RNA–Protein interactions for RNA: YDR097C

MSH6, Transcript of Protein required for mismatch repair in mitosis and meiosis, yeastyeast

Gene MSH6, Length 3,729 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH6YDR097C GMC2Q06201 188 aa1.52□□□□□ -2.17
MSH6YDR097C SMD2Q06217 110 aaKnown RBP1.52□□□□□ -2.17
MSH6YDR097C YPL199CQ08954 240 aa1.52□□□□□ -2.17
MSH6YDR097C VIK1Q12045 647 aa1.52□□□□□ -2.17
MSH6YDR097C SEN1Q00416 2231 aaKnown RBP1.52□□□□□ -2.17
MSH6YDR097C FKS1P38631 1876 aaKnown RBP1.52□□□□□ -2.17
MSH6YDR097C MCK1P21965 375 aaKnown RBP1.51□□□□□ -2.17
MSH6YDR097C TOR2P32600 2474 aaKnown RBP1.51□□□□□ -2.17
MSH6YDR097C MNS1P32906 549 aa1.51□□□□□ -2.17
MSH6YDR097C PRS2P38620 318 aaKnown RBP1.51□□□□□ -2.17
MSH6YDR097C YHR182WP38870 785 aa1.51□□□□□ -2.17
MSH6YDR097C SMB1P40018 196 aaKnown RBP1.51□□□□□ -2.17
MSH6YDR097C SER33P40510 469 aa1.51□□□□□ -2.17
MSH6YDR097C CPR7P47103 393 aa1.51□□□□□ -2.17
MSH6YDR097C MRM2P53123 320 aa1.51□□□□□ -2.17
MSH6YDR097C TPC1P53257 314 aa1.51□□□□□ -2.17
MSH6YDR097C HCH1P53834 153 aa1.51□□□□□ -2.17
MSH6YDR097C SPP2Q02521 185 aa1.51□□□□□ -2.17
MSH6YDR097C OST6Q03723 332 aa1.51□□□□□ -2.17
MSH6YDR097C ATG17Q06410 417 aa1.51□□□□□ -2.17
MSH6YDR097C MIM1Q08176 113 aa1.51□□□□□ -2.17
MSH6YDR097C DSE3Q08729 430 aa1.51□□□□□ -2.17
MSH6YDR097C SLF1Q12034 447 aaKnown RBP1.51□□□□□ -2.17
MSH6YDR097C BBP1Q12365 385 aa1.51□□□□□ -2.17
MSH6YDR097C MEC1P38111 2368 aa1.51□□□□□ -2.17
MSH6YDR097C HIS3P06633 220 aa1.51□□□□□ -2.17
MSH6YDR097C RPL20AP0CX23 172 aaKnown RBP1.51□□□□□ -2.17
MSH6YDR097C RPL20BP0CX24 172 aaPredicted RBP1.51□□□□□ -2.17
MSH6YDR097C MATALPHA1P0CY06 175 aa1.51□□□□□ -2.17
MSH6YDR097C HMLALPHA1P0CY07 175 aa1.51□□□□□ -2.17
MSH6YDR097C ADE1P27616 306 aa1.51□□□□□ -2.17
MSH6YDR097C MUD1P32605 298 aaKnown RBP1.51□□□□□ -2.17
MSH6YDR097C YBR096WP38256 230 aa1.51□□□□□ -2.17
MSH6YDR097C FES1P38260 290 aa1.51□□□□□ -2.17
MSH6YDR097C YBR285WP38354 144 aa1.51□□□□□ -2.17
MSH6YDR097C FMP32P43557 207 aa1.51□□□□□ -2.17
MSH6YDR097C SCW4P53334 386 aaKnown RBP1.51□□□□□ -2.17
MSH6YDR097C CDC123Q05791 360 aa1.51□□□□□ -2.17
MSH6YDR097C BER1Q06688 274 aaKnown RBP1.51□□□□□ -2.17
MSH6YDR097C MRX9Q07349 420 aaKnown RBP1.51□□□□□ -2.17
MSH6YDR097C YLR053CQ12026 108 aa1.51□□□□□ -2.17
MSH6YDR097C YOR342CQ12182 319 aa1.51□□□□□ -2.17
MSH6YDR097C SEC4P07560 215 aaKnown RBP1.51□□□□□ -2.17
MSH6YDR097C RPS18AP0CX55 146 aaKnown RBP1.51□□□□□ -2.17
MSH6YDR097C RPS18BP0CX56 146 aaPredicted RBP1.51□□□□□ -2.17
MSH6YDR097C DAL81P21657 970 aa1.51□□□□□ -2.17
MSH6YDR097C VPS3P23643 1011 aa1.51□□□□□ -2.17
MSH6YDR097C MGT1P26188 188 aa1.51□□□□□ -2.17
MSH6YDR097C ITR2P30606 609 aa1.51□□□□□ -2.17
MSH6YDR097C AGA1P32323 725 aa1.51□□□□□ -2.17
MSH6YDR097C TAF14P35189 244 aa1.51□□□□□ -2.17
MSH6YDR097C KDX1P36005 433 aa1.51□□□□□ -2.17
MSH6YDR097C RIB5P38145 238 aa1.51□□□□□ -2.17
MSH6YDR097C FMP23P38231 175 aa1.51□□□□□ -2.17
MSH6YDR097C PRM5P40476 318 aa1.51□□□□□ -2.17
MSH6YDR097C SAD1P43589 448 aa1.51□□□□□ -2.17
MSH6YDR097C YJR054WP47114 497 aa1.51□□□□□ -2.17
MSH6YDR097C SYF2P53277 215 aaPredicted RBP1.51□□□□□ -2.17
MSH6YDR097C YMR099CQ03161 297 aaKnown RBP1.51□□□□□ -2.17
MSH6YDR097C YML108WQ03759 105 aa1.51□□□□□ -2.17
MSH6YDR097C YMR317WQ04893 1140 aa1.51□□□□□ -2.17
MSH6YDR097C COQ10Q08058 207 aa1.51□□□□□ -2.17
MSH6YDR097C UIP4Q08926 304 aa1.51□□□□□ -2.17
MSH6YDR097C THP3Q12049 470 aaKnown RBP1.51□□□□□ -2.17
MSH6YDR097C RFM1Q12192 310 aa1.51□□□□□ -2.17
MSH6YDR097C NOT5Q12514 560 aaPredicted RBP1.51□□□□□ -2.17
MSH6YDR097C PET494P07390 489 aaPredicted RBP1.5□□□□□ -2.17
MSH6YDR097C MSI1P13712 422 aa1.5□□□□□ -2.17
MSH6YDR097C CDC50P25656 391 aa1.5□□□□□ -2.17
MSH6YDR097C PAN6P40459 309 aa1.5□□□□□ -2.17
MSH6YDR097C OST1P41543 476 aaKnown RBP1.5□□□□□ -2.17
MSH6YDR097C YPI1P43587 155 aa1.5□□□□□ -2.17
MSH6YDR097C YJR085CP47131 105 aaKnown RBP1.5□□□□□ -2.17
MSH6YDR097C YGR015CP53208 328 aa1.5□□□□□ -2.17
MSH6YDR097C RPL22BP56628 122 aaKnown RBP1.5□□□□□ -2.17
MSH6YDR097C TMA20P89886 181 aaPredicted RBP1.5□□□□□ -2.17
MSH6YDR097C PRM6Q04705 352 aa1.5□□□□□ -2.17
MSH6YDR097C YDR222WQ04925 415 aa1.5□□□□□ -2.17
MSH6YDR097C ECM19Q06011 112 aa1.5□□□□□ -2.17
MSH6YDR097C YPR091CQ06833 770 aa1.5□□□□□ -2.17
MSH6YDR097C YET3Q07451 203 aa1.5□□□□□ -2.17
MSH6YDR097C ESA1Q08649 445 aa1.5□□□□□ -2.17
MSH6YDR097C FCY22Q12119 530 aa1.5□□□□□ -2.17
MSH6YDR097C EMP46Q12396 444 aa1.5□□□□□ -2.17
MSH6YDR097C IRA1P18963 3092 aa1.5□□□□□ -2.17
MSH6YDR097C YAL064W-BO13512 126 aa1.5□□□□□ -2.17
MSH6YDR097C RHO1P06780 209 aaKnown RBP1.5□□□□□ -2.17
MSH6YDR097C RPL23AP0CX41 137 aaKnown RBP1.5□□□□□ -2.17
MSH6YDR097C RPL23BP0CX42 137 aaKnown RBP1.5□□□□□ -2.17
MSH6YDR097C ZWF1P11412 505 aaKnown RBP1.5□□□□□ -2.17
MSH6YDR097C TFS1P14306 219 aa1.5□□□□□ -2.17
MSH6YDR097C GCN3P14741 305 aa1.5□□□□□ -2.17
MSH6YDR097C GRX2P17695 143 aaKnown RBP1.5□□□□□ -2.17
MSH6YDR097C CKA2P19454 339 aa1.5□□□□□ -2.17
MSH6YDR097C RBK1P25332 333 aa1.5□□□□□ -2.17
MSH6YDR097C PBN1P25580 416 aa1.5□□□□□ -2.17
MSH6YDR097C ASF2P32448 525 aaPredicted RBP1.5□□□□□ -2.17
MSH6YDR097C CLG1P35190 452 aa1.5□□□□□ -2.17
MSH6YDR097C FRM2P37261 193 aa1.5□□□□□ -2.17
MSH6YDR097C SWD3P38123 315 aa1.5□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 54.3 ms