UMP1P38293 148 aa3.16□□□□□ -1.9
SSM4YIL030C GDI1P39958 451 aaKnown RBP3.16□□□□□ -1.9
SSM4YIL030C RRD1P40454 393 aaKnown RBP3.16□□□□□ -1.9
SSM4YIL030C SMD3P43321 101 aaKnown RBP3.16□□□□□ -1.9
SSM4YIL030C TAX4P47030 604 aa3.16□□□□□ -1.9
SSM4YIL030C ASK10P48361 1146 aa3.16□□□□□ -1.9
SSM4YIL030C TMA23Q03525 211 aa3.16□□□□□ -1.9
SSM4YIL030C HPF1Q05164 967 aa3.16□□□□□ -1.9
SSM4YIL030C YPL264CQ08980 353 aa3.16□□□□□ -1.9
SSM4YIL030C MCP1Q12106 302 aa3.16□□□□□ -1.9
SSM4YIL030C COA2Q3E823 68 aa3.16□□□□□ -1.9
SSM4YIL030C MRPL44P19956 98 aa3.16□□□□□ -1.9
SSM4YIL030C POP5P28005 173 aa3.16□□□□□ -1.9
SSM4YIL030C OMA1P36163 345 aa3.16□□□□□ -1.9
SSM4YIL030C SFH5P47008 294 aa3.16□□□□□ -1.9
SSM4YIL030C YGL117WP53133 265 aa3.16□□□□□ -1.9
SSM4YIL030C MSO1P53604 210 aaKnown RBP3.16□□□□□ -1.9
SSM4YIL030C YVH1Q02256 364 aaKnown RBP3.16□□□□□ -1.9
SSM4YIL030C THI74Q04083 370 aa3.16□□□□□ -1.9
SSM4YIL030C COQ11Q05892 277 aa3.16□□□□□ -1.9
SSM4YIL030C YOR343CQ12484 108 aa3.16□□□□□ -1.9
SSM4YIL030C RPS21BQ3E754 87 aaKnown RBP3.16□□□□□ -1.9
SSM4YIL030C PET9P18239 318 aaKnown RBP3.16□□□□□ -1.9
SSM4YIL030C RBK1P25332 333 aa3.16□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 42.8 ms