RNA–Protein interactions for RNA: ENST00000554117.1

PNN-203, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2

Gene PNN, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-203ENST00000554117 DDX19AQ9NUU7 478 aaKnown RBP11.85□□□□□ -0.51
PNN-203ENST00000554117 KIAA1024Q9UPX6 916 aa11.85□□□□□ -0.51
PNN-203ENST00000554117 C2CD4DB7Z1M9 353 aa11.84□□□□□ -0.51
PNN-203ENST00000554117 ACKR2O00590 384 aa11.84□□□□□ -0.51
PNN-203ENST00000554117 SPATA31C1P0DKV0 1188 aa11.84□□□□□ -0.51
PNN-203ENST00000554117 NUBP1P53384 320 aa11.84□□□□□ -0.51
PNN-203ENST00000554117 SMTNP53814 917 aa11.84□□□□□ -0.51
PNN-203ENST00000554117 DSG1Q02413 1049 aa11.84□□□□□ -0.51
PNN-203ENST00000554117 DSC1Q08554 894 aa11.84□□□□□ -0.51
PNN-203ENST00000554117 STRN3Q13033 797 aa11.84□□□□□ -0.51
PNN-203ENST00000554117 CDR2LQ86X02 465 aaPredicted RBP11.84□□□□□ -0.51
PNN-203ENST00000554117 GPR65Q8IYL9 337 aa11.84□□□□□ -0.51
PNN-203ENST00000554117 TCHPQ9BT92 498 aa11.84□□□□□ -0.51
PNN-203ENST00000554117 TIPINQ9BVW5 301 aa11.84□□□□□ -0.51
PNN-203ENST00000554117 CCDC94Q9BW85 323 aaPredicted RBP11.84□□□□□ -0.51
PNN-203ENST00000554117 BHMT2Q9H2M3 363 aa11.84□□□□□ -0.51
PNN-203ENST00000554117 GPRC5CQ9NQ84 441 aa11.84□□□□□ -0.51
PNN-203ENST00000554117 KLK14Q9P0G3 267 aa11.84□□□□□ -0.51
PNN-203ENST00000554117 FBXL21Q9UKT6 434 aa11.84□□□□□ -0.51
PNN-203ENST00000554117 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.84□□□□□ -0.51
PNN-203ENST00000554117 CCDC195A0A1B0GUA6 201 aa11.83□□□□□ -0.52
PNN-203ENST00000554117 H0YCG3 227 aa11.83□□□□□ -0.52
PNN-203ENST00000554117 B4GALT5O43286 388 aa11.83□□□□□ -0.52
PNN-203ENST00000554117 SEC24BO95487 1268 aa11.83□□□□□ -0.52
PNN-203ENST00000554117 WEE2P0C1S8 567 aa11.83□□□□□ -0.52
PNN-203ENST00000554117 PRPHP41219 470 aa11.83□□□□□ -0.52
PNN-203ENST00000554117 MATR3P43243 847 aaKnown RBP eCLIP11.83□□□□□ -0.52
PNN-203ENST00000554117 PTGDRQ13258 359 aa11.83□□□□□ -0.52
PNN-203ENST00000554117 ZRSR1Q15695 479 aaKnown RBP11.83□□□□□ -0.52
PNN-203ENST00000554117 AMHR2Q16671 573 aa11.83□□□□□ -0.52
PNN-203ENST00000554117 ATF7IP2Q5U623 682 aa11.83□□□□□ -0.52
PNN-203ENST00000554117 CEP57Q86XR8 500 aa11.83□□□□□ -0.52
PNN-203ENST00000554117 PALB2Q86YC2 1186 aa11.83□□□□□ -0.52
PNN-203ENST00000554117 KCTD17Q8N5Z5 321 aa11.83□□□□□ -0.52
PNN-203ENST00000554117 CMASQ8NFW8 434 aaPredicted RBP11.83□□□□□ -0.52
PNN-203ENST00000554117 RASSF8Q8NHQ8 419 aa11.83□□□□□ -0.52
PNN-203ENST00000554117 BCL7CQ8WUZ0 217 aaPredicted RBP11.83□□□□□ -0.52
PNN-203ENST00000554117 RIN2Q8WYP3 895 aaPredicted RBP11.83□□□□□ -0.52
PNN-203ENST00000554117 SMG7Q92540 1137 aaKnown RBP11.83□□□□□ -0.52
PNN-203ENST00000554117 UROC1Q96N76 676 aa11.83□□□□□ -0.52
PNN-203ENST00000554117 RNF39Q9H2S5 420 aa11.83□□□□□ -0.52
PNN-203ENST00000554117 FZD8Q9H461 694 aa11.83□□□□□ -0.52
PNN-203ENST00000554117 C17orf75Q9HAS0 396 aa11.83□□□□□ -0.52
PNN-203ENST00000554117 KMT5AQ9NQR1 393 aa11.83□□□□□ -0.52
PNN-203ENST00000554117 SLC38A7Q9NVC3 462 aa11.83□□□□□ -0.52
PNN-203ENST00000554117 SNTG2Q9NY99 539 aa11.83□□□□□ -0.52
PNN-203ENST00000554117 FNIP2Q9P278 1114 aa11.83□□□□□ -0.52
PNN-203ENST00000554117 IGSF9Q9P2J2 1179 aa11.83□□□□□ -0.52
PNN-203ENST00000554117 GDAQ9Y2T3 454 aa11.83□□□□□ -0.52
PNN-203ENST00000554117 RBM19Q9Y4C8 960 aaKnown RBP11.83□□□□□ -0.52
PNN-203ENST00000554117 DENND4CQ5VZ89 1909 aa11.82□□□□□ -0.52
PNN-203ENST00000554117 A0A087WWV3 80 aa11.82□□□□□ -0.52
PNN-203ENST00000554117 STK25O00506 426 aa11.82□□□□□ -0.52
PNN-203ENST00000554117 TEX28O15482 410 aa11.82□□□□□ -0.52
PNN-203ENST00000554117 RECQL4O94761 1208 aa11.82□□□□□ -0.52
PNN-203ENST00000554117 U2AF2P26368 475 aaKnown RBP eCLIP11.82□□□□□ -0.52
PNN-203ENST00000554117 AFF1P51825 1210 aaKnown RBP11.82□□□□□ -0.52
PNN-203ENST00000554117 NHLH1Q02575 133 aa11.82□□□□□ -0.52
PNN-203ENST00000554117 TDGQ13569 410 aa11.82□□□□□ -0.52
PNN-203ENST00000554117 FAM171A1Q5VUB5 890 aa11.82□□□□□ -0.52
PNN-203ENST00000554117 ALYREFQ86V81 257 aaKnown RBP11.82□□□□□ -0.52
PNN-203ENST00000554117 GLYCTKQ8IVS8 523 aa11.82□□□□□ -0.52
PNN-203ENST00000554117 NXPE3Q969Y0 559 aa11.82□□□□□ -0.52
PNN-203ENST00000554117 TTPALQ9BTX7 342 aa11.82□□□□□ -0.52
PNN-203ENST00000554117 MRPL4Q9BYD3 311 aaKnown RBP11.82□□□□□ -0.52
PNN-203ENST00000554117 PDZD7Q9H5P4 517 aa11.82□□□□□ -0.52
PNN-203ENST00000554117 RXFP1Q9HBX9 757 aa11.82□□□□□ -0.52
PNN-203ENST00000554117 MARCH5Q9NX47 278 aa11.82□□□□□ -0.52
PNN-203ENST00000554117 ZDHHC7Q9NXF8 308 aa11.82□□□□□ -0.52
PNN-203ENST00000554117 LIMD1Q9UGP4 676 aa11.82□□□□□ -0.52
PNN-203ENST00000554117 SMC3Q9UQE7 1217 aa11.82□□□□□ -0.52
PNN-203ENST00000554117 CLUHO75153 1309 aa11.82□□□□□ -0.52
PNN-203ENST00000554117 TRIOO75962 3097 aa11.81□□□□□ -0.52
PNN-203ENST00000554117 NUP210Q8TEM1 1887 aaPredicted RBP11.81□□□□□ -0.52
PNN-203ENST00000554117 CASTOR2A6NHX0 329 aa11.81□□□□□ -0.52
PNN-203ENST00000554117 WNT7AO00755 349 aa11.81□□□□□ -0.52
PNN-203ENST00000554117 XYLBO75191 536 aa11.81□□□□□ -0.52
PNN-203ENST00000554117 MRE11P49959 708 aa11.81□□□□□ -0.52
PNN-203ENST00000554117 PEX3P56589 373 aa11.81□□□□□ -0.52
PNN-203ENST00000554117 PSMD5Q16401 504 aa11.81□□□□□ -0.52
PNN-203ENST00000554117 ZNF568Q3ZCX4 644 aa11.81□□□□□ -0.52
PNN-203ENST00000554117 PPM1LQ5SGD2 360 aa11.81□□□□□ -0.52
PNN-203ENST00000554117 KIAA0319Q5VV43 1072 aa11.81□□□□□ -0.52
PNN-203ENST00000554117 IGSF22Q8N9C0 903 aa11.81□□□□□ -0.52
PNN-203ENST00000554117 CALML4Q96GE6 196 aa11.81□□□□□ -0.52
PNN-203ENST00000554117 VN1R3Q9BXE9 311 aa11.81□□□□□ -0.52
PNN-203ENST00000554117 RHOBTB2Q9BYZ6 727 aa11.81□□□□□ -0.52
PNN-203ENST00000554117 CHST7Q9NS84 486 aa11.81□□□□□ -0.52
PNN-203ENST00000554117 MIOSQ9NXC5 875 aa11.81□□□□□ -0.52
PNN-203ENST00000554117 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.81□□□□□ -0.52
PNN-203ENST00000554117 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.81□□□□□ -0.52
PNN-203ENST00000554117 ZFP37Q9Y6Q3 630 aaPredicted RBP11.81□□□□□ -0.52
PNN-203ENST00000554117 PATJQ8NI35 1801 aa11.81□□□□□ -0.52
PNN-203ENST00000554117 TICRRQ7Z2Z1 1910 aa11.8□□□□□ -0.52
PNN-203ENST00000554117 MYH10P35580 1976 aa11.8□□□□□ -0.52
PNN-203ENST00000554117 B4GALT3O60512 393 aa11.8□□□□□ -0.52
PNN-203ENST00000554117 LILRB3O75022 631 aa11.8□□□□□ -0.52
PNN-203ENST00000554117 BMP15O95972 392 aa11.8□□□□□ -0.52
PNN-203ENST00000554117 AVPR2P30518 371 aa11.8□□□□□ -0.52
PNN-203ENST00000554117 ELF1P32519 619 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms