RNA–Protein interactions for RNA: YDR261W-B

YDR261W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YDR261W-B, Length 5,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR261W-BYDR261W-B YJR054WP47114 497 aa2.42□□□□□ -2.02
YDR261W-BYDR261W-B PRP24P49960 444 aaKnown RBP2.42□□□□□ -2.02
YDR261W-BYDR261W-B RPN8Q08723 338 aaKnown RBP2.42□□□□□ -2.02
YDR261W-BYDR261W-B EAF3Q12432 401 aa2.42□□□□□ -2.02
YDR261W-BYDR261W-B MRX4Q12467 430 aa2.42□□□□□ -2.02
YDR261W-BYDR261W-B YER078W-AQ3E7A2 54 aa2.42□□□□□ -2.02
YDR261W-BYDR261W-B PPH21P23594 369 aa2.41□□□□□ -2.02
YDR261W-BYDR261W-B ALK2P32789 676 aaPredicted RBP2.41□□□□□ -2.02
YDR261W-BYDR261W-B ECM13P38195 257 aa2.41□□□□□ -2.02
YDR261W-BYDR261W-B SSU72P53538 206 aaPredicted RBP2.41□□□□□ -2.02
YDR261W-BYDR261W-B FMP41P53889 259 aaKnown RBP2.41□□□□□ -2.02
YDR261W-BYDR261W-B GGA1Q06336 557 aa2.41□□□□□ -2.02
YDR261W-BYDR261W-B YDR018CQ12185 396 aa2.41□□□□□ -2.02
YDR261W-BYDR261W-B PRM5P40476 318 aa2.41□□□□□ -2.02
YDR261W-BYDR261W-B ATG18P43601 500 aa2.41□□□□□ -2.02
YDR261W-BYDR261W-B MIG2P53035 382 aa2.41□□□□□ -2.02
YDR261W-BYDR261W-B YNL046WP53956 172 aa2.41□□□□□ -2.02
YDR261W-BYDR261W-B PRM15Q03262 622 aa2.41□□□□□ -2.02
YDR261W-BYDR261W-B YMR279CQ03263 540 aa2.41□□□□□ -2.02
YDR261W-BYDR261W-B RRP42Q12277 265 aaPredicted RBP2.41□□□□□ -2.02
YDR261W-BYDR261W-B YAL063C-AQ3E791 96 aa2.41□□□□□ -2.02
YDR261W-BYDR261W-B STE7P06784 515 aa2.41□□□□□ -2.02
YDR261W-BYDR261W-B CLG1P35190 452 aa2.41□□□□□ -2.02
YDR261W-BYDR261W-B BRR6P53062 197 aa2.41□□□□□ -2.02
YDR261W-BYDR261W-B PDR17P53844 350 aa2.41□□□□□ -2.02
YDR261W-BYDR261W-B PUT1P09368 476 aa2.41□□□□□ -2.02
YDR261W-BYDR261W-B GCY1P14065 312 aaKnown RBP RIP-Chip data2.41□□□□□ -2.02not detected
YDR261W-BYDR261W-B ARC40P38328 384 aaKnown RBP2.41□□□□□ -2.02
YDR261W-BYDR261W-B SDS23P53172 527 aa2.41□□□□□ -2.02
YDR261W-BYDR261W-B WSC2P53832 503 aa2.41□□□□□ -2.02
YDR261W-BYDR261W-B ADD37Q03233 198 aa2.41□□□□□ -2.02
YDR261W-BYDR261W-B ILV6P25605 309 aaKnown RBP2.4□□□□□ -2.02
YDR261W-BYDR261W-B HEK2P38199 381 aaKnown RBP RIP-Chip data2.4□□□□□ -2.02not detected
YDR261W-BYDR261W-B MDV1P47025 714 aa2.4□□□□□ -2.02
YDR261W-BYDR261W-B MMS2P53152 137 aa2.4□□□□□ -2.02
YDR261W-BYDR261W-B SPG4Q04438 115 aa2.4□□□□□ -2.02
YDR261W-BYDR261W-B YMR315WQ04869 349 aaKnown RBP2.4□□□□□ -2.02
YDR261W-BYDR261W-B AGC1Q12482 902 aa2.4□□□□□ -2.02
YDR261W-BYDR261W-B RPL28P02406 149 aaKnown RBP2.4□□□□□ -2.02
YDR261W-BYDR261W-B RPL4AP10664 362 aaKnown RBP2.4□□□□□ -2.02
YDR261W-BYDR261W-B MSI1P13712 422 aa2.4□□□□□ -2.02
YDR261W-BYDR261W-B YCR043CP25361 127 aa2.4□□□□□ -2.02
YDR261W-BYDR261W-B MRPL28P36527 147 aa2.4□□□□□ -2.02
YDR261W-BYDR261W-B ICE2P40499 491 aa2.4□□□□□ -2.02
YDR261W-BYDR261W-B RPL4BP49626 362 aaKnown RBP2.4□□□□□ -2.02
YDR261W-BYDR261W-B CRZ1P53968 678 aa2.4□□□□□ -2.02
YDR261W-BYDR261W-B YDR415CQ04033 374 aaPredicted RBP2.4□□□□□ -2.02
YDR261W-BYDR261W-B RIF2Q06208 395 aa2.4□□□□□ -2.02
YDR261W-BYDR261W-B SEC4P07560 215 aaKnown RBP2.4□□□□□ -2.03
YDR261W-BYDR261W-B DBF2P22204 572 aa2.4□□□□□ -2.03
YDR261W-BYDR261W-B SCO2P38072 301 aa2.4□□□□□ -2.03
YDR261W-BYDR261W-B SHE1P38200 338 aa2.4□□□□□ -2.03
YDR261W-BYDR261W-B YJL213WP40896 331 aa2.4□□□□□ -2.03
YDR261W-BYDR261W-B NCA3P46955 337 aa2.4□□□□□ -2.03
YDR261W-BYDR261W-B RRS1Q08746 203 aaKnown RBP2.4□□□□□ -2.03
YDR261W-BYDR261W-B TRM5P38793 499 aa2.4□□□□□ -2.03
YDR261W-BYDR261W-B YDL144CQ07589 356 aa2.4□□□□□ -2.03
YDR261W-BYDR261W-B YPL150WQ12152 901 aa2.4□□□□□ -2.03
YDR261W-BYDR261W-B LSO2Q3E772 92 aaKnown RBP2.4□□□□□ -2.03
YDR261W-BYDR261W-B TY1B-DR3Q99231 1755 aa2.4□□□□□ -2.03
YDR261W-BYDR261W-B RPB5P20434 215 aa2.39□□□□□ -2.03
YDR261W-BYDR261W-B CSE2P33308 149 aa2.39□□□□□ -2.03
YDR261W-BYDR261W-B MRPL3P36516 390 aa2.39□□□□□ -2.03
YDR261W-BYDR261W-B AVT7P40501 490 aa2.39□□□□□ -2.03
YDR261W-BYDR261W-B YIL067CP40514 678 aa2.39□□□□□ -2.03
YDR261W-BYDR261W-B TY1B-BRQ12193 1756 aa2.39□□□□□ -2.03
YDR261W-BYDR261W-B TY1B-GR3Q12316 1755 aa2.39□□□□□ -2.03
YDR261W-BYDR261W-B TY1B-ORQ92393 1755 aa2.39□□□□□ -2.03
YDR261W-BYDR261W-B CPR1P14832 162 aaKnown RBP2.39□□□□□ -2.03
YDR261W-BYDR261W-B FIG1P38224 298 aa2.39□□□□□ -2.03
YDR261W-BYDR261W-B FZO1P38297 855 aa2.39□□□□□ -2.03
YDR261W-BYDR261W-B WSC4P38739 605 aa2.39□□□□□ -2.03
YDR261W-BYDR261W-B YPL113CQ02961 396 aa2.39□□□□□ -2.03
YDR261W-BYDR261W-B ARO7P32178 256 aa2.39□□□□□ -2.03
YDR261W-BYDR261W-B DXO1Q06349 442 aa2.39□□□□□ -2.03
YDR261W-BYDR261W-B NOC4Q06512 552 aaPredicted RBP2.39□□□□□ -2.03
YDR261W-BYDR261W-B YOR186WQ08560 144 aa2.39□□□□□ -2.03
YDR261W-BYDR261W-B ERV2Q12284 196 aa2.39□□□□□ -2.03
YDR261W-BYDR261W-B SNU23Q12368 194 aaPredicted RBP2.39□□□□□ -2.03
YDR261W-BYDR261W-B CPR4P25334 318 aa2.39□□□□□ -2.03
YDR261W-BYDR261W-B TRR1P29509 319 aaKnown RBP2.39□□□□□ -2.03
YDR261W-BYDR261W-B YPL245WQ12179 454 aaKnown RBP2.39□□□□□ -2.03
YDR261W-BYDR261W-B YCL021W-AQ96VH3 125 aa2.39□□□□□ -2.03
YDR261W-BYDR261W-B TY2B-LR1P0C2J3 1770 aa2.39□□□□□ -2.03
YDR261W-BYDR261W-B TY2B-FP0CX63 1770 aa2.39□□□□□ -2.03
YDR261W-BYDR261W-B TY2B-GR2P0CX64 1770 aa2.39□□□□□ -2.03
YDR261W-BYDR261W-B TY2B-CP25384 1770 aa2.39□□□□□ -2.03
YDR261W-BYDR261W-B TY2B-DR2Q03494 1770 aa2.39□□□□□ -2.03
YDR261W-BYDR261W-B TY1B-DR1Q03855 1755 aa2.39□□□□□ -2.03
YDR261W-BYDR261W-B TY2B-DR3Q07791 1770 aaKnown RBP2.39□□□□□ -2.03
YDR261W-BYDR261W-B TY2B-OR1Q12113 1770 aa2.39□□□□□ -2.03
YDR261W-BYDR261W-B TY2B-DR1Q12472 1770 aa2.39□□□□□ -2.03
YDR261W-BYDR261W-B TY2B-OR2Q12501 1770 aa2.39□□□□□ -2.03
YDR261W-BYDR261W-B OAC1P32332 324 aa2.38□□□□□ -2.03
YDR261W-BYDR261W-B RRP3P38712 501 aaKnown RBP2.38□□□□□ -2.03
YDR261W-BYDR261W-B YHR127WP38833 243 aaKnown RBP2.38□□□□□ -2.03
YDR261W-BYDR261W-B SRP14P38985 146 aa2.38□□□□□ -2.03
YDR261W-BYDR261W-B PEX17P40155 199 aa2.38□□□□□ -2.03
YDR261W-BYDR261W-B UBC12P52491 188 aa2.38□□□□□ -2.03
YDR261W-BYDR261W-B YGR015CP53208 328 aa2.38□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 38.3 ms