RNA–Protein interactions for RNA: YER094C

PUP3, Transcript of Beta 3 subunit of the 20S proteasome, yeastyeast

Gene PUP3, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP3YER094C PUG1P40100 303 aa6.86□□□□□ -1.31
PUP3YER094C ERJ5P43613 295 aaPredicted RBP6.86□□□□□ -1.31
PUP3YER094C SCY1P53009 804 aa6.86□□□□□ -1.31
PUP3YER094C YNL165WP53891 406 aa6.86□□□□□ -1.31
PUP3YER094C RAF1Q06891 181 aa6.86□□□□□ -1.31
PUP3YER094C INP53Q12271 1107 aa6.86□□□□□ -1.31
PUP3YER094C CYC1P00044 109 aaPredicted RBP6.85□□□□□ -1.31
PUP3YER094C GCD1P09032 578 aaPredicted RBP6.85□□□□□ -1.31
PUP3YER094C AFG1P32317 509 aa6.85□□□□□ -1.31
PUP3YER094C YHR122WP38829 231 aa6.85□□□□□ -1.31
PUP3YER094C XBP1P40489 647 aa6.85□□□□□ -1.31
PUP3YER094C YKE4P40544 346 aa6.85□□□□□ -1.31
PUP3YER094C CAT5P41735 233 aa6.85□□□□□ -1.31
PUP3YER094C CTK2P46962 323 aa6.85□□□□□ -1.31
PUP3YER094C UBX6P47049 396 aa6.85□□□□□ -1.31
PUP3YER094C POP6P53218 158 aa6.85□□□□□ -1.31
PUP3YER094C SCW4P53334 386 aaKnown RBP6.85□□□□□ -1.31
PUP3YER094C YAP6Q03935 383 aa6.85□□□□□ -1.31
PUP3YER094C YLR283WQ05867 314 aa6.85□□□□□ -1.31
PUP3YER094C HEM25Q07534 307 aa6.85□□□□□ -1.31
PUP3YER094C THI72Q08579 599 aa6.85□□□□□ -1.31
PUP3YER094C IZH2Q12442 317 aa6.85□□□□□ -1.31
PUP3YER094C PRP8P33334 2413 aaKnown RBP6.85□□□□□ -1.31
PUP3YER094C COX5BP00425 151 aa6.84□□□□□ -1.31
PUP3YER094C IPP1P00817 287 aaKnown RBP6.84□□□□□ -1.31
PUP3YER094C FUR4P05316 633 aaKnown RBP6.84□□□□□ -1.31
PUP3YER094C HXT2P23585 541 aa6.84□□□□□ -1.31
PUP3YER094C APL3P38065 1025 aa6.84□□□□□ -1.31
PUP3YER094C MTC6P38849 526 aa6.84□□□□□ -1.31
PUP3YER094C ATF1P40353 525 aa6.84□□□□□ -1.31
PUP3YER094C IDP2P41939 412 aa6.84□□□□□ -1.31
PUP3YER094C NIT3P49954 291 aa6.84□□□□□ -1.31
PUP3YER094C TNA1P53322 534 aa6.84□□□□□ -1.31
PUP3YER094C PHO92Q06390 306 aa6.84□□□□□ -1.31
PUP3YER094C TGS1Q12052 315 aa6.84□□□□□ -1.31
PUP3YER094C COX17Q12287 69 aa6.84□□□□□ -1.31
PUP3YER094C HTZ1Q12692 134 aaKnown RBP6.84□□□□□ -1.31
PUP3YER094C HEM4P06174 275 aa6.83□□□□□ -1.32
PUP3YER094C DSF1P0CX08 502 aa6.83□□□□□ -1.32
PUP3YER094C YNR073CP0CX09 502 aa6.83□□□□□ -1.32
PUP3YER094C PET54P10834 293 aa6.83□□□□□ -1.32
PUP3YER094C BUD23P25627 275 aaPredicted RBP6.83□□□□□ -1.32
PUP3YER094C RNP1P32385 249 aa6.83□□□□□ -1.32
PUP3YER094C TAT1P38085 619 aa6.83□□□□□ -1.32
PUP3YER094C YBR242WP38331 238 aa6.83□□□□□ -1.32
PUP3YER094C YMR262WP38430 313 aa6.83□□□□□ -1.32
PUP3YER094C GPP1P41277 250 aaKnown RBP6.83□□□□□ -1.32
PUP3YER094C SYS1P41544 203 aa6.83□□□□□ -1.32
PUP3YER094C CIN2P46670 268 aa6.83□□□□□ -1.32
PUP3YER094C GPI14P47088 403 aaKnown RBP6.83□□□□□ -1.32
PUP3YER094C AIM25P47140 327 aa6.83□□□□□ -1.32
PUP3YER094C ACS2P52910 683 aaKnown RBP6.83□□□□□ -1.32
PUP3YER094C YGR042WP53227 271 aa6.83□□□□□ -1.32
PUP3YER094C YNR048WP53740 393 aa6.83□□□□□ -1.32
PUP3YER094C BUD25P85052 153 aa6.83□□□□□ -1.32
PUP3YER094C MRPL13Q02204 264 aa6.83□□□□□ -1.32
PUP3YER094C RCE1Q03530 315 aa6.83□□□□□ -1.32
PUP3YER094C KEI1Q06346 221 aa6.83□□□□□ -1.32
PUP3YER094C FRE3Q08905 711 aa6.83□□□□□ -1.32
PUP3YER094C SRL2Q12020 392 aa6.83□□□□□ -1.32
PUP3YER094C PRS5Q12265 496 aaKnown RBP6.83□□□□□ -1.32
PUP3YER094C FOL3Q12676 427 aaPredicted RBP6.83□□□□□ -1.32
PUP3YER094C ODC2Q99297 307 aa6.83□□□□□ -1.32
PUP3YER094C TDH3P00359 332 aaKnown RBP RIP-Chip data6.82□□□□□ -1.32not detected
PUP3YER094C MCM1P11746 286 aa6.82□□□□□ -1.32
PUP3YER094C CDC34P14682 295 aa6.82□□□□□ -1.32
PUP3YER094C GCN3P14741 305 aa6.82□□□□□ -1.32
PUP3YER094C YBL010CP32788 280 aa6.82□□□□□ -1.32
PUP3YER094C MRPS5P33759 307 aa6.82□□□□□ -1.32
PUP3YER094C CLG1P35190 452 aa6.82□□□□□ -1.32
PUP3YER094C MOB2P43563 287 aa6.82□□□□□ -1.32
PUP3YER094C BXI1P48558 297 aa6.82□□□□□ -1.32
PUP3YER094C MTL1P53214 551 aa6.82□□□□□ -1.32
PUP3YER094C FMP48P53233 369 aa6.82□□□□□ -1.32
PUP3YER094C GIM3P53900 129 aa6.82□□□□□ -1.32
PUP3YER094C RNH201P53942 307 aa6.82□□□□□ -1.32
PUP3YER094C RPL6AQ02326 176 aaKnown RBP6.82□□□□□ -1.32
PUP3YER094C YLR031WQ07978 186 aa6.82□□□□□ -1.32
PUP3YER094C SCM3Q12334 223 aa6.82□□□□□ -1.32
PUP3YER094C ISA2Q12425 185 aa6.82□□□□□ -1.32
PUP3YER094C SPS2P08459 502 aa6.81□□□□□ -1.32
PUP3YER094C RPL35AP0CX84 120 aaKnown RBP6.81□□□□□ -1.32
PUP3YER094C RPL35BP0CX85 120 aaKnown RBP6.81□□□□□ -1.32
PUP3YER094C RPL30P14120 105 aaKnown RBP6.81□□□□□ -1.32
PUP3YER094C PET18P25362 215 aa6.81□□□□□ -1.32
PUP3YER094C MTC7P32633 139 aa6.81□□□□□ -1.32
PUP3YER094C PPG1P32838 368 aa6.81□□□□□ -1.32
PUP3YER094C UMP1P38293 148 aa6.81□□□□□ -1.32
PUP3YER094C YER084WP40057 128 aa6.81□□□□□ -1.32
PUP3YER094C AVT7P40501 490 aa6.81□□□□□ -1.32
PUP3YER094C BUD8P41698 603 aa6.81□□□□□ -1.32
PUP3YER094C AVT4P50944 713 aa6.81□□□□□ -1.32
PUP3YER094C YGL159WP53110 370 aa6.81□□□□□ -1.32
PUP3YER094C ALG12P53730 551 aa6.81□□□□□ -1.32
PUP3YER094C TY1A-MR1Q04215 440 aa6.81□□□□□ -1.32
PUP3YER094C UTP15Q04305 513 aaKnown RBP6.81□□□□□ -1.32
PUP3YER094C HNT1Q04344 158 aaKnown RBP6.81□□□□□ -1.32
PUP3YER094C YBR056W-AI2HB52 66 aa6.8□□□□□ -1.32
PUP3YER094C YLR358CO13565 187 aa6.8□□□□□ -1.32
PUP3YER094C CHO1P08456 276 aa6.8□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 65.6 ms