RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 ZC3H11AO75152 810 aaKnown RBP eCLIP19.56■□□□□ 0.72
TSFM-208ENST00000543727 FGF18O76093 207 aa19.56■□□□□ 0.72
TSFM-208ENST00000543727 AKAP5P24588 427 aa19.56■□□□□ 0.72
TSFM-208ENST00000543727 BCAR1P56945 870 aa19.56■□□□□ 0.72
TSFM-208ENST00000543727 POU5F1Q01860 360 aaKnown RBP19.56■□□□□ 0.72
TSFM-208ENST00000543727 EHHADHQ08426 723 aa19.56■□□□□ 0.72
TSFM-208ENST00000543727 DSC1Q08554 894 aa19.56■□□□□ 0.72
TSFM-208ENST00000543727 TMEM87AQ8NBN3 555 aa19.56■□□□□ 0.72
TSFM-208ENST00000543727 MAFAQ8NHW3 353 aaPredicted RBP19.56■□□□□ 0.72
TSFM-208ENST00000543727 PAGE5Q96GU1 130 aa19.56■□□□□ 0.72
TSFM-208ENST00000543727 TSPAN18Q96SJ8 248 aa19.56■□□□□ 0.72
TSFM-208ENST00000543727 NRDE2Q9H7Z3 1164 aa19.56■□□□□ 0.72
TSFM-208ENST00000543727 SNTG2Q9NY99 539 aa19.56■□□□□ 0.72
TSFM-208ENST00000543727 PUF60Q9UHX1 559 aaKnown RBP19.56■□□□□ 0.72
TSFM-208ENST00000543727 USP20Q9Y2K6 914 aa19.56■□□□□ 0.72
TSFM-208ENST00000543727 STYXL1Q9Y6J8 313 aa19.56■□□□□ 0.72
TSFM-208ENST00000543727 PRRC2BQ5JSZ5 2229 aaKnown RBP19.56■□□□□ 0.72
TSFM-208ENST00000543727 ANK1P16157 1881 aa19.56■□□□□ 0.72
TSFM-208ENST00000543727 RFXAPO00287 272 aa19.55■□□□□ 0.72
TSFM-208ENST00000543727 ZNF202O95125 648 aa19.55■□□□□ 0.72
TSFM-208ENST00000543727 ITGB1P05556 798 aa19.55■□□□□ 0.72
TSFM-208ENST00000543727 AFMP43652 599 aa19.55■□□□□ 0.72
TSFM-208ENST00000543727 POSTNQ15063 836 aa19.55■□□□□ 0.72
TSFM-208ENST00000543727 FAM26FQ5R3K3 315 aa19.55■□□□□ 0.72
TSFM-208ENST00000543727 SLC39A11Q8N1S5 342 aa19.55■□□□□ 0.72
TSFM-208ENST00000543727 GSTCDQ8NEC7 633 aa19.55■□□□□ 0.72
TSFM-208ENST00000543727 SPPL3Q8TCT6 385 aa19.55■□□□□ 0.72
TSFM-208ENST00000543727 ZFP42Q96MM3 310 aa19.55■□□□□ 0.72
TSFM-208ENST00000543727 ACAP3Q96P50 834 aa19.55■□□□□ 0.72
TSFM-208ENST00000543727 IPO9Q96P70 1041 aaKnown RBP19.55■□□□□ 0.72
TSFM-208ENST00000543727 PLEKHA5Q9HAU0 1116 aa19.55■□□□□ 0.72
TSFM-208ENST00000543727 A0A0B4J269 797 aa19.54■□□□□ 0.72
TSFM-208ENST00000543727 FSD2A1L4K1 749 aa19.54■□□□□ 0.72
TSFM-208ENST00000543727 OGTO15294 1046 aa19.54■□□□□ 0.72
TSFM-208ENST00000543727 POMCP01189 267 aa19.54■□□□□ 0.72
TSFM-208ENST00000543727 ALDH2P05091 517 aa19.54■□□□□ 0.72
TSFM-208ENST00000543727 THP07101 528 aa19.54■□□□□ 0.72
TSFM-208ENST00000543727 GALTP07902 379 aa19.54■□□□□ 0.72
TSFM-208ENST00000543727 MATR3P43243 847 aaKnown RBP eCLIP19.54■□□□□ 0.72
TSFM-208ENST00000543727 SCNN1GP51170 649 aa19.54■□□□□ 0.72
TSFM-208ENST00000543727 FAM160A1Q05DH4 1040 aa19.54■□□□□ 0.72
TSFM-208ENST00000543727 PSMD2Q13200 908 aa19.54■□□□□ 0.72
TSFM-208ENST00000543727 ZC2HC1CQ53FD0 456 aaPredicted RBP19.54■□□□□ 0.72
TSFM-208ENST00000543727 XKR4Q5GH76 650 aa19.54■□□□□ 0.72
TSFM-208ENST00000543727 KRBA2Q6ZNG9 492 aa19.54■□□□□ 0.72
TSFM-208ENST00000543727 COLGALT2Q8IYK4 626 aa19.54■□□□□ 0.72
TSFM-208ENST00000543727 PPP2R3CQ969Q6 453 aa19.54■□□□□ 0.72
TSFM-208ENST00000543727 CCDC47Q96A33 483 aaKnown RBP19.54■□□□□ 0.72
TSFM-208ENST00000543727 TMEM169Q96HH4 297 aa19.54■□□□□ 0.72
TSFM-208ENST00000543727 GOLPH3LQ9H4A5 285 aa19.54■□□□□ 0.72
TSFM-208ENST00000543727 HCSTQ9UBK5 93 aa19.54■□□□□ 0.72
TSFM-208ENST00000543727 GDAQ9Y2T3 454 aa19.54■□□□□ 0.72
TSFM-208ENST00000543727 KIAA0391O15091 583 aaKnown RBP19.53■□□□□ 0.72
TSFM-208ENST00000543727 GRM6O15303 877 aa19.53■□□□□ 0.72
TSFM-208ENST00000543727 CLTAP09496 248 aa19.53■□□□□ 0.72
TSFM-208ENST00000543727 SNRPFP62306 86 aaKnown RBP19.53■□□□□ 0.72
TSFM-208ENST00000543727 TUSC3Q13454 348 aa19.53■□□□□ 0.72
TSFM-208ENST00000543727 CUL4BQ13620 913 aa19.53■□□□□ 0.72
TSFM-208ENST00000543727 HSP90AA2PQ14568 343 aaPredicted RBP19.53■□□□□ 0.72
TSFM-208ENST00000543727 BMS1Q14692 1282 aaKnown RBP19.53■□□□□ 0.72
TSFM-208ENST00000543727 ALKAL1Q6UXT8 129 aa19.53■□□□□ 0.72
TSFM-208ENST00000543727 ZBTB33Q86T24 672 aa19.53■□□□□ 0.72
TSFM-208ENST00000543727 FMR1NBQ8N0W7 255 aaPredicted RBP19.53■□□□□ 0.72
TSFM-208ENST00000543727 IGSF21Q96ID5 467 aa19.53■□□□□ 0.72
TSFM-208ENST00000543727 ZBTB45Q96K62 511 aaPredicted RBP19.53■□□□□ 0.72
TSFM-208ENST00000543727 SNX27Q96L92 541 aa19.53■□□□□ 0.72
TSFM-208ENST00000543727 TIGD1Q96MW7 591 aa19.53■□□□□ 0.72
TSFM-208ENST00000543727 TLR9Q9NR96 1032 aa19.53■□□□□ 0.72
TSFM-208ENST00000543727 SLC38A7Q9NVC3 462 aa19.53■□□□□ 0.72
TSFM-208ENST00000543727 TBC1D7Q9P0N9 293 aa19.53■□□□□ 0.72
TSFM-208ENST00000543727 CNTN3Q9P232 1028 aa19.53■□□□□ 0.72
TSFM-208ENST00000543727 HOOK1Q9UJC3 728 aaKnown RBP19.53■□□□□ 0.72
TSFM-208ENST00000543727 PTGESO14684 152 aa19.52■□□□□ 0.72
TSFM-208ENST00000543727 DDHD2O94830 711 aa19.52■□□□□ 0.72
TSFM-208ENST00000543727 KCNE1P15382 129 aa19.52■□□□□ 0.72
TSFM-208ENST00000543727 GARTP22102 1010 aa19.52■□□□□ 0.72
TSFM-208ENST00000543727 AFF1P51825 1210 aaKnown RBP19.52■□□□□ 0.72
TSFM-208ENST00000543727 CASP5P51878 434 aa19.52■□□□□ 0.72
TSFM-208ENST00000543727 SLC39A4Q6P5W5 647 aa19.52■□□□□ 0.72
TSFM-208ENST00000543727 ZNF280BQ86YH2 543 aa19.52■□□□□ 0.72
TSFM-208ENST00000543727 CD302Q8IX05 232 aa19.52■□□□□ 0.72
TSFM-208ENST00000543727 ELOA2Q8IYF1 753 aaPredicted RBP19.52■□□□□ 0.72
TSFM-208ENST00000543727 SYCP3Q8IZU3 236 aa19.52■□□□□ 0.72
TSFM-208ENST00000543727 POF1BQ8WVV4 589 aa19.52■□□□□ 0.72
TSFM-208ENST00000543727 UROC1Q96N76 676 aa19.52■□□□□ 0.72
TSFM-208ENST00000543727 MSTO1Q9BUK6 570 aa19.52■□□□□ 0.72
TSFM-208ENST00000543727 GBP3Q9H0R5 595 aa19.52■□□□□ 0.72
TSFM-208ENST00000543727 BLZF1Q9H2G9 400 aa19.52■□□□□ 0.72
TSFM-208ENST00000543727 NSUN3Q9H649 340 aaKnown RBP19.52■□□□□ 0.72
TSFM-208ENST00000543727 ALG13Q9NP73 1137 aaKnown RBP19.52■□□□□ 0.72
TSFM-208ENST00000543727 EXOC1Q9NV70 894 aa19.52■□□□□ 0.72
TSFM-208ENST00000543727 KLK14Q9P0G3 267 aa19.52■□□□□ 0.72
TSFM-208ENST00000543727 DNAJB4Q9UDY4 337 aa19.52■□□□□ 0.72
TSFM-208ENST00000543727 FAN1Q9Y2M0 1017 aa19.52■□□□□ 0.72
TSFM-208ENST00000543727 NCK2O43639 380 aa19.51■□□□□ 0.71
TSFM-208ENST00000543727 FAM189A1O60320 539 aa19.51■□□□□ 0.71
TSFM-208ENST00000543727 MYBP10242 640 aa19.51■□□□□ 0.71
TSFM-208ENST00000543727 SLC11A1P49279 550 aa19.51■□□□□ 0.71
TSFM-208ENST00000543727 BMT2Q1RMZ1 405 aa19.51■□□□□ 0.71
TSFM-208ENST00000543727 CLEC17AQ6ZS10 378 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms