RNA–Protein interactions for RNA: YHL006C

SHU1, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU1YHL006C PEX32P38292 413 aa11.19□□□□□ -0.62
SHU1YHL006C SMM1P53720 384 aaKnown RBP11.19□□□□□ -0.62
SHU1YHL006C RNH201P53942 307 aa11.19□□□□□ -0.62
SHU1YHL006C FRE3Q08905 711 aa11.19□□□□□ -0.62
SHU1YHL006C USB1Q12208 290 aaKnown RBP11.19□□□□□ -0.62
SHU1YHL006C ERP4Q12450 207 aa11.19□□□□□ -0.62
SHU1YHL006C VCX1Q99385 411 aa11.19□□□□□ -0.62
SHU1YHL006C YLF2P38746 405 aa11.18□□□□□ -0.62
SHU1YHL006C YDR114CQ04597 100 aa11.18□□□□□ -0.62
SHU1YHL006C ENA1P13587 1091 aa11.17□□□□□ -0.62
SHU1YHL006C YOX1P34161 385 aa11.17□□□□□ -0.62
SHU1YHL006C TCM62P38228 572 aaKnown RBP11.17□□□□□ -0.62
SHU1YHL006C FMC1P40491 155 aa11.17□□□□□ -0.62
SHU1YHL006C NRK1P53915 240 aa11.17□□□□□ -0.62
SHU1YHL006C YLR152CP54072 576 aa11.17□□□□□ -0.62
SHU1YHL006C ENA2Q01896 1091 aa11.17□□□□□ -0.62
SHU1YHL006C TLG1Q03322 224 aa11.17□□□□□ -0.62
SHU1YHL006C YLR346CQ06139 101 aa11.17□□□□□ -0.62
SHU1YHL006C GSH2Q08220 491 aa11.17□□□□□ -0.62
SHU1YHL006C ENA5Q12691 1091 aa11.17□□□□□ -0.62
SHU1YHL006C SAG1P20840 650 aa11.16□□□□□ -0.62
SHU1YHL006C YER188WP40103 239 aa11.16□□□□□ -0.62
SHU1YHL006C DLS1P40366 167 aa11.16□□□□□ -0.62
SHU1YHL006C PMT6P42934 759 aa11.16□□□□□ -0.62
SHU1YHL006C YIP4P53093 235 aa11.16□□□□□ -0.62
SHU1YHL006C GEP7P53171 287 aa11.16□□□□□ -0.62
SHU1YHL006C YNR064CP53750 290 aa11.16□□□□□ -0.62
SHU1YHL006C DUG3P53871 357 aa11.16□□□□□ -0.62
SHU1YHL006C APJ1P53940 528 aa11.16□□□□□ -0.62
SHU1YHL006C RIM9Q04734 239 aa11.16□□□□□ -0.62
SHU1YHL006C RFU1Q08003 200 aa11.16□□□□□ -0.62
SHU1YHL006C FRE5Q08908 694 aa11.16□□□□□ -0.62
SHU1YHL006C YOL114CQ12322 202 aa11.16□□□□□ -0.62
SHU1YHL006C ECM4P36156 370 aa11.15□□□□□ -0.62
SHU1YHL006C SLM1P40485 686 aa11.15□□□□□ -0.62
SHU1YHL006C GZF3P42944 551 aaKnown RBP11.15□□□□□ -0.62
SHU1YHL006C PAM16P42949 149 aa11.15□□□□□ -0.62
SHU1YHL006C YGL159WP53110 370 aa11.15□□□□□ -0.62
SHU1YHL006C PRM15Q03262 622 aa11.15□□□□□ -0.62
SHU1YHL006C YMR252CQ04814 134 aa11.15□□□□□ -0.62
SHU1YHL006C ZRT3P34240 503 aa11.14□□□□□ -0.63
SHU1YHL006C RMD6P39975 231 aa11.14□□□□□ -0.63
SHU1YHL006C PAU12P53343 120 aa11.14□□□□□ -0.63
SHU1YHL006C YDR248CQ03786 193 aa11.14□□□□□ -0.63
SHU1YHL006C HLR1Q04429 423 aa11.14□□□□□ -0.63
SHU1YHL006C TSR2Q06672 205 aaKnown RBP11.14□□□□□ -0.63
SHU1YHL006C TGS1Q12052 315 aa11.14□□□□□ -0.63
SHU1YHL006C TRM10Q12400 293 aa11.14□□□□□ -0.63
SHU1YHL006C FRE6Q12473 712 aa11.14□□□□□ -0.63
SHU1YHL006C LYS20P48570 428 aaKnown RBP11.13□□□□□ -0.63
SHU1YHL006C SLI1P53304 468 aa11.13□□□□□ -0.63
SHU1YHL006C MSA1Q08471 629 aa11.13□□□□□ -0.63
SHU1YHL006C LYS21Q12122 440 aaKnown RBP11.13□□□□□ -0.63
SHU1YHL006C SGA1P08019 549 aa11.12□□□□□ -0.63
SHU1YHL006C FUN26P31381 517 aa11.12□□□□□ -0.63
SHU1YHL006C AFG1P32317 509 aa11.12□□□□□ -0.63
SHU1YHL006C MKS1P34072 584 aa11.12□□□□□ -0.63
SHU1YHL006C YER079WP40052 210 aaKnown RBP11.12□□□□□ -0.63
SHU1YHL006C ERJ5P43613 295 aaPredicted RBP11.12□□□□□ -0.63
SHU1YHL006C YKR005CQ02203 525 aa11.12□□□□□ -0.63
SHU1YHL006C YMR317WQ04893 1140 aa11.12□□□□□ -0.63
SHU1YHL006C YOR029WQ12243 111 aa11.12□□□□□ -0.63
SHU1YHL006C YPR1Q12458 312 aa11.12□□□□□ -0.63
SHU1YHL006C HXT2P23585 541 aa11.11□□□□□ -0.63
SHU1YHL006C VPS17P32913 551 aa11.11□□□□□ -0.63
SHU1YHL006C PPZ2P33329 710 aa11.11□□□□□ -0.63
SHU1YHL006C SDS24P38314 527 aa11.11□□□□□ -0.63
SHU1YHL006C SSH1P38353 490 aaKnown RBP11.11□□□□□ -0.63
SHU1YHL006C SSZ1P38788 538 aaKnown RBP11.11□□□□□ -0.63
SHU1YHL006C YND1P40009 630 aa11.11□□□□□ -0.63
SHU1YHL006C NTA1P40354 457 aa11.11□□□□□ -0.63
SHU1YHL006C GON7P46984 123 aa11.11□□□□□ -0.63
SHU1YHL006C TAF4P50105 388 aa11.11□□□□□ -0.63
SHU1YHL006C NMA1Q06178 401 aaKnown RBP11.11□□□□□ -0.63
SHU1YHL006C MED11Q99278 115 aa11.11□□□□□ -0.63
SHU1YHL006C SIR2P06700 562 aa11.1□□□□□ -0.63
SHU1YHL006C MDH1P17505 334 aaKnown RBP RIP-Chip data11.1□□□□□ -0.63not detected
SHU1YHL006C MTC2P34246 357 aa11.1□□□□□ -0.63
SHU1YHL006C PAU24P38155 120 aa11.1□□□□□ -0.63
SHU1YHL006C GPI18P38211 433 aa11.1□□□□□ -0.63
SHU1YHL006C MSS2P40990 351 aa11.1□□□□□ -0.63
SHU1YHL006C AVT4P50944 713 aa11.1□□□□□ -0.63
SHU1YHL006C SUT1P53032 299 aaKnown RBP11.1□□□□□ -0.63
SHU1YHL006C YGL204CP53089 101 aa11.1□□□□□ -0.63
SHU1YHL006C LUC7Q07508 261 aaPredicted RBP11.1□□□□□ -0.63
SHU1YHL006C FCY22Q12119 530 aa11.1□□□□□ -0.63
SHU1YHL006C TDH2P00358 332 aaKnown RBP11.09□□□□□ -0.63
SHU1YHL006C COX9P07255 59 aa11.09□□□□□ -0.63
SHU1YHL006C GCD1P09032 578 aaPredicted RBP11.09□□□□□ -0.63
SHU1YHL006C MRP1P10662 321 aaKnown RBP11.09□□□□□ -0.63
SHU1YHL006C MTH1P35198 433 aa11.09□□□□□ -0.63
SHU1YHL006C UTP15Q04305 513 aaKnown RBP11.09□□□□□ -0.63
SHU1YHL006C SPR28Q04921 423 aa11.09□□□□□ -0.63
SHU1YHL006C ASR1Q06834 288 aa11.09□□□□□ -0.63
SHU1YHL006C HEM25Q07534 307 aa11.09□□□□□ -0.63
SHU1YHL006C IRC25Q07951 179 aa11.09□□□□□ -0.63
SHU1YHL006C YMR105W-AQ8TGS8 64 aa11.09□□□□□ -0.63
SHU1YHL006C TIF3P34167 436 aaKnown RBP11.08□□□□□ -0.64
SHU1YHL006C NSA1P53136 463 aaPredicted RBP11.08□□□□□ -0.64
SHU1YHL006C PRP11Q07350 266 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 5,963 RNA–protein pairs in 106.9 ms