RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 CXCL16Q9H2A7 254 aa24.9■■□□□ 1.58
PABPN1-207ENST00000556821 NGRNQ9NPE2 291 aaKnown RBP24.9■■□□□ 1.58
PABPN1-207ENST00000556821 MARCH5Q9NX47 278 aa24.9■■□□□ 1.58
PABPN1-207ENST00000556821 PARP2Q9UGN5 583 aa24.9■■□□□ 1.58
PABPN1-207ENST00000556821 TNFSF13BQ9Y275 285 aa24.9■■□□□ 1.58
PABPN1-207ENST00000556821 NRP1O14786 923 aa24.89■■□□□ 1.58
PABPN1-207ENST00000556821 RECQL4O94761 1208 aa24.89■■□□□ 1.58
PABPN1-207ENST00000556821 FOXD4L5Q5VV16 416 aaPredicted RBP24.89■■□□□ 1.58
PABPN1-207ENST00000556821 TMC7Q7Z402 723 aa24.89■■□□□ 1.58
PABPN1-207ENST00000556821 DDX53Q86TM3 631 aaKnown RBP24.89■■□□□ 1.58
PABPN1-207ENST00000556821 SPRYD3Q8NCJ5 442 aa24.89■■□□□ 1.58
PABPN1-207ENST00000556821 TMEM161BQ8NDZ6 487 aa24.89■■□□□ 1.58
PABPN1-207ENST00000556821 FOXD4L4Q8WXT5 416 aaPredicted RBP24.89■■□□□ 1.58
PABPN1-207ENST00000556821 LARP4BQ92615 738 aaKnown RBP24.89■■□□□ 1.58
PABPN1-207ENST00000556821 POP1Q99575 1024 aaKnown RBP24.89■■□□□ 1.58
PABPN1-207ENST00000556821 SNTG2Q9NY99 539 aa24.89■■□□□ 1.58
PABPN1-207ENST00000556821 CLEC1BQ9P126 229 aa24.89■■□□□ 1.58
PABPN1-207ENST00000556821 ODF2LQ9ULJ1 636 aa24.89■■□□□ 1.58
PABPN1-207ENST00000556821 RBM19Q9Y4C8 960 aaKnown RBP24.89■■□□□ 1.58
PABPN1-207ENST00000556821 TRIOO75962 3097 aa24.88■■□□□ 1.57
PABPN1-207ENST00000556821 DENND4AQ7Z401 1863 aa24.88■■□□□ 1.57
PABPN1-207ENST00000556821 ABLIM1O14639 778 aa24.88■■□□□ 1.57
PABPN1-207ENST00000556821 ZSCAN22P10073 491 aaPredicted RBP24.88■■□□□ 1.57
PABPN1-207ENST00000556821 GRIK3Q13003 919 aa24.88■■□□□ 1.57
PABPN1-207ENST00000556821 KCNC3Q14003 757 aa24.88■■□□□ 1.57
PABPN1-207ENST00000556821 DCAF4L1Q3SXM0 396 aa24.88■■□□□ 1.57
PABPN1-207ENST00000556821 TRIM67Q6ZTA4 783 aa24.88■■□□□ 1.57
PABPN1-207ENST00000556821 VPS52Q8N1B4 723 aa24.88■■□□□ 1.57
PABPN1-207ENST00000556821 LINC00301Q8NCQ3 95 aa24.88■■□□□ 1.57
PABPN1-207ENST00000556821 MSLNLQ96KJ4 702 aa24.88■■□□□ 1.57
PABPN1-207ENST00000556821 ACO2Q99798 780 aaKnown RBP24.88■■□□□ 1.57
PABPN1-207ENST00000556821 TARS2Q9BW92 718 aaKnown RBP24.88■■□□□ 1.57
PABPN1-207ENST00000556821 PTPRHQ9HD43 1115 aa24.88■■□□□ 1.57
PABPN1-207ENST00000556821 FAN1Q9Y2M0 1017 aa24.88■■□□□ 1.57
PABPN1-207ENST00000556821 TMEM221A6NGB7 291 aa24.87■■□□□ 1.57
PABPN1-207ENST00000556821 C2orf71A6NGG8 1288 aa24.87■■□□□ 1.57
PABPN1-207ENST00000556821 M0R296 226 aa24.87■■□□□ 1.57
PABPN1-207ENST00000556821 PTGESO14684 152 aa24.87■■□□□ 1.57
PABPN1-207ENST00000556821 F13A1P00488 732 aa24.87■■□□□ 1.57
PABPN1-207ENST00000556821 SMC1AQ14683 1233 aaKnown RBP24.87■■□□□ 1.57
PABPN1-207ENST00000556821 CEP120Q8N960 986 aa24.87■■□□□ 1.57
PABPN1-207ENST00000556821 MRPL43Q8N983 215 aaKnown RBP24.87■■□□□ 1.57
PABPN1-207ENST00000556821 KRI1Q8N9T8 703 aaKnown RBP24.87■■□□□ 1.57
PABPN1-207ENST00000556821 AUTS2Q8WXX7 1259 aa24.87■■□□□ 1.57
PABPN1-207ENST00000556821 MRPL4Q9BYD3 311 aaKnown RBP24.87■■□□□ 1.57
PABPN1-207ENST00000556821 CDT1Q9H211 546 aa24.87■■□□□ 1.57
PABPN1-207ENST00000556821 TFIP11Q9UBB9 837 aaKnown RBP24.87■■□□□ 1.57
PABPN1-207ENST00000556821 BARX2Q9UMQ3 279 aaPredicted RBP24.87■■□□□ 1.57
PABPN1-207ENST00000556821 PRG3Q9Y2Y8 225 aaPredicted RBP24.87■■□□□ 1.57
PABPN1-207ENST00000556821 USP34Q70CQ2 3546 aa24.87■■□□□ 1.57
PABPN1-207ENST00000556821 F8W810 466 aa24.86■■□□□ 1.57
PABPN1-207ENST00000556821 EFEMP2O95967 443 aa24.86■■□□□ 1.57
PABPN1-207ENST00000556821 ALDH2P05091 517 aa24.86■■□□□ 1.57
PABPN1-207ENST00000556821 CTSAP10619 480 aa24.86■■□□□ 1.57
PABPN1-207ENST00000556821 MAPTP10636 758 aaKnown RBP24.86■■□□□ 1.57
PABPN1-207ENST00000556821 PROZP22891 400 aa24.86■■□□□ 1.57
PABPN1-207ENST00000556821 NDUFV1P49821 464 aa24.86■■□□□ 1.57
PABPN1-207ENST00000556821 ZNF131P52739 623 aa24.86■■□□□ 1.57
PABPN1-207ENST00000556821 NCKAP1LP55160 1127 aa24.86■■□□□ 1.57
PABPN1-207ENST00000556821 GIT2Q14161 759 aa24.86■■□□□ 1.57
PABPN1-207ENST00000556821 STK38Q15208 465 aa24.86■■□□□ 1.57
PABPN1-207ENST00000556821 CLUL1Q15846 466 aa24.86■■□□□ 1.57
PABPN1-207ENST00000556821 PBXIP1Q96AQ6 731 aa24.86■■□□□ 1.57
PABPN1-207ENST00000556821 RPS6KC1Q96S38 1066 aa24.86■■□□□ 1.57
PABPN1-207ENST00000556821 CDCA3Q99618 268 aaPredicted RBP24.86■■□□□ 1.57
PABPN1-207ENST00000556821 LARSQ9P2J5 1176 aaKnown RBP24.86■■□□□ 1.57
PABPN1-207ENST00000556821 CACNG4Q9UBN1 327 aa24.86■■□□□ 1.57
PABPN1-207ENST00000556821 STK17AQ9UEE5 414 aa24.86■■□□□ 1.57
PABPN1-207ENST00000556821 A0A087X0B3 334 aa24.85■■□□□ 1.57
PABPN1-207ENST00000556821 PDIA4P13667 645 aaKnown RBP24.85■■□□□ 1.57
PABPN1-207ENST00000556821 DDIT3P35638 169 aa24.85■■□□□ 1.57
PABPN1-207ENST00000556821 OR1G1P47890 313 aa24.85■■□□□ 1.57
PABPN1-207ENST00000556821 SMAD4Q13485 552 aaKnown RBP24.85■■□□□ 1.57
PABPN1-207ENST00000556821 NAB2Q15742 525 aa24.85■■□□□ 1.57
PABPN1-207ENST00000556821 ZNF568Q3ZCX4 644 aa24.85■■□□□ 1.57
PABPN1-207ENST00000556821 RNF168Q8IYW5 571 aaPredicted RBP24.85■■□□□ 1.57
PABPN1-207ENST00000556821 KCNN1Q92952 543 aa24.85■■□□□ 1.57
PABPN1-207ENST00000556821 ZNF396Q96N95 335 aaPredicted RBP24.85■■□□□ 1.57
PABPN1-207ENST00000556821 CCDC39Q9UFE4 941 aa24.85■■□□□ 1.57
PABPN1-207ENST00000556821 GDAQ9Y2T3 454 aa24.85■■□□□ 1.57
PABPN1-207ENST00000556821 IRAK3Q9Y616 596 aa24.85■■□□□ 1.57
PABPN1-207ENST00000556821 GFRA3O60609 400 aa24.84■■□□□ 1.57
PABPN1-207ENST00000556821 SMTNP53814 917 aa24.84■■□□□ 1.57
PABPN1-207ENST00000556821 KCNG1Q9UIX4 513 aa24.84■■□□□ 1.57
PABPN1-207ENST00000556821 CD207Q9UJ71 328 aa24.84■■□□□ 1.57
PABPN1-207ENST00000556821 SPTLC2O15270 562 aa24.83■■□□□ 1.57
PABPN1-207ENST00000556821 PPP6R2O75170 966 aa24.83■■□□□ 1.57
PABPN1-207ENST00000556821 FAM13AO94988 1023 aa24.83■■□□□ 1.57
PABPN1-207ENST00000556821 YEATS4O95619 227 aa24.83■■□□□ 1.57
PABPN1-207ENST00000556821 TXLNAP40222 546 aa24.83■■□□□ 1.57
PABPN1-207ENST00000556821 COASYQ13057 564 aa24.83■■□□□ 1.57
PABPN1-207ENST00000556821 PTPN14Q15678 1187 aa24.83■■□□□ 1.57
PABPN1-207ENST00000556821 TMEM184AQ6ZMB5 413 aa24.83■■□□□ 1.57
PABPN1-207ENST00000556821 HAUS6Q7Z4H7 955 aa24.83■■□□□ 1.57
PABPN1-207ENST00000556821 ZBTB45Q96K62 511 aaPredicted RBP24.83■■□□□ 1.57
PABPN1-207ENST00000556821 FIZ1Q96SL8 496 aa24.83■■□□□ 1.57
PABPN1-207ENST00000556821 PAAF1Q9BRP4 392 aa24.83■■□□□ 1.57
PABPN1-207ENST00000556821 PARVGQ9HBI0 331 aa24.83■■□□□ 1.57
PABPN1-207ENST00000556821 DAXXQ9UER7 740 aaPredicted RBP24.83■■□□□ 1.57
PABPN1-207ENST00000556821 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms