RNA–Protein interactions for RNA: YHR200W

RPN10, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN10, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN10YHR200W PTI1P39927 425 aaPredicted RBP12.19□□□□□ -0.46
RPN10YHR200W XBP1P40489 647 aa12.19□□□□□ -0.46
RPN10YHR200W YKE4P40544 346 aa12.19□□□□□ -0.46
RPN10YHR200W AIM25P47140 327 aa12.19□□□□□ -0.46
RPN10YHR200W VHT1P53241 593 aa12.19□□□□□ -0.46
RPN10YHR200W YDL218WQ07629 317 aa12.19□□□□□ -0.46
RPN10YHR200W INP53Q12271 1107 aa12.19□□□□□ -0.46
RPN10YHR200W HTZ1Q12692 134 aaKnown RBP12.19□□□□□ -0.46
RPN10YHR200W SED4P25365 1065 aa12.18□□□□□ -0.46
RPN10YHR200W AFG1P32317 509 aa12.18□□□□□ -0.46
RPN10YHR200W MKS1P34072 584 aa12.18□□□□□ -0.46
RPN10YHR200W CLG1P35190 452 aa12.18□□□□□ -0.46
RPN10YHR200W KEI1Q06346 221 aa12.18□□□□□ -0.46
RPN10YHR200W MCT1Q12283 360 aa12.18□□□□□ -0.46
RPN10YHR200W IZH2Q12442 317 aa12.18□□□□□ -0.46
RPN10YHR200W MES1P00958 751 aaKnown RBP12.17□□□□□ -0.46
RPN10YHR200W PHO4P07270 312 aaKnown RBP12.17□□□□□ -0.46
RPN10YHR200W CHO1P08456 276 aa12.17□□□□□ -0.46
RPN10YHR200W DBF20P32328 564 aa12.17□□□□□ -0.46
RPN10YHR200W MSS1P32559 526 aaPredicted RBP12.17□□□□□ -0.46
RPN10YHR200W MRPL3P36516 390 aa12.17□□□□□ -0.46
RPN10YHR200W YIP4P53093 235 aa12.17□□□□□ -0.46
RPN10YHR200W YNR048WP53740 393 aa12.17□□□□□ -0.46
RPN10YHR200W MRP51Q02950 344 aa12.17□□□□□ -0.46
RPN10YHR200W YMR265CQ03508 461 aaKnown RBP12.17□□□□□ -0.46
RPN10YHR200W YAP6Q03935 383 aa12.17□□□□□ -0.46
RPN10YHR200W RAF1Q06891 181 aa12.17□□□□□ -0.46
RPN10YHR200W YLR358CO13565 187 aa12.16□□□□□ -0.46
RPN10YHR200W TDH3P00359 332 aaKnown RBP RIP-Chip data12.16□□□□□ -0.46not detected
RPN10YHR200W SPS2P08459 502 aa12.16□□□□□ -0.46
RPN10YHR200W HXT2P23585 541 aa12.16□□□□□ -0.46
RPN10YHR200W TAT1P38085 619 aa12.16□□□□□ -0.46
RPN10YHR200W YMR262WP38430 313 aa12.16□□□□□ -0.46
RPN10YHR200W SOL3P38858 249 aa12.16□□□□□ -0.46
RPN10YHR200W UBX6P47049 396 aa12.16□□□□□ -0.46
RPN10YHR200W MTL1P53214 551 aa12.16□□□□□ -0.46
RPN10YHR200W YNR040WP53736 256 aa12.16□□□□□ -0.46
RPN10YHR200W USB1Q12208 290 aaKnown RBP12.16□□□□□ -0.46
RPN10YHR200W COX17Q12287 69 aa12.16□□□□□ -0.46
RPN10YHR200W CDC23P16522 626 aa12.15□□□□□ -0.46
RPN10YHR200W PUP1P25043 261 aa12.15□□□□□ -0.46
RPN10YHR200W ERG4P25340 473 aa12.15□□□□□ -0.46
RPN10YHR200W CAT5P41735 233 aa12.15□□□□□ -0.46
RPN10YHR200W IDP2P41939 412 aa12.15□□□□□ -0.46
RPN10YHR200W CTK2P46962 323 aa12.15□□□□□ -0.46
RPN10YHR200W GPI14P47088 403 aaKnown RBP12.15□□□□□ -0.46
RPN10YHR200W NIT3P49954 291 aa12.15□□□□□ -0.46
RPN10YHR200W TNA1P53322 534 aa12.15□□□□□ -0.46
RPN10YHR200W RPL6AQ02326 176 aaKnown RBP12.15□□□□□ -0.46
RPN10YHR200W RCE1Q03530 315 aa12.15□□□□□ -0.46
RPN10YHR200W HNT1Q04344 158 aaKnown RBP12.15□□□□□ -0.46
RPN10YHR200W YLR352WQ06479 807 aa12.15□□□□□ -0.46
RPN10YHR200W THI72Q08579 599 aa12.15□□□□□ -0.46
RPN10YHR200W ISA2Q12425 185 aa12.15□□□□□ -0.46
RPN10YHR200W FSH3Q99369 266 aa12.15□□□□□ -0.46
RPN10YHR200W DSF1P0CX08 502 aa12.14□□□□□ -0.47
RPN10YHR200W YNR073CP0CX09 502 aa12.14□□□□□ -0.47
RPN10YHR200W APL3P38065 1025 aa12.14□□□□□ -0.47
RPN10YHR200W AVT7P40501 490 aa12.14□□□□□ -0.47
RPN10YHR200W ACS2P52910 683 aaKnown RBP12.14□□□□□ -0.47
RPN10YHR200W UTP15Q04305 513 aaKnown RBP12.14□□□□□ -0.47
RPN10YHR200W YPL272CQ08984 517 aa12.14□□□□□ -0.47
RPN10YHR200W FUR4P05316 633 aaKnown RBP12.13□□□□□ -0.47
RPN10YHR200W PET18P25362 215 aa12.13□□□□□ -0.47
RPN10YHR200W PPG1P32838 368 aa12.13□□□□□ -0.47
RPN10YHR200W YHR122WP38829 231 aa12.13□□□□□ -0.47
RPN10YHR200W GPG1P53130 126 aa12.13□□□□□ -0.47
RPN10YHR200W MRPS16Q02608 121 aa12.13□□□□□ -0.47
RPN10YHR200W YPR196WQ06595 470 aa12.13□□□□□ -0.47
RPN10YHR200W COX5BP00425 151 aa12.12□□□□□ -0.47
RPN10YHR200W RPL35AP0CX84 120 aaKnown RBP12.12□□□□□ -0.47
RPN10YHR200W RPL35BP0CX85 120 aaKnown RBP12.12□□□□□ -0.47
RPN10YHR200W RFA3P26755 122 aaKnown RBP12.12□□□□□ -0.47
RPN10YHR200W UMP1P38293 148 aa12.12□□□□□ -0.47
RPN10YHR200W GPP1P41277 250 aaKnown RBP12.12□□□□□ -0.47
RPN10YHR200W BXI1P48558 297 aa12.12□□□□□ -0.47
RPN10YHR200W ALG12P53730 551 aa12.12□□□□□ -0.47
RPN10YHR200W RNH201P53942 307 aa12.12□□□□□ -0.47
RPN10YHR200W HHT1P61830 136 aa12.12□□□□□ -0.47
RPN10YHR200W MRPL13Q02204 264 aa12.12□□□□□ -0.47
RPN10YHR200W TY1A-MR1Q04215 440 aa12.12□□□□□ -0.47
RPN10YHR200W HEM25Q07534 307 aa12.12□□□□□ -0.47
RPN10YHR200W ODC2Q99297 307 aa12.12□□□□□ -0.47
RPN10YHR200W IPP1P00817 287 aaKnown RBP12.11□□□□□ -0.47
RPN10YHR200W RPL6BP05739 176 aaKnown RBP12.11□□□□□ -0.47
RPN10YHR200W SPS4P09937 338 aa12.11□□□□□ -0.47
RPN10YHR200W RPL30P14120 105 aaKnown RBP12.11□□□□□ -0.47
RPN10YHR200W URA6P15700 204 aa12.11□□□□□ -0.47
RPN10YHR200W PPZ2P33329 710 aa12.11□□□□□ -0.47
RPN10YHR200W SRL3P36167 246 aa12.11□□□□□ -0.47
RPN10YHR200W LSM1P47017 172 aaKnown RBP12.11□□□□□ -0.47
RPN10YHR200W AVT4P50944 713 aa12.11□□□□□ -0.47
RPN10YHR200W YGL159WP53110 370 aa12.11□□□□□ -0.47
RPN10YHR200W YLR283WQ05867 314 aa12.11□□□□□ -0.47
RPN10YHR200W MRX9Q07349 420 aaKnown RBP12.11□□□□□ -0.47
RPN10YHR200W YLR031WQ07978 186 aa12.11□□□□□ -0.47
RPN10YHR200W YLR125WQ12138 136 aa12.11□□□□□ -0.47
RPN10YHR200W HEM4P06174 275 aa12.1□□□□□ -0.47
RPN10YHR200W RNP1P32385 249 aa12.1□□□□□ -0.47
RPN10YHR200W YGR042WP53227 271 aa12.1□□□□□ -0.47
Retrieved 100 of 5,963 RNA–protein pairs in 182.9 ms