RNA–Protein interactions for RNA: YER011W

TIR1, Transcript of Cell wall mannoprotein, yeast

Gene TIR1, Length 765 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIR1	YER011W	RPS18B	P0CX56	146 aa	Predicted RBP	11.75	□□□□□ -0.53
TIR1	YER011W	MATALPHA1	P0CY06	175 aa		11.75	□□□□□ -0.53
TIR1	YER011W	HMLALPHA1	P0CY07	175 aa		11.75	□□□□□ -0.53
TIR1	YER011W	ERG24	P32462	438 aa	Known RBP	11.75	□□□□□ -0.53
TIR1	YER011W	MRT4	P33201	236 aa	Known RBP	11.75	□□□□□ -0.53
TIR1	YER011W	TMA19	P35691	167 aa	Known RBP	11.75	□□□□□ -0.53
TIR1	YER011W	RCN1	P36054	211 aa		11.75	□□□□□ -0.53
TIR1	YER011W	ATG18	P43601	500 aa		11.75	□□□□□ -0.53
TIR1	YER011W	YIP4	P53093	235 aa		11.75	□□□□□ -0.53
TIR1	YER011W	CIK1	Q01649	594 aa		11.75	□□□□□ -0.53
TIR1	YER011W	YDR391C	Q04170	232 aa		11.75	□□□□□ -0.53
TIR1	YER011W	PEX27	Q08580	376 aa		11.75	□□□□□ -0.53
TIR1	YER011W	CLB6	P32943	380 aa		11.74	□□□□□ -0.53
TIR1	YER011W	ZRT3	P34240	503 aa		11.74	□□□□□ -0.53
TIR1	YER011W	PIG2	P40187	538 aa		11.74	□□□□□ -0.53
TIR1	YER011W	ERJ5	P43613	295 aa	Predicted RBP	11.74	□□□□□ -0.53
TIR1	YER011W	POP6	P53218	158 aa		11.74	□□□□□ -0.53
TIR1	YER011W	HHT1	P61830	136 aa		11.74	□□□□□ -0.53
TIR1	YER011W	SOG2	Q08817	791 aa		11.74	□□□□□ -0.53
TIR1	YER011W	MSH5	Q12175	901 aa		11.74	□□□□□ -0.53
TIR1	YER011W	RNH203	Q12338	110 aa		11.74	□□□□□ -0.53
TIR1	YER011W	PHO4	P07270	312 aa	Known RBP	11.73	□□□□□ -0.53
TIR1	YER011W	CDC39	P25655	2108 aa	Known RBP	11.73	□□□□□ -0.53
TIR1	YER011W	YBR220C	P38318	560 aa		11.73	□□□□□ -0.53
TIR1	YER011W	YNR048W	P53740	393 aa		11.73	□□□□□ -0.53
TIR1	YER011W	MRPL35	Q06678	367 aa		11.73	□□□□□ -0.53
TIR1	YER011W	NGL1	Q08213	363 aa	Known RBP	11.73	□□□□□ -0.53
TIR1	YER011W	ORT1	Q12375	292 aa		11.73	□□□□□ -0.53
TIR1	YER011W	SPS100	P13130	326 aa		11.72	□□□□□ -0.53
TIR1	YER011W	ATF1	P40353	525 aa		11.72	□□□□□ -0.53
TIR1	YER011W	YIP5	P53108	310 aa		11.72	□□□□□ -0.53
TIR1	YER011W	HEM25	Q07534	307 aa		11.72	□□□□□ -0.53
TIR1	YER011W	ATG41	Q12048	136 aa		11.72	□□□□□ -0.53
TIR1	YER011W	RPN13	O13563	156 aa		11.71	□□□□□ -0.53
TIR1	YER011W	HOM6	P31116	359 aa	Known RBP	11.71	□□□□□ -0.53
TIR1	YER011W	SNC2	P33328	115 aa		11.71	□□□□□ -0.53
TIR1	YER011W	MTR2	P34232	184 aa	Known RBP	11.71	□□□□□ -0.53
TIR1	YER011W	PRS3	P38689	320 aa	Known RBP	11.71	□□□□□ -0.53
TIR1	YER011W	CIN2	P46670	268 aa		11.71	□□□□□ -0.53
TIR1	YER011W	MTL1	P53214	551 aa		11.71	□□□□□ -0.53
TIR1	YER011W	YPL077C	Q02831	240 aa		11.71	□□□□□ -0.53
TIR1	YER011W	SGA1	P08019	549 aa		11.7	□□□□□ -0.54
TIR1	YER011W	RPL30	P14120	105 aa	Known RBP	11.7	□□□□□ -0.54
TIR1	YER011W	CNE1	P27825	502 aa		11.7	□□□□□ -0.54
TIR1	YER011W	AFG1	P32317	509 aa		11.7	□□□□□ -0.54
TIR1	YER011W	MBA1	P38300	278 aa		11.7	□□□□□ -0.54
TIR1	YER011W	YHK8	P38776	514 aa		11.7	□□□□□ -0.54
TIR1	YER011W	FLX1	P40464	311 aa		11.7	□□□□□ -0.54
TIR1	YER011W	BNA6	P43619	295 aa		11.7	□□□□□ -0.54
TIR1	YER011W	PHB2	P50085	310 aa		11.7	□□□□□ -0.54
TIR1	YER011W	UBC13	P52490	153 aa		11.7	□□□□□ -0.54
TIR1	YER011W	RAI1	P53063	387 aa	Known RBP	11.7	□□□□□ -0.54
TIR1	YER011W	YGL159W	P53110	370 aa		11.7	□□□□□ -0.54
TIR1	YER011W	GPI17	Q04080	534 aa		11.7	□□□□□ -0.54
TIR1	YER011W	RSC58	Q07979	502 aa		11.7	□□□□□ -0.54
TIR1	YER011W	USB1	Q12208	290 aa	Known RBP	11.7	□□□□□ -0.54
TIR1	YER011W	YBL113C	Q7M4S9	792 aa		11.7	□□□□□ -0.54
TIR1	YER011W	CWC23	P52868	283 aa	Predicted RBP	11.69	□□□□□ -0.54
TIR1	YER011W	SCW4	P53334	386 aa	Known RBP	11.69	□□□□□ -0.54
TIR1	YER011W	RRS1	Q08746	203 aa	Known RBP	11.69	□□□□□ -0.54
TIR1	YER011W	ARO3	P14843	370 aa	Known RBP	11.68	□□□□□ -0.54
TIR1	YER011W	DEG1	P31115	442 aa	Known RBP	11.68	□□□□□ -0.54
TIR1	YER011W	GLC7	P32598	312 aa	Known RBP	11.68	□□□□□ -0.54
TIR1	YER011W	PPZ2	P33329	710 aa		11.68	□□□□□ -0.54
TIR1	YER011W	MCH2	P36032	473 aa		11.68	□□□□□ -0.54
TIR1	YER011W	FCY21	P40039	528 aa		11.68	□□□□□ -0.54
TIR1	YER011W	SER2	P42941	309 aa		11.68	□□□□□ -0.54
TIR1	YER011W	MRH4	P53166	561 aa		11.68	□□□□□ -0.54
TIR1	YER011W	RNH201	P53942	307 aa		11.68	□□□□□ -0.54
TIR1	YER011W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	11.68	□□□□□ -0.54	not detected
TIR1	YER011W	YMR130W	Q04223	302 aa		11.68	□□□□□ -0.54
TIR1	YER011W	MET3	P08536	511 aa		11.67	□□□□□ -0.54
TIR1	YER011W	PDA1	P16387	420 aa	Known RBP	11.67	□□□□□ -0.54
TIR1	YER011W	TCM62	P38228	572 aa	Known RBP	11.67	□□□□□ -0.54
TIR1	YER011W	MSS4	P38994	779 aa		11.67	□□□□□ -0.54
TIR1	YER011W	OST1	P41543	476 aa	Known RBP	11.67	□□□□□ -0.54
TIR1	YER011W	BUD8	P41698	603 aa		11.67	□□□□□ -0.54
TIR1	YER011W	AVT4	P50944	713 aa		11.67	□□□□□ -0.54
TIR1	YER011W	ERV29	P53337	310 aa		11.67	□□□□□ -0.54
TIR1	YER011W	CRZ1	P53968	678 aa		11.67	□□□□□ -0.54
TIR1	YER011W	YLR358C	O13565	187 aa		11.66	□□□□□ -0.54
TIR1	YER011W	FUR4	P05316	633 aa	Known RBP	11.66	□□□□□ -0.54
TIR1	YER011W	PRE4	P30657	266 aa		11.66	□□□□□ -0.54
TIR1	YER011W	ARO9	P38840	513 aa	Predicted RBP	11.66	□□□□□ -0.54
TIR1	YER011W	SMB1	P40018	196 aa	Known RBP	11.66	□□□□□ -0.54
TIR1	YER011W	YIL029C	P40538	142 aa		11.66	□□□□□ -0.54
TIR1	YER011W	RGC1	Q06108	1083 aa	Known RBP	11.66	□□□□□ -0.54
TIR1	YER011W	YPR196W	Q06595	470 aa		11.66	□□□□□ -0.54
TIR1	YER011W	REC114	P32841	428 aa		11.65	□□□□□ -0.54
TIR1	YER011W	IPI1	P38803	334 aa	Predicted RBP	11.65	□□□□□ -0.54
TIR1	YER011W	MIT1	P40002	666 aa		11.65	□□□□□ -0.54
TIR1	YER011W	SKO1	Q02100	647 aa		11.65	□□□□□ -0.54
TIR1	YER011W	CTF19	Q02732	369 aa		11.65	□□□□□ -0.54
TIR1	YER011W	RFU1	Q08003	200 aa		11.65	□□□□□ -0.54
TIR1	YER011W	SRL2	Q12020	392 aa		11.65	□□□□□ -0.54
TIR1	YER011W	YOR283W	Q12040	230 aa	Known RBP	11.65	□□□□□ -0.54
TIR1	YER011W	NCE102	Q12207	173 aa	RIP-Chip data	11.65	□□□□□ -0.54	not detected
TIR1	YER011W	MSI1	P13712	422 aa		11.64	□□□□□ -0.55
TIR1	YER011W	PET18	P25362	215 aa		11.64	□□□□□ -0.55
TIR1	YER011W	DBF20	P32328	564 aa		11.64	□□□□□ -0.55

Retrieved 100 of 5,963 RNA–protein pairs in 92.8 ms