RNA–Protein interactions for RNA: YGR105W

VMA21, Transcript of Integral membrane protein required for V-ATPase function, yeastyeast

Gene VMA21, Length 234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA21YGR105W POF1P25576 258 aa1.49□□□□□ -2.17
VMA21YGR105W RNP1P32385 249 aa1.49□□□□□ -2.17
VMA21YGR105W TIF34P40217 347 aaKnown RBP1.49□□□□□ -2.17
VMA21YGR105W AGX1P43567 385 aa1.49□□□□□ -2.17
VMA21YGR105W YFR054CP43622 192 aa1.49□□□□□ -2.17
VMA21YGR105W RPL4BP49626 362 aaKnown RBP1.49□□□□□ -2.17
VMA21YGR105W YNL050CP53952 270 aa1.49□□□□□ -2.17
VMA21YGR105W TRM44Q02648 567 aaKnown RBP1.49□□□□□ -2.17
VMA21YGR105W YOS9Q99220 542 aa1.49□□□□□ -2.17
VMA21YGR105W YSR3P23501 404 aa1.48□□□□□ -2.17
VMA21YGR105W MEK1P24719 497 aaPredicted RBP1.48□□□□□ -2.17
VMA21YGR105W MAL32P38158 584 aa1.48□□□□□ -2.17
VMA21YGR105W YHL049CP38722 271 aa1.48□□□□□ -2.17
VMA21YGR105W TEM1P38987 245 aa1.48□□□□□ -2.17
VMA21YGR105W MAL12P53341 584 aa1.48□□□□□ -2.17
VMA21YGR105W EBS1Q03466 884 aaKnown RBP1.48□□□□□ -2.17
VMA21YGR105W EMI1Q04406 187 aa1.48□□□□□ -2.17
VMA21YGR105W BOP2Q06150 570 aa1.48□□□□□ -2.17
VMA21YGR105W PST1Q12355 444 aa1.48□□□□□ -2.17
VMA21YGR105W FKS1P38631 1876 aaKnown RBP1.48□□□□□ -2.17
VMA21YGR105W LSM4P40070 187 aaKnown RBP1.47□□□□□ -2.17
VMA21YGR105W YJL118WP47022 219 aa1.47□□□□□ -2.17
VMA21YGR105W NBP35P52920 328 aa1.47□□□□□ -2.17
VMA21YGR105W PEX12Q04370 399 aa1.47□□□□□ -2.17
VMA21YGR105W ERV41Q04651 352 aa1.47□□□□□ -2.17
VMA21YGR105W ARV1Q06541 321 aa1.47□□□□□ -2.17
VMA21YGR105W PER33Q12144 273 aa1.47□□□□□ -2.17
VMA21YGR105W DOA4P32571 926 aa1.46□□□□□ -2.18
VMA21YGR105W DRE2P36152 348 aa1.46□□□□□ -2.18
VMA21YGR105W HEK2P38199 381 aaKnown RBP RIP-Chip data1.46□□□□□ -2.18not detected
VMA21YGR105W TIM21P53220 239 aa1.46□□□□□ -2.18
VMA21YGR105W SWS2P53937 143 aa1.46□□□□□ -2.18
VMA21YGR105W SLX9P53251 210 aaPredicted RBP1.45□□□□□ -2.18
VMA21YGR105W LSB1P53281 241 aa1.45□□□□□ -2.18
VMA21YGR105W SLD7Q08457 257 aa1.45□□□□□ -2.18
VMA21YGR105W SAS5Q99314 248 aa1.45□□□□□ -2.18
VMA21YGR105W RAD3P06839 778 aa1.44□□□□□ -2.18
VMA21YGR105W SCM4P32564 187 aa1.44□□□□□ -2.18
VMA21YGR105W ECM13P38195 257 aa1.44□□□□□ -2.18
VMA21YGR105W PRM9P39551 298 aa1.44□□□□□ -2.18
VMA21YGR105W FMP33P46998 180 aa1.44□□□□□ -2.18
VMA21YGR105W SNX4P47057 423 aa1.44□□□□□ -2.18
VMA21YGR105W MNT4P53745 580 aa1.44□□□□□ -2.18
VMA21YGR105W AAH1P53909 347 aa1.44□□□□□ -2.18
VMA21YGR105W RSM10Q03201 203 aa1.44□□□□□ -2.18
VMA21YGR105W MRPL23Q12487 163 aaPredicted RBP1.44□□□□□ -2.18
VMA21YGR105W FMP16Q12497 93 aa1.44□□□□□ -2.18
VMA21YGR105W SGA1P08019 549 aa1.43□□□□□ -2.18
VMA21YGR105W POX1P13711 748 aa1.43□□□□□ -2.18
VMA21YGR105W HSM3P38348 480 aa1.43□□□□□ -2.18
VMA21YGR105W PEX10Q05568 337 aa1.43□□□□□ -2.18
VMA21YGR105W CWP1P28319 239 aa1.42□□□□□ -2.18
VMA21YGR105W MRPL40P36534 297 aa1.42□□□□□ -2.18
VMA21YGR105W CTR3Q06686 241 aa1.42□□□□□ -2.18
VMA21YGR105W YPR011CQ12251 326 aa1.42□□□□□ -2.18
VMA21YGR105W PUT1P09368 476 aa1.41□□□□□ -2.18
VMA21YGR105W YKL070WP36087 169 aa1.41□□□□□ -2.18
VMA21YGR105W SHC1P39000 512 aa1.41□□□□□ -2.18
VMA21YGR105W RPL10P41805 221 aaKnown RBP1.41□□□□□ -2.18
VMA21YGR105W MRX5P47007 382 aa1.41□□□□□ -2.18
VMA21YGR105W SPP2Q02521 185 aa1.41□□□□□ -2.18
VMA21YGR105W YLR413WQ06689 675 aa1.41□□□□□ -2.18
VMA21YGR105W MHT1Q12525 324 aa1.41□□□□□ -2.18
VMA21YGR105W STH1P32597 1359 aa1.41□□□□□ -2.18
VMA21YGR105W DBP3P20447 523 aaKnown RBP1.4□□□□□ -2.19
VMA21YGR105W AYR1P40471 297 aa1.4□□□□□ -2.19
VMA21YGR105W OST2P46964 130 aa1.4□□□□□ -2.19
VMA21YGR105W ARP5P53946 755 aa1.4□□□□□ -2.19
VMA21YGR105W BOL1Q3E793 110 aa1.4□□□□□ -2.19
VMA21YGR105W CCA1P21269 546 aa1.39□□□□□ -2.19
VMA21YGR105W RCN1P36054 211 aa1.39□□□□□ -2.19
VMA21YGR105W SME1Q12330 94 aaPredicted RBP1.39□□□□□ -2.19
VMA21YGR105W RAS2P01120 322 aaKnown RBP1.38□□□□□ -2.19
VMA21YGR105W MET16P18408 261 aaPredicted RBP1.38□□□□□ -2.19
VMA21YGR105W PRS4P38063 326 aaPredicted RBP1.38□□□□□ -2.19
VMA21YGR105W COA1P40452 197 aa1.38□□□□□ -2.19
VMA21YGR105W YGL034CP53186 121 aa1.38□□□□□ -2.19
VMA21YGR105W MAL13P53338 473 aa1.38□□□□□ -2.19
VMA21YGR105W YLR179CQ06252 201 aaKnown RBP1.38□□□□□ -2.19
VMA21YGR105W YBL008W-AQ3E821 79 aa1.38□□□□□ -2.19
VMA21YGR105W YHR032W-AP0C5N6 59 aa1.37□□□□□ -2.19
VMA21YGR105W SEC22P22214 214 aa1.37□□□□□ -2.19
VMA21YGR105W SMD3P43321 101 aaKnown RBP1.37□□□□□ -2.19
VMA21YGR105W BBP1Q12365 385 aa1.37□□□□□ -2.19
VMA21YGR105W EMP46Q12396 444 aa1.37□□□□□ -2.19
VMA21YGR105W YIL002W-AQ3E7Z5 69 aa1.37□□□□□ -2.19
VMA21YGR105W RCY1P39531 840 aa1.36□□□□□ -2.19
VMA21YGR105W YHB1P39676 399 aaKnown RBP1.36□□□□□ -2.19
VMA21YGR105W GMC2Q06201 188 aa1.36□□□□□ -2.19
VMA21YGR105W YPL119C-AQ3E751 87 aa1.36□□□□□ -2.19
VMA21YGR105W YJR012CP47087 207 aa1.35□□□□□ -2.19
VMA21YGR105W DAD3P69850 94 aa1.35□□□□□ -2.19
VMA21YGR105W PRM15Q03262 622 aa1.35□□□□□ -2.19
VMA21YGR105W OST6Q03723 332 aa1.35□□□□□ -2.19
VMA21YGR105W HIS1P00498 297 aaKnown RBP1.34□□□□□ -2.19
VMA21YGR105W SSA3P09435 649 aaKnown RBP1.34□□□□□ -2.19
VMA21YGR105W SSH1P38353 490 aaKnown RBP1.34□□□□□ -2.19
VMA21YGR105W COS8P38723 381 aa1.34□□□□□ -2.19
VMA21YGR105W PEX18P38855 283 aa1.34□□□□□ -2.19
VMA21YGR105W ASI3P53983 676 aa1.34□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 77.1 ms