RNA–Protein interactions for RNA: YGR156W

PTI1, Transcript of Essential component of CPF (cleavage and polyadenylation factor), yeastyeast

Gene PTI1, Length 1,278 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTI1YGR156W TAD2P47058 250 aa2.82□□□□□ -1.96
PTI1YGR156W SWS2P53937 143 aa2.82□□□□□ -1.96
PTI1YGR156W MRX11Q03079 207 aa2.82□□□□□ -1.96
PTI1YGR156W OST6Q03723 332 aa2.82□□□□□ -1.96
PTI1YGR156W VHS1Q03785 461 aa2.82□□□□□ -1.96
PTI1YGR156W YDR115WQ04598 105 aa2.82□□□□□ -1.96
PTI1YGR156W LIP2Q06005 328 aa2.82□□□□□ -1.96
PTI1YGR156W CSM4Q08955 156 aa2.82□□□□□ -1.96
PTI1YGR156W MSH5Q12175 901 aa2.82□□□□□ -1.96
PTI1YGR156W JIP3O13555 125 aa2.81□□□□□ -1.96
PTI1YGR156W TDH2P00358 332 aaKnown RBP2.81□□□□□ -1.96
PTI1YGR156W TPI1P00942 248 aaKnown RBP2.81□□□□□ -1.96
PTI1YGR156W POX1P13711 748 aa2.81□□□□□ -1.96
PTI1YGR156W PRS1P32895 427 aaKnown RBP2.81□□□□□ -1.96
PTI1YGR156W MSN4P33749 630 aa2.81□□□□□ -1.96
PTI1YGR156W RFT1P38206 574 aaPredicted RBP2.81□□□□□ -1.96
PTI1YGR156W YER184CP39961 794 aa2.81□□□□□ -1.96
PTI1YGR156W OTU1P43558 301 aa2.81□□□□□ -1.96
PTI1YGR156W NBP35P52920 328 aa2.81□□□□□ -1.96
PTI1YGR156W NRM1P53718 249 aa2.81□□□□□ -1.96
PTI1YGR156W ACT1P60010 375 aaKnown RBP2.81□□□□□ -1.96
PTI1YGR156W API2Q04413 109 aa2.81□□□□□ -1.96
PTI1YGR156W KRE28Q04431 385 aa2.81□□□□□ -1.96
PTI1YGR156W SEC13Q04491 297 aaKnown RBP2.81□□□□□ -1.96
PTI1YGR156W PAM18Q07914 168 aa2.81□□□□□ -1.96
PTI1YGR156W TMC1Q08422 150 aaPredicted RBP2.81□□□□□ -1.96
PTI1YGR156W VIK1Q12045 647 aa2.81□□□□□ -1.96
PTI1YGR156W YDR524C-BQ3E6R4 66 aa2.81□□□□□ -1.96
PTI1YGR156W TOR2P32600 2474 aaKnown RBP2.8□□□□□ -1.96
PTI1YGR156W HSP26P15992 214 aaKnown RBP RIP-Chip data2.8□□□□□ -1.96not detected
PTI1YGR156W ATG15P25641 520 aa2.8□□□□□ -1.96
PTI1YGR156W EHD3P28817 500 aa2.8□□□□□ -1.96
PTI1YGR156W FRM2P37261 193 aa2.8□□□□□ -1.96
PTI1YGR156W ATG12P38316 186 aa2.8□□□□□ -1.96
PTI1YGR156W WSC4P38739 605 aa2.8□□□□□ -1.96
PTI1YGR156W SER33P40510 469 aa2.8□□□□□ -1.96
PTI1YGR156W DSN1P40568 576 aa2.8□□□□□ -1.96
PTI1YGR156W ASG7P46993 209 aa2.8□□□□□ -1.96
PTI1YGR156W GLG2P47011 380 aa2.8□□□□□ -1.96
PTI1YGR156W YPS5P53057 165 aa2.8□□□□□ -1.96
PTI1YGR156W LIF1P53150 421 aa2.8□□□□□ -1.96
PTI1YGR156W PEX31P53203 462 aa2.8□□□□□ -1.96
PTI1YGR156W MAL13P53338 473 aa2.8□□□□□ -1.96
PTI1YGR156W MRPS16Q02608 121 aa2.8□□□□□ -1.96
PTI1YGR156W RPL21AQ02753 160 aaKnown RBP2.8□□□□□ -1.96
PTI1YGR156W SDC1Q03323 175 aa2.8□□□□□ -1.96
PTI1YGR156W SEC10Q06245 871 aa2.8□□□□□ -1.96
PTI1YGR156W SRO7Q12038 1033 aa2.8□□□□□ -1.96
PTI1YGR156W TRM10Q12400 293 aa2.8□□□□□ -1.96
PTI1YGR156W RAX2Q12465 1220 aa2.8□□□□□ -1.96
PTI1YGR156W YAL064W-BO13512 126 aa2.79□□□□□ -1.96
PTI1YGR156W CBP6P07253 162 aaPredicted RBP2.79□□□□□ -1.96
PTI1YGR156W ASP3-2P0CX77 362 aa2.79□□□□□ -1.96
PTI1YGR156W ASP3-3P0CX78 362 aa2.79□□□□□ -1.96
PTI1YGR156W ASP3-4P0CX79 362 aa2.79□□□□□ -1.96
PTI1YGR156W ASP3-1P0CZ17 362 aa2.79□□□□□ -1.96
PTI1YGR156W PEX3P28795 441 aa2.79□□□□□ -1.96
PTI1YGR156W NTG1P31378 399 aa2.79□□□□□ -1.96
PTI1YGR156W RME1P32338 300 aaKnown RBP2.79□□□□□ -1.96
PTI1YGR156W ALK2P32789 676 aaPredicted RBP2.79□□□□□ -1.96
PTI1YGR156W CDC13P32797 924 aaKnown RBP2.79□□□□□ -1.96
PTI1YGR156W AIM29P36154 155 aa2.79□□□□□ -1.96
PTI1YGR156W SMB1P40018 196 aaKnown RBP2.79□□□□□ -1.96
PTI1YGR156W MSS2P40990 351 aa2.79□□□□□ -1.96
PTI1YGR156W RPL10P41805 221 aaKnown RBP2.79□□□□□ -1.96
PTI1YGR156W YFL064CP43540 174 aa2.79□□□□□ -1.96
PTI1YGR156W MIC19P43594 170 aa2.79□□□□□ -1.96
PTI1YGR156W YGR018CP53211 109 aa2.79□□□□□ -1.96
PTI1YGR156W FMP48P53233 369 aa2.79□□□□□ -1.96
PTI1YGR156W VPS60Q03390 229 aa2.79□□□□□ -1.96
PTI1YGR156W ECM19Q06011 112 aa2.79□□□□□ -1.96
PTI1YGR156W PIN3Q06449 215 aa2.79□□□□□ -1.96
PTI1YGR156W SGT2Q12118 346 aaKnown RBP2.79□□□□□ -1.96
PTI1YGR156W SNF8Q12483 233 aa2.79□□□□□ -1.96
PTI1YGR156W YOS9Q99220 542 aa2.79□□□□□ -1.96
PTI1YGR156W NUM1Q00402 2748 aa2.79□□□□□ -1.96
PTI1YGR156W ADH1P00330 348 aaKnown RBP2.78□□□□□ -1.96
PTI1YGR156W MRP1P10662 321 aaKnown RBP2.78□□□□□ -1.96
PTI1YGR156W YCR025CP25352 136 aa2.78□□□□□ -1.96
PTI1YGR156W YCR016WP25617 290 aaKnown RBP2.78□□□□□ -1.96
PTI1YGR156W SPS19P32573 292 aaKnown RBP2.78□□□□□ -1.96
PTI1YGR156W IES6P32617 166 aa2.78□□□□□ -1.96
PTI1YGR156W PHO88P38264 188 aaPredicted RBP2.78□□□□□ -1.96
PTI1YGR156W HOC1P47124 396 aa2.78□□□□□ -1.96
PTI1YGR156W NOP13P53883 403 aaKnown RBP RIP-Chip data2.78□□□□□ -1.96not detected
PTI1YGR156W MYO5Q04439 1219 aaKnown RBP2.78□□□□□ -1.96
PTI1YGR156W INM2Q05533 292 aa2.78□□□□□ -1.96
PTI1YGR156W CTR3Q06686 241 aa2.78□□□□□ -1.96
PTI1YGR156W DFM1Q12743 341 aaKnown RBP2.78□□□□□ -1.96
PTI1YGR156W YAL063C-AQ3E791 96 aa2.78□□□□□ -1.96
PTI1YGR156W NCB2Q92317 146 aa2.78□□□□□ -1.96
PTI1YGR156W ARG80P07249 177 aa2.77□□□□□ -1.97
PTI1YGR156W HOM6P31116 359 aaKnown RBP2.77□□□□□ -1.97
PTI1YGR156W TPS2P31688 896 aaKnown RBP2.77□□□□□ -1.97
PTI1YGR156W QRI5P32344 111 aa2.77□□□□□ -1.97
PTI1YGR156W KRE6P32486 720 aa2.77□□□□□ -1.97
PTI1YGR156W DOA4P32571 926 aa2.77□□□□□ -1.97
PTI1YGR156W YKT6P36015 200 aaKnown RBP2.77□□□□□ -1.97
PTI1YGR156W LDB7P38210 180 aa2.77□□□□□ -1.97
PTI1YGR156W HMF1P40037 129 aaKnown RBP2.77□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 69.5 ms