RNA–Protein interactions for RNA: YER123W

YCK3, Transcript of Palmitoylated vacuolar membrane-localized casein kinase I isoform, yeastyeast

Gene YCK3, Length 1,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCK3YER123W GEP5Q12393 293 aa0.77□□□□□ -2.29
YCK3YER123W SFG1Q12507 346 aa0.77□□□□□ -2.29
YCK3YER123W RGS2Q99188 309 aa0.77□□□□□ -2.29
YCK3YER123W POL30P15873 258 aaKnown RBP0.76□□□□□ -2.29
YCK3YER123W VPS1P21576 704 aaKnown RBP0.76□□□□□ -2.29
YCK3YER123W MEI5P32489 222 aa0.76□□□□□ -2.29
YCK3YER123W CLB6P32943 380 aa0.76□□□□□ -2.29
YCK3YER123W MYO3P36006 1272 aa0.76□□□□□ -2.29
YCK3YER123W YSW1P38280 609 aa0.76□□□□□ -2.29
YCK3YER123W YHL044WP38727 235 aa0.76□□□□□ -2.29
YCK3YER123W YDR089WP38966 869 aa0.76□□□□□ -2.29
YCK3YER123W RPC17P47076 161 aa0.76□□□□□ -2.29
YCK3YER123W TRM9P49957 279 aa0.76□□□□□ -2.29
YCK3YER123W EMC4P53073 190 aa0.76□□□□□ -2.29
YCK3YER123W COG7P53195 279 aa0.76□□□□□ -2.29
YCK3YER123W SSU72P53538 206 aaPredicted RBP0.76□□□□□ -2.29
YCK3YER123W YNR066CP53752 436 aa0.76□□□□□ -2.29
YCK3YER123W YNL146WP53906 100 aa0.76□□□□□ -2.29
YCK3YER123W UTP6Q02354 440 aaKnown RBP0.76□□□□□ -2.29
YCK3YER123W EGD1Q02642 157 aaKnown RBP0.76□□□□□ -2.29
YCK3YER123W RDL2Q08742 149 aaKnown RBP0.76□□□□□ -2.29
YCK3YER123W VIK1Q12045 647 aa0.76□□□□□ -2.29
YCK3YER123W PFK27Q12471 397 aaPredicted RBP0.76□□□□□ -2.29
YCK3YER123W RBK1P25332 333 aa0.75□□□□□ -2.29
YCK3YER123W RDS1P25611 832 aa0.75□□□□□ -2.29
YCK3YER123W SGE1P33335 543 aa0.75□□□□□ -2.29
YCK3YER123W AIM29P36154 155 aa0.75□□□□□ -2.29
YCK3YER123W RCY1P39531 840 aa0.75□□□□□ -2.29
YCK3YER123W DSK2P48510 373 aa0.75□□□□□ -2.29
YCK3YER123W CGI121Q03705 181 aaKnown RBP0.75□□□□□ -2.29
YCK3YER123W SEC13Q04491 297 aaKnown RBP0.75□□□□□ -2.29
YCK3YER123W GPM2Q12008 311 aa0.75□□□□□ -2.29
YCK3YER123W AKR2Q12013 749 aa0.75□□□□□ -2.29
YCK3YER123W FRE6Q12473 712 aa0.75□□□□□ -2.29
YCK3YER123W NBL1Q3E7Y6 73 aa0.75□□□□□ -2.29
YCK3YER123W ADH3P07246 375 aaKnown RBP0.74□□□□□ -2.29
YCK3YER123W PHO80P20052 293 aa0.74□□□□□ -2.29
YCK3YER123W SCL1P21243 252 aaKnown RBP0.74□□□□□ -2.29
YCK3YER123W HXT2P23585 541 aa0.74□□□□□ -2.29
YCK3YER123W VMA5P31412 392 aaKnown RBP0.74□□□□□ -2.29
YCK3YER123W PUP2P32379 260 aa0.74□□□□□ -2.29
YCK3YER123W YEL043WP32618 956 aa0.74□□□□□ -2.29
YCK3YER123W PET8P38921 284 aa0.74□□□□□ -2.29
YCK3YER123W FIS1P40515 155 aa0.74□□□□□ -2.29
YCK3YER123W RSM27P53305 110 aa0.74□□□□□ -2.29
YCK3YER123W ARC18Q05933 178 aaKnown RBP0.74□□□□□ -2.29
YCK3YER123W YLR030WQ07967 263 aa0.74□□□□□ -2.29
YCK3YER123W ERD1P16151 362 aa0.74□□□□□ -2.29
YCK3YER123W RRT12P25381 491 aa0.74□□□□□ -2.29
YCK3YER123W MRPL6P32904 214 aa0.74□□□□□ -2.29
YCK3YER123W LAS1P36146 502 aaPredicted RBP0.74□□□□□ -2.29
YCK3YER123W ALP1P38971 573 aa0.74□□□□□ -2.29
YCK3YER123W PRP39P39682 629 aaKnown RBP0.74□□□□□ -2.29
YCK3YER123W AGE2P40529 298 aa0.74□□□□□ -2.29
YCK3YER123W YIL012WP40551 113 aa0.74□□□□□ -2.29
YCK3YER123W MIG2P53035 382 aa0.74□□□□□ -2.29
YCK3YER123W YGL114WP53134 725 aa0.74□□□□□ -2.29
YCK3YER123W CUE3P53137 624 aaKnown RBP0.74□□□□□ -2.29
YCK3YER123W PXR1P53335 271 aaPredicted RBP0.74□□□□□ -2.29
YCK3YER123W ALG9P53868 555 aaKnown RBP0.74□□□□□ -2.29
YCK3YER123W OSH6Q02201 448 aa0.74□□□□□ -2.29
YCK3YER123W VPS71Q03433 280 aa0.74□□□□□ -2.29
YCK3YER123W YDR209CQ03480 137 aa0.74□□□□□ -2.29
YCK3YER123W BUR2Q05949 395 aa0.74□□□□□ -2.29
YCK3YER123W YLR012CQ07927 99 aa0.74□□□□□ -2.29
YCK3YER123W YOR292CQ08743 309 aa0.74□□□□□ -2.29
YCK3YER123W VPS68Q12016 184 aa0.74□□□□□ -2.29
YCK3YER123W TPO4Q12256 659 aa0.74□□□□□ -2.29
YCK3YER123W PRR2Q12310 699 aa0.74□□□□□ -2.29
YCK3YER123W SKS1Q12505 502 aa0.74□□□□□ -2.29
YCK3YER123W STE3P06783 470 aa0.73□□□□□ -2.29
YCK3YER123W ZWF1P11412 505 aaKnown RBP0.73□□□□□ -2.29
YCK3YER123W TAL1P15019 335 aaKnown RBP0.73□□□□□ -2.29
YCK3YER123W ACB1P31787 87 aa0.73□□□□□ -2.29
YCK3YER123W CDC13P32797 924 aaKnown RBP0.73□□□□□ -2.29
YCK3YER123W BLI1P35727 113 aa0.73□□□□□ -2.29
YCK3YER123W NRG2P38082 220 aa0.73□□□□□ -2.29
YCK3YER123W SHQ1P40486 507 aaPredicted RBP0.73□□□□□ -2.29
YCK3YER123W PIR5P46999 287 aa0.73□□□□□ -2.29
YCK3YER123W TAF6P53040 516 aa0.73□□□□□ -2.29
YCK3YER123W YNL143CP53908 130 aa0.73□□□□□ -2.29
YCK3YER123W GRX8Q05926 109 aa0.73□□□□□ -2.29
YCK3YER123W RDS3Q06835 107 aaPredicted RBP0.73□□□□□ -2.29
YCK3YER123W YAL063C-AQ3E791 96 aa0.73□□□□□ -2.29
YCK3YER123W ILV1P00927 576 aaKnown RBP0.72□□□□□ -2.29
YCK3YER123W RPL26AP05743 127 aaKnown RBP0.72□□□□□ -2.29
YCK3YER123W HIS3P06633 220 aa0.72□□□□□ -2.29
YCK3YER123W SCO1P23833 295 aa0.72□□□□□ -2.29
YCK3YER123W GPX1P36014 167 aa0.72□□□□□ -2.29
YCK3YER123W YRA2P36036 203 aaKnown RBP RIP-Chip data0.72□□□□□ -2.29not detected
YCK3YER123W MRPL15P36523 253 aa0.72□□□□□ -2.29
YCK3YER123W ECM13P38195 257 aa0.72□□□□□ -2.29
YCK3YER123W YIL086CP40503 102 aa0.72□□□□□ -2.29
YCK3YER123W YJR141WP47172 347 aaPredicted RBP0.72□□□□□ -2.29
YCK3YER123W DAN1P47178 298 aa0.72□□□□□ -2.29
YCK3YER123W RPL26BP53221 127 aaKnown RBP0.72□□□□□ -2.29
YCK3YER123W YMR166CQ03829 368 aa0.72□□□□□ -2.29
YCK3YER123W RVB1Q03940 463 aaKnown RBP0.72□□□□□ -2.29
YCK3YER123W MYO5Q04439 1219 aaKnown RBP0.72□□□□□ -2.29
YCK3YER123W MDM32Q12171 622 aa0.72□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 92.9 ms