RNA–Protein interactions for RNA: YDL090C

RAM1, Transcript of Beta subunit of the CAAX farnesyltransferase (FTase), yeast

Gene RAM1, Length 1,296 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAM1	YDL090C	PGU1	P47180	361 aa		4.26	□□□□□ -1.73
RAM1	YDL090C	YNL095C	P53932	642 aa		4.26	□□□□□ -1.73
RAM1	YDL090C	RPL21A	Q02753	160 aa	Known RBP	4.26	□□□□□ -1.73
RAM1	YDL090C	SEC10	Q06245	871 aa		4.26	□□□□□ -1.73
RAM1	YDL090C	CSM4	Q08955	156 aa		4.26	□□□□□ -1.73
RAM1	YDL090C	VIK1	Q12045	647 aa		4.26	□□□□□ -1.73
RAM1	YDL090C	YDR018C	Q12185	396 aa		4.26	□□□□□ -1.73
RAM1	YDL090C	WTM1	Q12363	437 aa	Known RBP	4.26	□□□□□ -1.73
RAM1	YDL090C	YOS9	Q99220	542 aa		4.26	□□□□□ -1.73
RAM1	YDL090C	COQ1	P18900	473 aa		4.25	□□□□□ -1.73
RAM1	YDL090C	RPL24B	P24000	155 aa	Known RBP	4.25	□□□□□ -1.73
RAM1	YDL090C	FRM2	P37261	193 aa		4.25	□□□□□ -1.73
RAM1	YDL090C	RFT1	P38206	574 aa	Predicted RBP	4.25	□□□□□ -1.73
RAM1	YDL090C	SHE3	P38272	425 aa	Known RBP	4.25	□□□□□ -1.73
RAM1	YDL090C	YBR242W	P38331	238 aa		4.25	□□□□□ -1.73
RAM1	YDL090C	AVT7	P40501	490 aa		4.25	□□□□□ -1.73
RAM1	YDL090C	GVP36	P40531	326 aa	Known RBP	4.25	□□□□□ -1.73
RAM1	YDL090C	IML1	P47170	1584 aa		4.25	□□□□□ -1.73
RAM1	YDL090C	NBP35	P52920	328 aa		4.25	□□□□□ -1.73
RAM1	YDL090C	FMP48	P53233	369 aa		4.25	□□□□□ -1.73
RAM1	YDL090C	SPC24	Q04477	213 aa		4.25	□□□□□ -1.73
RAM1	YDL090C	DCR2	Q05924	578 aa		4.25	□□□□□ -1.73
RAM1	YDL090C	YPL278C	Q08990	100 aa		4.25	□□□□□ -1.73
RAM1	YDL090C	DNF3	Q12674	1656 aa		4.25	□□□□□ -1.73
RAM1	YDL090C	THP2	O13539	261 aa	Known RBP	4.24	□□□□□ -1.73
RAM1	YDL090C	SEN2	P16658	377 aa		4.24	□□□□□ -1.73
RAM1	YDL090C	HSP30	P25619	332 aa		4.24	□□□□□ -1.73
RAM1	YDL090C	EHD3	P28817	500 aa		4.24	□□□□□ -1.73
RAM1	YDL090C	HOM6	P31116	359 aa	Known RBP	4.24	□□□□□ -1.73
RAM1	YDL090C	ECM4	P36156	370 aa		4.24	□□□□□ -1.73
RAM1	YDL090C	MIC12	P38341	106 aa		4.24	□□□□□ -1.73
RAM1	YDL090C	RTC3	P38804	111 aa	Predicted RBP	4.24	□□□□□ -1.73
RAM1	YDL090C	GGC1	P38988	300 aa		4.24	□□□□□ -1.73
RAM1	YDL090C	YKR005C	Q02203	525 aa		4.24	□□□□□ -1.73
RAM1	YDL090C	CTF19	Q02732	369 aa		4.24	□□□□□ -1.73
RAM1	YDL090C	MRPS17	Q03246	237 aa	Predicted RBP	4.24	□□□□□ -1.73
RAM1	YDL090C	API2	Q04413	109 aa		4.24	□□□□□ -1.73
RAM1	YDL090C	ATG38	Q05789	226 aa	Known RBP	4.24	□□□□□ -1.73
RAM1	YDL090C	NKP2	Q06162	153 aa		4.24	□□□□□ -1.73
RAM1	YDL090C	LSO2	Q3E772	92 aa	Known RBP	4.24	□□□□□ -1.73
RAM1	YDL090C	TY2B-LR1	P0C2J3	1770 aa		4.24	□□□□□ -1.73
RAM1	YDL090C	TY2B-F	P0CX63	1770 aa		4.24	□□□□□ -1.73
RAM1	YDL090C	TY2B-GR2	P0CX64	1770 aa		4.24	□□□□□ -1.73
RAM1	YDL090C	TY2B-C	P25384	1770 aa		4.24	□□□□□ -1.73
RAM1	YDL090C	TY2B-DR2	Q03494	1770 aa		4.24	□□□□□ -1.73
RAM1	YDL090C	TY1B-DR1	Q03855	1755 aa		4.24	□□□□□ -1.73
RAM1	YDL090C	TY2B-DR3	Q07791	1770 aa	Known RBP	4.24	□□□□□ -1.73
RAM1	YDL090C	TY2B-OR1	Q12113	1770 aa		4.24	□□□□□ -1.73
RAM1	YDL090C	TY2B-DR1	Q12472	1770 aa		4.24	□□□□□ -1.73
RAM1	YDL090C	TY2B-B	Q12491	1770 aa		4.24	□□□□□ -1.73
RAM1	YDL090C	TY2B-OR2	Q12501	1770 aa		4.24	□□□□□ -1.73
RAM1	YDL090C	BNI1	P41832	1953 aa		4.23	□□□□□ -1.73
RAM1	YDL090C	YAL064W-B	O13512	126 aa		4.23	□□□□□ -1.73
RAM1	YDL090C	JIP3	O13555	125 aa		4.23	□□□□□ -1.73
RAM1	YDL090C	RPL22A	P05749	121 aa	Known RBP	4.23	□□□□□ -1.73
RAM1	YDL090C	NMT1	P14743	455 aa		4.23	□□□□□ -1.73
RAM1	YDL090C	PEX3	P28795	441 aa		4.23	□□□□□ -1.73
RAM1	YDL090C	VMA6	P32366	345 aa	Known RBP	4.23	□□□□□ -1.73
RAM1	YDL090C	ALK2	P32789	676 aa	Predicted RBP	4.23	□□□□□ -1.73
RAM1	YDL090C	JEN1	P36035	616 aa		4.23	□□□□□ -1.73
RAM1	YDL090C	YBR096W	P38256	230 aa		4.23	□□□□□ -1.73
RAM1	YDL090C	EFM1	P38732	585 aa		4.23	□□□□□ -1.73
RAM1	YDL090C	RPC17	P47076	161 aa		4.23	□□□□□ -1.73
RAM1	YDL090C	YJR079W	P47126	109 aa		4.23	□□□□□ -1.73
RAM1	YDL090C	HSH155	P49955	971 aa	Known RBP	4.23	□□□□□ -1.73
RAM1	YDL090C	ZRG17	P53735	605 aa		4.23	□□□□□ -1.73
RAM1	YDL090C	SWP1	Q02795	286 aa		4.23	□□□□□ -1.73
RAM1	YDL090C	INP1	Q03694	420 aa		4.23	□□□□□ -1.73
RAM1	YDL090C	YMR244W	Q04018	355 aa		4.23	□□□□□ -1.73
RAM1	YDL090C	RIO1	Q12196	484 aa	Known RBP	4.23	□□□□□ -1.73
RAM1	YDL090C	YPL119C-A	Q3E751	87 aa		4.23	□□□□□ -1.73
RAM1	YDL090C	YOR093C	Q12275	1648 aa		4.23	□□□□□ -1.73
RAM1	YDL090C	RME1	P32338	300 aa	Known RBP	4.22	□□□□□ -1.73
RAM1	YDL090C	TIP20	P33891	701 aa		4.22	□□□□□ -1.73
RAM1	YDL090C	RIB1	P38066	345 aa		4.22	□□□□□ -1.73
RAM1	YDL090C	SMP1	P38128	452 aa		4.22	□□□□□ -1.73
RAM1	YDL090C	MAL32	P38158	584 aa		4.22	□□□□□ -1.73
RAM1	YDL090C	FES1	P38260	290 aa		4.22	□□□□□ -1.73
RAM1	YDL090C	THO1	P40040	218 aa	Known RBP	4.22	□□□□□ -1.73
RAM1	YDL090C	USE1	P53146	245 aa		4.22	□□□□□ -1.73
RAM1	YDL090C	MAL12	P53341	584 aa		4.22	□□□□□ -1.73
RAM1	YDL090C	ASI3	P53983	676 aa		4.22	□□□□□ -1.73
RAM1	YDL090C	BNA7	Q04066	261 aa		4.22	□□□□□ -1.73
RAM1	YDL090C	ECM11	Q04110	302 aa		4.22	□□□□□ -1.73
RAM1	YDL090C	SSQ1	Q05931	657 aa	Predicted RBP	4.22	□□□□□ -1.73
RAM1	YDL090C	ATG17	Q06410	417 aa		4.22	□□□□□ -1.73
RAM1	YDL090C	RAX2	Q12465	1220 aa		4.22	□□□□□ -1.73
RAM1	YDL090C	VTH1	P40438	1549 aa		4.21	□□□□□ -1.73
RAM1	YDL090C	VTH2	P40890	1549 aa		4.21	□□□□□ -1.73
RAM1	YDL090C	COX4	P04037	155 aa		4.21	□□□□□ -1.74
RAM1	YDL090C	CDC33	P07260	213 aa	Known RBP	4.21	□□□□□ -1.74
RAM1	YDL090C	ASP3-2	P0CX77	362 aa		4.21	□□□□□ -1.74
RAM1	YDL090C	ASP3-3	P0CX78	362 aa		4.21	□□□□□ -1.74
RAM1	YDL090C	ASP3-4	P0CX79	362 aa		4.21	□□□□□ -1.74
RAM1	YDL090C	ASP3-1	P0CZ17	362 aa		4.21	□□□□□ -1.74
RAM1	YDL090C	MRPL25	P23369	157 aa		4.21	□□□□□ -1.74
RAM1	YDL090C	BUD23	P25627	275 aa	Predicted RBP	4.21	□□□□□ -1.74
RAM1	YDL090C	TPS2	P31688	896 aa	Known RBP	4.21	□□□□□ -1.74
RAM1	YDL090C	MGM101	P32787	269 aa	Known RBP	4.21	□□□□□ -1.74
RAM1	YDL090C	VPS21	P36017	210 aa	Known RBP	4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 38.6 ms