RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 DEFB128Q7Z7B8 93 aa18.02■□□□□ 0.47
TPM1-219ENST00000559397 PPFIBP1Q86W92 1011 aa18.02■□□□□ 0.47
TPM1-219ENST00000559397 CDR2LQ86X02 465 aaPredicted RBP18.02■□□□□ 0.47
TPM1-219ENST00000559397 TRIM59Q8IWR1 403 aa18.02■□□□□ 0.47
TPM1-219ENST00000559397 DBF4BQ8NFT6 615 aa18.02■□□□□ 0.47
TPM1-219ENST00000559397 NDST4Q9H3R1 872 aa18.02■□□□□ 0.47
TPM1-219ENST00000559397 CHST12Q9NRB3 414 aa18.02■□□□□ 0.47
TPM1-219ENST00000559397 AGPAT3Q9NRZ7 376 aa18.02■□□□□ 0.47
TPM1-219ENST00000559397 PIN4Q9Y237 131 aaKnown RBP18.02■□□□□ 0.47
TPM1-219ENST00000559397 AKR1B15C9JRZ8 316 aaPredicted RBP18.01■□□□□ 0.47
TPM1-219ENST00000559397 MGEA5O60502 916 aa18.01■□□□□ 0.47
TPM1-219ENST00000559397 NR3C1P04150 777 aa18.01■□□□□ 0.47
TPM1-219ENST00000559397 GYPCP04921 128 aa18.01■□□□□ 0.47
TPM1-219ENST00000559397 KCNJ6P48051 423 aa18.01■□□□□ 0.47
TPM1-219ENST00000559397 RGS19P49795 217 aa18.01■□□□□ 0.47
TPM1-219ENST00000559397 TMEM139Q8IV31 216 aa18.01■□□□□ 0.47
TPM1-219ENST00000559397 GOLGA5Q8TBA6 731 aa18.01■□□□□ 0.47
TPM1-219ENST00000559397 TMEM174Q8WUU8 243 aa18.01■□□□□ 0.47
TPM1-219ENST00000559397 SEPT8Q92599 483 aa18.01■□□□□ 0.47
TPM1-219ENST00000559397 BADQ92934 168 aa18.01■□□□□ 0.47
TPM1-219ENST00000559397 PANX2Q96RD6 677 aa18.01■□□□□ 0.47
TPM1-219ENST00000559397 DMAC2Q9NW81 257 aa18.01■□□□□ 0.47
TPM1-219ENST00000559397 ZMYND8Q9ULU4 1186 aaPredicted RBP18.01■□□□□ 0.47
TPM1-219ENST00000559397 MCL1Q07820 350 aa18■□□□□ 0.47
TPM1-219ENST00000559397 GOLGA8FQ08AF8 430 aa18■□□□□ 0.47
TPM1-219ENST00000559397 GOLGA8DPQ0D2H9 430 aa18■□□□□ 0.47
TPM1-219ENST00000559397 CCDC40Q4G0X9 1142 aa18■□□□□ 0.47
TPM1-219ENST00000559397 UBXN11Q5T124 520 aa18■□□□□ 0.47
TPM1-219ENST00000559397 MPZL3Q6UWV2 235 aa18■□□□□ 0.47
TPM1-219ENST00000559397 HS2ST1Q7LGA3 356 aa18■□□□□ 0.47
TPM1-219ENST00000559397 FRMD5Q7Z6J6 570 aa18■□□□□ 0.47
TPM1-219ENST00000559397 C12orf56Q8IXR9 622 aa18■□□□□ 0.47
TPM1-219ENST00000559397 APBB2Q92870 758 aa18■□□□□ 0.47
TPM1-219ENST00000559397 CCDC51Q96ER9 411 aa18■□□□□ 0.47
TPM1-219ENST00000559397 CBWD1Q9BRT8 395 aa18■□□□□ 0.47
TPM1-219ENST00000559397 CGNQ9P2M7 1197 aaKnown RBP18■□□□□ 0.47
TPM1-219ENST00000559397 CLIC2O15247 247 aa17.99■□□□□ 0.47
TPM1-219ENST00000559397 SLC16A3O15427 465 aaKnown RBP17.99■□□□□ 0.47
TPM1-219ENST00000559397 MFAP3LO75121 409 aa17.99■□□□□ 0.47
TPM1-219ENST00000559397 GARTP22102 1010 aa17.99■□□□□ 0.47
TPM1-219ENST00000559397 ADKP55263 362 aaKnown RBP17.99■□□□□ 0.47
TPM1-219ENST00000559397 MYBPC2Q14324 1141 aa17.99■□□□□ 0.47
TPM1-219ENST00000559397 NOLC1Q14978 699 aaKnown RBP eCLIP17.99■□□□□ 0.47
TPM1-219ENST00000559397 TMEM132AQ24JP5 1023 aa17.99■□□□□ 0.47
TPM1-219ENST00000559397 FKBP15Q5T1M5 1219 aa17.99■□□□□ 0.47
TPM1-219ENST00000559397 FAM43BQ6ZT52 329 aaPredicted RBP17.99■□□□□ 0.47
TPM1-219ENST00000559397 RTN4RL1Q86UN2 441 aaPredicted RBP17.99■□□□□ 0.47
TPM1-219ENST00000559397 SLC9A9Q8IVB4 645 aa17.99■□□□□ 0.47
TPM1-219ENST00000559397 LINC01599Q8WXQ3 324 aa17.99■□□□□ 0.47
TPM1-219ENST00000559397 FTHL17Q9BXU8 183 aa17.99■□□□□ 0.47
TPM1-219ENST00000559397 CDT1Q9H211 546 aa17.99■□□□□ 0.47
TPM1-219ENST00000559397 KCND1Q9NSA2 647 aa17.99■□□□□ 0.47
TPM1-219ENST00000559397 ANKFY1Q9P2R3 1169 aa17.99■□□□□ 0.47
TPM1-219ENST00000559397 A0A0B4J269 797 aa17.99■□□□□ 0.47
TPM1-219ENST00000559397 PES1O00541 588 aaKnown RBP17.99■□□□□ 0.47
TPM1-219ENST00000559397 CLDN3O15551 220 aa17.99■□□□□ 0.47
TPM1-219ENST00000559397 NRDCO43847 1150 aa17.99■□□□□ 0.47
TPM1-219ENST00000559397 ZSCAN20P17040 1043 aaPredicted RBP17.99■□□□□ 0.47
TPM1-219ENST00000559397 FECHP22830 423 aa17.99■□□□□ 0.47
TPM1-219ENST00000559397 FXR1P51114 621 aaKnown RBP eCLIP17.99■□□□□ 0.47
TPM1-219ENST00000559397 SYCP1Q15431 976 aa17.99■□□□□ 0.47
TPM1-219ENST00000559397 SLFN12LQ6IEE8 588 aa17.99■□□□□ 0.47
TPM1-219ENST00000559397 CNKSR3Q6P9H4 555 aa17.99■□□□□ 0.47
TPM1-219ENST00000559397 SLC27A1Q6PCB7 646 aa17.99■□□□□ 0.47
TPM1-219ENST00000559397 CNGA4Q8IV77 575 aa17.99■□□□□ 0.47
TPM1-219ENST00000559397 RPUSD2Q8IZ73 545 aaKnown RBP17.99■□□□□ 0.47
TPM1-219ENST00000559397 C17orf53Q8N3J3 647 aaPredicted RBP17.99■□□□□ 0.47
TPM1-219ENST00000559397 TRAIPQ9BWF2 469 aa17.99■□□□□ 0.47
TPM1-219ENST00000559397 EIF2AQ9BY44 585 aaKnown RBP17.99■□□□□ 0.47
TPM1-219ENST00000559397 TTYH3Q9C0H2 523 aa17.99■□□□□ 0.47
TPM1-219ENST00000559397 IL23AQ9NPF7 189 aa17.99■□□□□ 0.47
TPM1-219ENST00000559397 RGS18Q9NS28 235 aa17.99■□□□□ 0.47
TPM1-219ENST00000559397 SIK3Q9Y2K2 1263 aa17.99■□□□□ 0.47
TPM1-219ENST00000559397 FAM189A1O60320 539 aa17.98■□□□□ 0.47
TPM1-219ENST00000559397 AKAP3O75969 853 aa17.98■□□□□ 0.47
TPM1-219ENST00000559397 PFKMP08237 780 aa17.98■□□□□ 0.47
TPM1-219ENST00000559397 CASP14P31944 242 aa17.98■□□□□ 0.47
TPM1-219ENST00000559397 FPGSQ05932 587 aa17.98■□□□□ 0.47
TPM1-219ENST00000559397 ZNF568Q3ZCX4 644 aa17.98■□□□□ 0.47
TPM1-219ENST00000559397 FIGNQ5HY92 759 aa17.98■□□□□ 0.47
TPM1-219ENST00000559397 TWF2Q6IBS0 349 aaKnown RBP17.98■□□□□ 0.47
TPM1-219ENST00000559397 C16orf59Q7L2K0 433 aa17.98■□□□□ 0.47
TPM1-219ENST00000559397 ZBTB33Q86T24 672 aa17.98■□□□□ 0.47
TPM1-219ENST00000559397 POMGNT1Q8WZA1 660 aa17.98■□□□□ 0.47
TPM1-219ENST00000559397 BORCS6Q96GS4 357 aa17.98■□□□□ 0.47
TPM1-219ENST00000559397 ADAM2Q99965 735 aa17.98■□□□□ 0.47
TPM1-219ENST00000559397 TCHPQ9BT92 498 aa17.98■□□□□ 0.47
TPM1-219ENST00000559397 MKNK1Q9BUB5 465 aa17.98■□□□□ 0.47
TPM1-219ENST00000559397 NUP58Q9BVL2 599 aa17.98■□□□□ 0.47
TPM1-219ENST00000559397 TSPYL2Q9H2G4 693 aaPredicted RBP17.98■□□□□ 0.47
TPM1-219ENST00000559397 METTL14Q9HCE5 456 aaKnown RBP17.98■□□□□ 0.47
TPM1-219ENST00000559397 NR2E3Q9Y5X4 410 aa17.98■□□□□ 0.47
TPM1-219ENST00000559397 MICAL3Q7RTP6 2002 aa17.97■□□□□ 0.47
TPM1-219ENST00000559397 RNF225M0QZC1 329 aaPredicted RBP17.97■□□□□ 0.47
TPM1-219ENST00000559397 STX10O60499 249 aa17.97■□□□□ 0.47
TPM1-219ENST00000559397 NPTXRO95502 500 aa17.97■□□□□ 0.47
TPM1-219ENST00000559397 TPM1P09493 284 aa17.97■□□□□ 0.47
TPM1-219ENST00000559397 ACRP10323 421 aa17.97■□□□□ 0.47
TPM1-219ENST00000559397 MCF2P10911 925 aa17.97■□□□□ 0.47
TPM1-219ENST00000559397 PPP2R3AQ06190 1150 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms