RNA–Protein interactions for RNA: ENST00000558655.5

ZEB1-212, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 2,773 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-212ENST00000558655 UBA7P41226 1012 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 TRPC1P48995 793 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 ZNF165P49910 485 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 NDUFA8P51970 172 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 SLC12A3P55017 1021 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 RTP1P59025 263 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 CHMP4BP1P59074 171 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 MCL1Q07820 350 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 GOLGA8FQ08AF8 430 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 GOLGA8DPQ0D2H9 430 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 LY6KQ17RY6 165 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 ALFQ53S48 1182 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 COBLL1Q53SF7 1204 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 IQCEQ6IPM2 695 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 CFAP161Q6P656 301 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 ZNF449Q6P9G9 518 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 SASS6Q6UVJ0 657 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 USP49Q70CQ1 688 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 KIAA0907Q7Z7F0 614 aaPredicted RBP4.46□□□□□ -1.7
ZEB1-212ENST00000558655 TLK2Q86UE8 772 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 C7orf61Q8IZ16 206 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 LINC01465Q8N7H1 131 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 SYT2Q8N9I0 419 aaPredicted RBP4.46□□□□□ -1.7
ZEB1-212ENST00000558655 IQUBQ8NA54 791 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 PPHLN1Q8NEY8 458 aaKnown RBP4.46□□□□□ -1.7
ZEB1-212ENST00000558655 OR6J1Q8NGC5 347 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 SNX29Q8TEQ0 813 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 DDX1Q92499 740 aaKnown RBP4.46□□□□□ -1.7
ZEB1-212ENST00000558655 CALML4Q96GE6 196 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 MPP4Q96JB8 637 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 FAM210AQ96ND0 272 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.46□□□□□ -1.7
ZEB1-212ENST00000558655 CLSTN2Q9H4D0 955 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 SMARCAD1Q9H4L7 1026 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 SUDS3Q9H7L9 328 aaPredicted RBP4.46□□□□□ -1.7
ZEB1-212ENST00000558655 SNTG2Q9NY99 539 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 ZIM2Q9NZV7 527 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 ZNF69Q9UC07 566 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 SUN2Q9UH99 717 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 ZHX1Q9UKY1 873 aaPredicted RBP4.46□□□□□ -1.7
ZEB1-212ENST00000558655 OGDHLQ9ULD0 1010 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 PHF24Q9UPV7 400 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 IPPQ9Y573 584 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 IGKV6-21A0A0C4DH24 114 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 USP27XA6NNY8 438 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 GAS2O43903 313 aaKnown RBP4.46□□□□□ -1.7
ZEB1-212ENST00000558655 ZNF862O60290 1169 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 ICMTO60725 284 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 SNX2O60749 519 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 LGALS2P05162 132 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 RPLP2P05387 115 aaKnown RBP4.46□□□□□ -1.7
ZEB1-212ENST00000558655 TPM2P07951 284 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 SKILP12757 684 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 PLCG1P19174 1290 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 GUCY2CP25092 1073 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 CCND3P30281 292 aaPredicted RBP4.46□□□□□ -1.7
ZEB1-212ENST00000558655 CCT6AP40227 531 aaKnown RBP4.46□□□□□ -1.7
ZEB1-212ENST00000558655 SYKP43405 635 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 NEK3P51956 506 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 ADAM17P78536 824 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 EHHADHQ08426 723 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 TRIM32Q13049 653 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 UGCGQ16739 394 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 DGKDQ16760 1214 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 XKR3Q5GH77 459 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 ZNF484Q5JVG2 852 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 NCAPH2Q6IBW4 605 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 FOXR2Q6PJQ5 311 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 CYFIP1Q7L576 1253 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 SPNS2Q8IVW8 549 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 CCDC60Q8IWA6 550 aaPredicted RBP4.46□□□□□ -1.7
ZEB1-212ENST00000558655 IQCF2Q8IXL9 164 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 RGL4Q8IZJ4 473 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 DEPDC4Q8N2C3 294 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 FAM200AQ8TCP9 573 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 ATP8B4Q8TF62 1192 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 DYDC2Q96IM9 177 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 EPSTI1Q96J88 318 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 SPATA33Q96N06 139 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 AP5M1Q9H0R1 490 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 BCAS3Q9H6U6 928 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 MLXIPQ9HAP2 919 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 ZNF302Q9NR11 478 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 MKS1Q9NXB0 559 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 TRMT1Q9NXH9 659 aaKnown RBP4.46□□□□□ -1.7
ZEB1-212ENST00000558655 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.46□□□□□ -1.7
ZEB1-212ENST00000558655 TBK1Q9UHD2 729 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 TUBE1Q9UJT0 475 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 V9GYY5 206 aaPredicted RBP4.46□□□□□ -1.7
ZEB1-212ENST00000558655 ANK1P16157 1881 aa4.46□□□□□ -1.7
ZEB1-212ENST00000558655 MOXD2PA6NHM9 499 aa4.45□□□□□ -1.7
ZEB1-212ENST00000558655 PP2D1A8MPX8 630 aa4.45□□□□□ -1.7
ZEB1-212ENST00000558655 ZBTB42B2RXF5 422 aa4.45□□□□□ -1.7
ZEB1-212ENST00000558655 ZEB2O60315 1214 aa4.45□□□□□ -1.7
ZEB1-212ENST00000558655 HBP1O60381 514 aa4.45□□□□□ -1.7
ZEB1-212ENST00000558655 TCEA3O75764 348 aa4.45□□□□□ -1.7
ZEB1-212ENST00000558655 ZNF202O95125 648 aa4.45□□□□□ -1.7
ZEB1-212ENST00000558655 OATP04181 439 aa4.45□□□□□ -1.7
ZEB1-212ENST00000558655 MAPTP10636 758 aaKnown RBP4.45□□□□□ -1.7
ZEB1-212ENST00000558655 RARBP10826 455 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms