RNA–Protein interactions for RNA: YHR066W

SSF1, Transcript of Constituent of 66S pre-ribosomal particles, yeastyeast

Gene SSF1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF1YHR066W HCH1P53834 153 aa1.91□□□□□ -2.1
SSF1YHR066W ALG11P53954 548 aaKnown RBP1.91□□□□□ -2.1
SSF1YHR066W YPL077CQ02831 240 aa1.91□□□□□ -2.1
SSF1YHR066W MYO5Q04439 1219 aaKnown RBP1.91□□□□□ -2.1
SSF1YHR066W GTO3Q04806 366 aa1.91□□□□□ -2.1
SSF1YHR066W ASR1Q06834 288 aa1.91□□□□□ -2.1
SSF1YHR066W PAM18Q07914 168 aa1.91□□□□□ -2.1
SSF1YHR066W CPT1P17898 393 aa1.9□□□□□ -2.11
SSF1YHR066W VPS1P21576 704 aaKnown RBP1.9□□□□□ -2.11
SSF1YHR066W RAD51P25454 400 aa1.9□□□□□ -2.11
SSF1YHR066W MEI5P32489 222 aa1.9□□□□□ -2.11
SSF1YHR066W SRB4P32569 687 aa1.9□□□□□ -2.11
SSF1YHR066W KTI12P34253 313 aaKnown RBP1.9□□□□□ -2.11
SSF1YHR066W YKL063CP35725 167 aa1.9□□□□□ -2.11
SSF1YHR066W RPC37P36121 282 aa1.9□□□□□ -2.11
SSF1YHR066W AIM29P36154 155 aa1.9□□□□□ -2.11
SSF1YHR066W RFT1P38206 574 aaPredicted RBP1.9□□□□□ -2.11
SSF1YHR066W LDB7P38210 180 aa1.9□□□□□ -2.11
SSF1YHR066W SIP3P38717 1229 aa1.9□□□□□ -2.11
SSF1YHR066W GDS1P41913 522 aa1.9□□□□□ -2.11
SSF1YHR066W HIT1P46973 164 aa1.9□□□□□ -2.11
SSF1YHR066W SDS23P53172 527 aa1.9□□□□□ -2.11
SSF1YHR066W GIM3P53900 129 aa1.9□□□□□ -2.11
SSF1YHR066W MRPS17Q03246 237 aaPredicted RBP1.9□□□□□ -2.11
SSF1YHR066W OST6Q03723 332 aa1.9□□□□□ -2.11
SSF1YHR066W SNX41Q04053 625 aa1.9□□□□□ -2.11
SSF1YHR066W VBA1Q04301 562 aa1.9□□□□□ -2.11
SSF1YHR066W GMC1Q04399 608 aa1.9□□□□□ -2.11
SSF1YHR066W ADH6Q04894 360 aaKnown RBP1.9□□□□□ -2.11
SSF1YHR066W DIB1Q06819 143 aaPredicted RBP1.9□□□□□ -2.11
SSF1YHR066W RDL2Q08742 149 aaKnown RBP1.9□□□□□ -2.11
SSF1YHR066W MSH5Q12175 901 aa1.9□□□□□ -2.11
SSF1YHR066W YOS9Q99220 542 aa1.9□□□□□ -2.11
SSF1YHR066W IZH4Q99393 312 aa1.9□□□□□ -2.11
SSF1YHR066W GEA1P47102 1408 aaPredicted RBP1.9□□□□□ -2.11
SSF1YHR066W RPO26P20435 155 aa1.89□□□□□ -2.11
SSF1YHR066W ASF2P32448 525 aaPredicted RBP1.89□□□□□ -2.11
SSF1YHR066W MRPL6P32904 214 aa1.89□□□□□ -2.11
SSF1YHR066W YKL187CP34231 750 aa1.89□□□□□ -2.11
SSF1YHR066W MCH2P36032 473 aa1.89□□□□□ -2.11
SSF1YHR066W TDA11P38854 504 aa1.89□□□□□ -2.11
SSF1YHR066W PET8P38921 284 aa1.89□□□□□ -2.11
SSF1YHR066W NPT1P39683 429 aaKnown RBP1.89□□□□□ -2.11
SSF1YHR066W SPO73P40031 143 aa1.89□□□□□ -2.11
SSF1YHR066W YIL059CP40520 121 aa1.89□□□□□ -2.11
SSF1YHR066W GSC2P40989 1895 aa1.89□□□□□ -2.11
SSF1YHR066W UBC13P52490 153 aa1.89□□□□□ -2.11
SSF1YHR066W CPD1P53314 239 aa1.89□□□□□ -2.11
SSF1YHR066W MRPL50P53724 139 aa1.89□□□□□ -2.11
SSF1YHR066W NOP13P53883 403 aaKnown RBP RIP-Chip data1.89□□□□□ -2.11not detected
SSF1YHR066W IGO1P53897 168 aa1.89□□□□□ -2.11
SSF1YHR066W CDC14Q00684 551 aa1.89□□□□□ -2.11
SSF1YHR066W SSQ1Q05931 657 aaPredicted RBP1.89□□□□□ -2.11
SSF1YHR066W MRX9Q07349 420 aaKnown RBP1.89□□□□□ -2.11
SSF1YHR066W PRM4Q12498 284 aa1.89□□□□□ -2.11
SSF1YHR066W HIS1P00498 297 aaKnown RBP1.88□□□□□ -2.11
SSF1YHR066W MRP1P10662 321 aaKnown RBP1.88□□□□□ -2.11
SSF1YHR066W CUP2P15315 225 aa1.88□□□□□ -2.11
SSF1YHR066W POF1P25576 258 aa1.88□□□□□ -2.11
SSF1YHR066W PBN1P25580 416 aa1.88□□□□□ -2.11
SSF1YHR066W MGM101P32787 269 aaKnown RBP1.88□□□□□ -2.11
SSF1YHR066W CSE1P33307 960 aa1.88□□□□□ -2.11
SSF1YHR066W YPC1P38298 316 aa1.88□□□□□ -2.11
SSF1YHR066W SOP4P39543 234 aaPredicted RBP1.88□□□□□ -2.11
SSF1YHR066W SWC4P53201 476 aa1.88□□□□□ -2.11
SSF1YHR066W KRE28Q04431 385 aa1.88□□□□□ -2.11
SSF1YHR066W POM33Q12164 279 aa1.88□□□□□ -2.11
SSF1YHR066W UTP23Q12339 254 aaKnown RBP1.88□□□□□ -2.11
SSF1YHR066W ILV1P00927 576 aaKnown RBP1.87□□□□□ -2.11
SSF1YHR066W RHO1P06780 209 aaKnown RBP1.87□□□□□ -2.11
SSF1YHR066W RPS23AP0CX29 145 aaKnown RBP1.87□□□□□ -2.11
SSF1YHR066W RPS23BP0CX30 145 aa1.87□□□□□ -2.11
SSF1YHR066W NHP6BP11633 99 aaKnown RBP1.87□□□□□ -2.11
SSF1YHR066W TFS1P14306 219 aa1.87□□□□□ -2.11
SSF1YHR066W COQ1P18900 473 aa1.87□□□□□ -2.11
SSF1YHR066W DAL81P21657 970 aa1.87□□□□□ -2.11
SSF1YHR066W RPL24BP24000 155 aaKnown RBP1.87□□□□□ -2.11
SSF1YHR066W RPL16BP26785 198 aaKnown RBP1.87□□□□□ -2.11
SSF1YHR066W PPA2P28239 310 aa1.87□□□□□ -2.11
SSF1YHR066W CAB3P36076 571 aa1.87□□□□□ -2.11
SSF1YHR066W MRX3P38172 270 aa1.87□□□□□ -2.11
SSF1YHR066W PRS2P38620 318 aaKnown RBP1.87□□□□□ -2.11
SSF1YHR066W YER034WP40022 185 aaKnown RBP1.87□□□□□ -2.11
SSF1YHR066W DDI1P40087 428 aa1.87□□□□□ -2.11
SSF1YHR066W TAD2P47058 250 aa1.87□□□□□ -2.11
SSF1YHR066W HOC1P47124 396 aa1.87□□□□□ -2.11
SSF1YHR066W YNL040WP53960 456 aaPredicted RBP1.87□□□□□ -2.11
SSF1YHR066W SNZ1Q03148 297 aa1.87□□□□□ -2.11
SSF1YHR066W BNA7Q04066 261 aa1.87□□□□□ -2.11
SSF1YHR066W SPO77Q06134 477 aa1.87□□□□□ -2.11
SSF1YHR066W YLR446WQ06204 433 aa1.87□□□□□ -2.11
SSF1YHR066W TAZ1Q06510 381 aa1.87□□□□□ -2.11
SSF1YHR066W CLP1Q08685 445 aaPredicted RBP1.87□□□□□ -2.11
SSF1YHR066W SNF8Q12483 233 aa1.87□□□□□ -2.11
SSF1YHR066W YPR064WQ12492 139 aa1.87□□□□□ -2.11
SSF1YHR066W THP2O13539 261 aaKnown RBP1.86□□□□□ -2.11
SSF1YHR066W RPP0P05317 312 aaKnown RBP1.86□□□□□ -2.11
SSF1YHR066W CDC33P07260 213 aaKnown RBP1.86□□□□□ -2.11
SSF1YHR066W ERD1P16151 362 aa1.86□□□□□ -2.11
SSF1YHR066W MRPL20P22354 195 aaPredicted RBP1.86□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 40.7 ms