RNA–Protein interactions for RNA: YHR088W

RPF1, Transcript of Protein involved in assembly and export of the large ribosomal subunit, yeastyeast

Gene RPF1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF1YHR088W MAL12P53341 584 aa1.09□□□□□ -2.23
RPF1YHR088W ATC1Q04005 294 aa1.09□□□□□ -2.23
RPF1YHR088W PST1Q12355 444 aa1.09□□□□□ -2.23
RPF1YHR088W TPM1P17536 199 aaKnown RBP1.08□□□□□ -2.24
RPF1YHR088W GPI12P23797 304 aa1.08□□□□□ -2.24
RPF1YHR088W SWI3P32591 825 aa1.08□□□□□ -2.24
RPF1YHR088W HIS2P38635 335 aa1.08□□□□□ -2.24
RPF1YHR088W RCY1P39531 840 aa1.08□□□□□ -2.24
RPF1YHR088W PRM9P39551 298 aa1.08□□□□□ -2.24
RPF1YHR088W OST2P46964 130 aa1.08□□□□□ -2.24
RPF1YHR088W RSM10Q03201 203 aa1.08□□□□□ -2.24
RPF1YHR088W PRM15Q03262 622 aa1.08□□□□□ -2.24
RPF1YHR088W MZM1Q03429 123 aaPredicted RBP1.08□□□□□ -2.24
RPF1YHR088W BOP2Q06150 570 aa1.08□□□□□ -2.24
RPF1YHR088W PGC1Q08959 321 aa1.08□□□□□ -2.24
RPF1YHR088W MHT1Q12525 324 aa1.08□□□□□ -2.24
RPF1YHR088W RPL4AP10664 362 aaKnown RBP1.07□□□□□ -2.24
RPF1YHR088W FBA1P14540 359 aaKnown RBP1.07□□□□□ -2.24
RPF1YHR088W SHC1P39000 512 aa1.07□□□□□ -2.24
RPF1YHR088W MNN9P39107 395 aaKnown RBP1.07□□□□□ -2.24
RPF1YHR088W SER33P40510 469 aa1.07□□□□□ -2.24
RPF1YHR088W RPL4BP49626 362 aaKnown RBP1.07□□□□□ -2.24
RPF1YHR088W AAH1P53909 347 aa1.07□□□□□ -2.24
RPF1YHR088W EMI1Q04406 187 aa1.07□□□□□ -2.24
RPF1YHR088W BCP1Q06338 283 aa1.07□□□□□ -2.24
RPF1YHR088W CUR1Q06469 252 aa1.07□□□□□ -2.24
RPF1YHR088W YOL162WP0CF19 215 aa1.06□□□□□ -2.24
RPF1YHR088W ICL1P28240 557 aaPredicted RBP1.06□□□□□ -2.24
RPF1YHR088W CWP1P28319 239 aa1.06□□□□□ -2.24
RPF1YHR088W PEX4P29340 183 aa1.06□□□□□ -2.24
RPF1YHR088W BLI1P35727 113 aa1.06□□□□□ -2.24
RPF1YHR088W PEX31P53203 462 aa1.06□□□□□ -2.24
RPF1YHR088W VBA1Q04301 562 aa1.06□□□□□ -2.24
RPF1YHR088W SFH1Q06168 426 aa1.06□□□□□ -2.24
RPF1YHR088W SCL1P21243 252 aaKnown RBP1.05□□□□□ -2.24
RPF1YHR088W NBP35P52920 328 aa1.05□□□□□ -2.24
RPF1YHR088W TIM21P53220 239 aa1.05□□□□□ -2.24
RPF1YHR088W CPD1P53314 239 aa1.05□□□□□ -2.24
RPF1YHR088W PEX10Q05568 337 aa1.05□□□□□ -2.24
RPF1YHR088W EMP46Q12396 444 aa1.05□□□□□ -2.24
RPF1YHR088W RAS2P01120 322 aaKnown RBP1.04□□□□□ -2.24
RPF1YHR088W FRS2P15625 503 aaKnown RBP1.04□□□□□ -2.24
RPF1YHR088W YHL049CP38722 271 aa1.04□□□□□ -2.24
RPF1YHR088W SMD3P43321 101 aaKnown RBP1.04□□□□□ -2.24
RPF1YHR088W CIS3P47001 227 aa1.04□□□□□ -2.24
RPF1YHR088W YNL260CP53846 198 aa1.04□□□□□ -2.24
RPF1YHR088W SWS2P53937 143 aa1.04□□□□□ -2.24
RPF1YHR088W SPO19Q03029 223 aa1.04□□□□□ -2.24
RPF1YHR088W ABZ2Q03266 374 aa1.04□□□□□ -2.24
RPF1YHR088W YDR286CQ05530 114 aa1.04□□□□□ -2.24
RPF1YHR088W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.04□□□□□ -2.24not detected
RPF1YHR088W SLD7Q08457 257 aa1.04□□□□□ -2.24
RPF1YHR088W ARC15P40518 154 aaRIP-Chip data1.03□□□□□ -2.24not detected
RPF1YHR088W CTF19Q02732 369 aa1.03□□□□□ -2.24
RPF1YHR088W FKS1P38631 1876 aaKnown RBP1.03□□□□□ -2.25
RPF1YHR088W RPP0P05317 312 aaKnown RBP1.02□□□□□ -2.25
RPF1YHR088W RPC40P07703 335 aaKnown RBP1.02□□□□□ -2.25
RPF1YHR088W DSF1P0CX08 502 aa1.02□□□□□ -2.25
RPF1YHR088W YNR073CP0CX09 502 aa1.02□□□□□ -2.25
RPF1YHR088W MDH2P22133 377 aa1.02□□□□□ -2.25
RPF1YHR088W CSM1P25651 190 aa1.02□□□□□ -2.25
RPF1YHR088W STH1P32597 1359 aa1.02□□□□□ -2.25
RPF1YHR088W YKR045CP36138 183 aa1.02□□□□□ -2.25
RPF1YHR088W PRS4P38063 326 aaPredicted RBP1.02□□□□□ -2.25
RPF1YHR088W DSE2P38844 325 aa1.02□□□□□ -2.25
RPF1YHR088W BMT5P40493 336 aa1.02□□□□□ -2.25
RPF1YHR088W AKR2Q12013 749 aa1.02□□□□□ -2.25
RPF1YHR088W PER33Q12144 273 aa1.02□□□□□ -2.25
RPF1YHR088W DCN1Q12395 269 aa1.02□□□□□ -2.25
RPF1YHR088W SEC22P22214 214 aa1.01□□□□□ -2.25
RPF1YHR088W YGL010WP25338 174 aa1.01□□□□□ -2.25
RPF1YHR088W MDH3P32419 343 aaKnown RBP RIP-Chip data1.01□□□□□ -2.25not detected
RPF1YHR088W HEK2P38199 381 aaKnown RBP RIP-Chip data1.01□□□□□ -2.25not detected
RPF1YHR088W COS8P38723 381 aa1.01□□□□□ -2.25
RPF1YHR088W VTC1P40046 129 aaRIP-Chip data1.01□□□□□ -2.25not detected
RPF1YHR088W MNT4P53745 580 aa1.01□□□□□ -2.25
RPF1YHR088W YMR279CQ03263 540 aa1.01□□□□□ -2.25
RPF1YHR088W MRPS8Q03799 155 aa1.01□□□□□ -2.25
RPF1YHR088W Q0255P03881 472 aa1□□□□□ -2.25
RPF1YHR088W TRX1P22217 103 aaKnown RBP1□□□□□ -2.25
RPF1YHR088W POF1P25576 258 aa1□□□□□ -2.25
RPF1YHR088W RCN1P36054 211 aa1□□□□□ -2.25
RPF1YHR088W PHO88P38264 188 aaPredicted RBP1□□□□□ -2.25
RPF1YHR088W YBR220CP38318 560 aa1□□□□□ -2.25
RPF1YHR088W AVT2P39981 480 aa1□□□□□ -2.25
RPF1YHR088W ERG25P53045 309 aa1□□□□□ -2.25
RPF1YHR088W YGR026WP53217 278 aa1□□□□□ -2.25
RPF1YHR088W NUP49Q02199 472 aa1□□□□□ -2.25
RPF1YHR088W ERV41Q04651 352 aa1□□□□□ -2.25
RPF1YHR088W SME1Q12330 94 aaPredicted RBP1□□□□□ -2.25
RPF1YHR088W UGA1P17649 471 aa0.99□□□□□ -2.25
RPF1YHR088W GCD14P46959 383 aaPredicted RBP0.99□□□□□ -2.25
RPF1YHR088W LSB1P53281 241 aa0.99□□□□□ -2.25
RPF1YHR088W ARP5P53946 755 aa0.99□□□□□ -2.25
RPF1YHR088W CDC14Q00684 551 aa0.99□□□□□ -2.25
RPF1YHR088W DDI2P0CH63 225 aa0.98□□□□□ -2.25
RPF1YHR088W DDI3P0CH64 225 aa0.98□□□□□ -2.25
RPF1YHR088W GLE2P40066 365 aa0.98□□□□□ -2.25
RPF1YHR088W OSW5P40219 148 aa0.98□□□□□ -2.25
RPF1YHR088W ARV1Q06541 321 aa0.98□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 51.8 ms