RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 CIAPIN1Q6FI81 312 aa12.79□□□□□ -0.36
ERBB2-206ENST00000578373 SPATA21Q7Z572 469 aa12.79□□□□□ -0.36
ERBB2-206ENST00000578373 SP8Q8IXZ3 490 aa12.79□□□□□ -0.36
ERBB2-206ENST00000578373 SLC17A8Q8NDX2 589 aa12.79□□□□□ -0.36
ERBB2-206ENST00000578373 SLC20A1Q8WUM9 679 aa12.79□□□□□ -0.36
ERBB2-206ENST00000578373 CDHR1Q96JP9 859 aa12.79□□□□□ -0.36
ERBB2-206ENST00000578373 AGPAT3Q9NRZ7 376 aa12.79□□□□□ -0.36
ERBB2-206ENST00000578373 RAB21Q9UL25 225 aa12.79□□□□□ -0.36
ERBB2-206ENST00000578373 FRMPD1Q5SYB0 1578 aa12.79□□□□□ -0.36
ERBB2-206ENST00000578373 CCDC78A2IDD5 438 aa12.79□□□□□ -0.36
ERBB2-206ENST00000578373 POLRMTO00411 1230 aaKnown RBP12.79□□□□□ -0.36
ERBB2-206ENST00000578373 PPFIA2O75334 1257 aa12.79□□□□□ -0.36
ERBB2-206ENST00000578373 UBE4BO95155 1302 aa12.79□□□□□ -0.36
ERBB2-206ENST00000578373 HMGCS2P54868 508 aa12.79□□□□□ -0.36
ERBB2-206ENST00000578373 MAPK6Q16659 721 aa12.79□□□□□ -0.36
ERBB2-206ENST00000578373 CBWD2Q8IUF1 395 aa12.79□□□□□ -0.36
ERBB2-206ENST00000578373 NUDCD1Q96RS6 583 aa12.79□□□□□ -0.36
ERBB2-206ENST00000578373 TRABDQ9H4I3 376 aa12.79□□□□□ -0.36
ERBB2-206ENST00000578373 E2F8A0AVK6 867 aa12.79□□□□□ -0.36
ERBB2-206ENST00000578373 WDR72Q3MJ13 1102 aa12.79□□□□□ -0.36
ERBB2-206ENST00000578373 WDR59Q6PJI9 974 aa12.79□□□□□ -0.36
ERBB2-206ENST00000578373 GBP7Q8N8V2 638 aaPredicted RBP12.79□□□□□ -0.36
ERBB2-206ENST00000578373 RAPGEF5Q92565 580 aa12.79□□□□□ -0.36
ERBB2-206ENST00000578373 RBM41Q96IZ5 413 aaKnown RBP12.79□□□□□ -0.36
ERBB2-206ENST00000578373 TMEM39BQ9GZU3 492 aa12.79□□□□□ -0.36
ERBB2-206ENST00000578373 VPS11Q9H270 941 aa12.79□□□□□ -0.36
ERBB2-206ENST00000578373 BLOC1S4Q9NUP1 217 aa12.79□□□□□ -0.36
ERBB2-206ENST00000578373 PCDHA10Q9Y5I2 948 aa12.79□□□□□ -0.36
ERBB2-206ENST00000578373 PHF2O75151 1096 aa12.78□□□□□ -0.36
ERBB2-206ENST00000578373 DNAJC3Q13217 504 aa12.78□□□□□ -0.36
ERBB2-206ENST00000578373 LRRC36Q1X8D7 754 aa12.78□□□□□ -0.36
ERBB2-206ENST00000578373 CREG2Q8IUH2 290 aa12.78□□□□□ -0.36
ERBB2-206ENST00000578373 DEPDC1BQ8WUY9 529 aa12.78□□□□□ -0.36
ERBB2-206ENST00000578373 ERP27Q96DN0 273 aa12.78□□□□□ -0.36
ERBB2-206ENST00000578373 SPDL1Q96EA4 605 aa12.78□□□□□ -0.36
ERBB2-206ENST00000578373 SLC40A1Q9NP59 571 aa12.78□□□□□ -0.36
ERBB2-206ENST00000578373 NOL3O60936 208 aaKnown RBP12.78□□□□□ -0.36
ERBB2-206ENST00000578373 SGPL1O95470 568 aa12.78□□□□□ -0.36
ERBB2-206ENST00000578373 HSPA9P38646 679 aaKnown RBP12.78□□□□□ -0.36
ERBB2-206ENST00000578373 ARL4AP40617 200 aa12.78□□□□□ -0.36
ERBB2-206ENST00000578373 NT5C2P49902 561 aa12.78□□□□□ -0.36
ERBB2-206ENST00000578373 KRT76Q01546 638 aa12.78□□□□□ -0.36
ERBB2-206ENST00000578373 SEMA3FQ13275 785 aa12.78□□□□□ -0.36
ERBB2-206ENST00000578373 TFDP1Q14186 410 aa12.78□□□□□ -0.36
ERBB2-206ENST00000578373 SH3RF1Q7Z6J0 888 aa12.78□□□□□ -0.36
ERBB2-206ENST00000578373 ATL2Q8NHH9 583 aa12.78□□□□□ -0.36
ERBB2-206ENST00000578373 FBXO41Q8TF61 875 aa12.78□□□□□ -0.36
ERBB2-206ENST00000578373 FAM161BQ96MY7 647 aa12.78□□□□□ -0.36
ERBB2-206ENST00000578373 NPHS2Q9NP85 383 aa12.78□□□□□ -0.36
ERBB2-206ENST00000578373 TMEM150BA6NC51 233 aa12.78□□□□□ -0.36
ERBB2-206ENST00000578373 WEE2P0C1S8 567 aa12.78□□□□□ -0.36
ERBB2-206ENST00000578373 ARP10275 920 aa12.78□□□□□ -0.36
ERBB2-206ENST00000578373 JAK3P52333 1124 aa12.78□□□□□ -0.36
ERBB2-206ENST00000578373 ITGA8P53708 1063 aa12.78□□□□□ -0.36
ERBB2-206ENST00000578373 PPP4CP60510 307 aa12.78□□□□□ -0.36
ERBB2-206ENST00000578373 GIT2Q14161 759 aa12.78□□□□□ -0.36
ERBB2-206ENST00000578373 FAM102AQ5T9C2 384 aaPredicted RBP12.78□□□□□ -0.36
ERBB2-206ENST00000578373 SPOPLQ6IQ16 392 aa12.78□□□□□ -0.36
ERBB2-206ENST00000578373 PPP1R36Q96LQ0 422 aa12.78□□□□□ -0.36
ERBB2-206ENST00000578373 TRIM4Q9C037 500 aa12.78□□□□□ -0.36
ERBB2-206ENST00000578373 IQANK1A0A1B0GTG1 560 aa12.78□□□□□ -0.36
ERBB2-206ENST00000578373 KRT37O76014 449 aa12.78□□□□□ -0.36
ERBB2-206ENST00000578373 HAUS5O94927 633 aa12.78□□□□□ -0.36
ERBB2-206ENST00000578373 LUC7L3O95232 432 aaKnown RBP12.78□□□□□ -0.36
ERBB2-206ENST00000578373 CDH6P55285 790 aa12.78□□□□□ -0.36
ERBB2-206ENST00000578373 SOX10P56693 466 aa12.78□□□□□ -0.36
ERBB2-206ENST00000578373 KDSRQ06136 332 aa12.78□□□□□ -0.36
ERBB2-206ENST00000578373 DPP9Q86TI2 863 aa12.78□□□□□ -0.36
ERBB2-206ENST00000578373 GPD1LQ8N335 351 aa12.78□□□□□ -0.36
ERBB2-206ENST00000578373 NSUN6Q8TEA1 469 aaKnown RBP12.78□□□□□ -0.36
ERBB2-206ENST00000578373 DHX38Q92620 1227 aaKnown RBP12.78□□□□□ -0.36
ERBB2-206ENST00000578373 SEMA4AQ9H3S1 761 aa12.78□□□□□ -0.36
ERBB2-206ENST00000578373 ACP6Q9NPH0 428 aa12.78□□□□□ -0.36
ERBB2-206ENST00000578373 KCNH7Q9NS40 1196 aa12.78□□□□□ -0.36
ERBB2-206ENST00000578373 TMEM253P0C7T8 217 aa12.77□□□□□ -0.36
ERBB2-206ENST00000578373 CNGA1P29973 690 aa12.77□□□□□ -0.36
ERBB2-206ENST00000578373 ERVK-9P63128 1117 aa12.77□□□□□ -0.36
ERBB2-206ENST00000578373 TRADDQ15628 312 aa12.77□□□□□ -0.36
ERBB2-206ENST00000578373 RYBPQ8N488 228 aaPredicted RBP12.77□□□□□ -0.36
ERBB2-206ENST00000578373 RTFDC1Q9BY42 306 aaPredicted RBP12.77□□□□□ -0.36
ERBB2-206ENST00000578373 M0QYV0 167 aa12.77□□□□□ -0.37
ERBB2-206ENST00000578373 RALAP11233 206 aa12.77□□□□□ -0.37
ERBB2-206ENST00000578373 SKIP12755 728 aa12.77□□□□□ -0.37
ERBB2-206ENST00000578373 ARFIP2P53365 341 aa12.77□□□□□ -0.37
ERBB2-206ENST00000578373 NOP14P78316 857 aaKnown RBP12.77□□□□□ -0.37
ERBB2-206ENST00000578373 NFX1Q12986 1120 aaKnown RBP12.77□□□□□ -0.37
ERBB2-206ENST00000578373 DBN1Q16643 649 aa12.77□□□□□ -0.37
ERBB2-206ENST00000578373 SLFN12LQ6IEE8 588 aa12.77□□□□□ -0.37
ERBB2-206ENST00000578373 TRPM8Q7Z2W7 1104 aa12.77□□□□□ -0.37
ERBB2-206ENST00000578373 FAM81BQ96LP2 452 aa12.77□□□□□ -0.37
ERBB2-206ENST00000578373 OSBPL1AQ9BXW6 950 aa12.77□□□□□ -0.37
ERBB2-206ENST00000578373 OSBPL8Q9BZF1 889 aa12.77□□□□□ -0.37
ERBB2-206ENST00000578373 LRRC4Q9HBW1 653 aa12.77□□□□□ -0.37
ERBB2-206ENST00000578373 FEM1BQ9UK73 627 aa12.77□□□□□ -0.37
ERBB2-206ENST00000578373 PPP1R9AQ9ULJ8 1098 aa12.77□□□□□ -0.37
ERBB2-206ENST00000578373 DDTLA6NHG4 134 aaPredicted RBP12.77□□□□□ -0.37
ERBB2-206ENST00000578373 DCTN3O75935 186 aa12.77□□□□□ -0.37
ERBB2-206ENST00000578373 KRT10P13645 584 aa12.77□□□□□ -0.37
ERBB2-206ENST00000578373 RGS7P49802 495 aa12.77□□□□□ -0.37
ERBB2-206ENST00000578373 MTMR2Q13614 643 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms