RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 USP15Q9Y4E8 981 aaPredicted RBP7.41□□□□□ -1.22
CCDC7-209ENST00000539197 MRPL42Q9Y6G3 142 aaKnown RBP7.41□□□□□ -1.22
CCDC7-209ENST00000539197 GASTP01350 101 aa7.4□□□□□ -1.22
CCDC7-209ENST00000539197 DDX6P26196 483 aaKnown RBP eCLIP7.4□□□□□ -1.22
CCDC7-209ENST00000539197 CD38P28907 300 aa7.4□□□□□ -1.22
CCDC7-209ENST00000539197 C21orf58P58505 322 aa7.4□□□□□ -1.22
CCDC7-209ENST00000539197 BMT2Q1RMZ1 405 aa7.4□□□□□ -1.22
CCDC7-209ENST00000539197 ERCC6LQ2NKX8 1250 aa7.4□□□□□ -1.22
CCDC7-209ENST00000539197 FAM102AQ5T9C2 384 aaPredicted RBP7.4□□□□□ -1.22
CCDC7-209ENST00000539197 PDZD4Q76G19 769 aaPredicted RBP7.4□□□□□ -1.22
CCDC7-209ENST00000539197 FBXO18Q8NFZ0 1043 aa7.4□□□□□ -1.22
CCDC7-209ENST00000539197 LEO1Q8WVC0 666 aaPredicted RBP7.4□□□□□ -1.22
CCDC7-209ENST00000539197 ASB10Q8WXI3 467 aa7.4□□□□□ -1.22
CCDC7-209ENST00000539197 LINC00476Q8WZB0 136 aa7.4□□□□□ -1.22
CCDC7-209ENST00000539197 EAF2Q96CJ1 260 aaPredicted RBP7.4□□□□□ -1.22
CCDC7-209ENST00000539197 DRC1Q96MC2 740 aa7.4□□□□□ -1.22
CCDC7-209ENST00000539197 R3HDMLQ9H3Y0 253 aa7.4□□□□□ -1.22
CCDC7-209ENST00000539197 ADARB2Q9NS39 739 aaKnown RBP7.4□□□□□ -1.22
CCDC7-209ENST00000539197 PIPSLA2A3N6 862 aa7.39□□□□□ -1.23
CCDC7-209ENST00000539197 TYRP1P17643 537 aa7.39□□□□□ -1.23
CCDC7-209ENST00000539197 BLOC1S1P78537 153 aa7.39□□□□□ -1.23
CCDC7-209ENST00000539197 ABHD17BQ5VST6 288 aa7.39□□□□□ -1.23
CCDC7-209ENST00000539197 UBXN4Q92575 508 aa7.39□□□□□ -1.23
CCDC7-209ENST00000539197 PHACTR3Q96KR7 559 aa7.39□□□□□ -1.23
CCDC7-209ENST00000539197 NOC2LQ9Y3T9 749 aaKnown RBP7.39□□□□□ -1.23
CCDC7-209ENST00000539197 GSG1L2A8MUP6 293 aa7.38□□□□□ -1.23
CCDC7-209ENST00000539197 CDC45O75419 566 aa7.38□□□□□ -1.23
CCDC7-209ENST00000539197 SPDEFO95238 335 aa7.38□□□□□ -1.23
CCDC7-209ENST00000539197 ID4P47928 161 aa7.38□□□□□ -1.23
CCDC7-209ENST00000539197 CHN2P52757 468 aa7.38□□□□□ -1.23
CCDC7-209ENST00000539197 SEC24CP53992 1094 aa7.38□□□□□ -1.23
CCDC7-209ENST00000539197 MXRA7P84157 204 aa7.38□□□□□ -1.23
CCDC7-209ENST00000539197 JAZF1Q86VZ6 243 aa7.38□□□□□ -1.23
CCDC7-209ENST00000539197 ZFP28Q8NHY6 868 aa7.38□□□□□ -1.23
CCDC7-209ENST00000539197 PAWRQ96IZ0 340 aaKnown RBP7.38□□□□□ -1.23
CCDC7-209ENST00000539197 TOPORSQ9NS56 1045 aaPredicted RBP7.38□□□□□ -1.23
CCDC7-209ENST00000539197 INSL6Q9Y581 213 aa7.38□□□□□ -1.23
CCDC7-209ENST00000539197 COX11Q9Y6N1 276 aa7.38□□□□□ -1.23
CCDC7-209ENST00000539197 FPGT-TNNI3KV9GXZ4 949 aa7.38□□□□□ -1.23
CCDC7-209ENST00000539197 A0A087X0B3 334 aa7.37□□□□□ -1.23
CCDC7-209ENST00000539197 ZNF37AP17032 561 aaPredicted RBP7.37□□□□□ -1.23
CCDC7-209ENST00000539197 RESTQ13127 1097 aa7.37□□□□□ -1.23
CCDC7-209ENST00000539197 ATP13A4Q4VNC1 1196 aa7.37□□□□□ -1.23
CCDC7-209ENST00000539197 RD3Q7Z3Z2 195 aa7.37□□□□□ -1.23
CCDC7-209ENST00000539197 RASSF3Q86WH2 238 aa7.37□□□□□ -1.23
CCDC7-209ENST00000539197 MFSD3Q96ES6 412 aa7.37□□□□□ -1.23
CCDC7-209ENST00000539197 SALL3Q9BXA9 1300 aa7.36□□□□□ -1.23
CCDC7-209ENST00000539197 DRGXA6NNA5 263 aa7.36□□□□□ -1.23
CCDC7-209ENST00000539197 MARCH11A6NNE9 402 aa7.36□□□□□ -1.23
CCDC7-209ENST00000539197 CCT2P78371 535 aaKnown RBP7.36□□□□□ -1.23
CCDC7-209ENST00000539197 PRR16Q569H4 304 aa7.36□□□□□ -1.23
CCDC7-209ENST00000539197 ARMC6Q6NXE6 501 aa7.36□□□□□ -1.23
CCDC7-209ENST00000539197 ZNF480Q8WV37 535 aa7.36□□□□□ -1.23
CCDC7-209ENST00000539197 PNPLA7Q6ZV29 1317 aa7.35□□□□□ -1.23
CCDC7-209ENST00000539197 ELANEP08246 267 aa7.35□□□□□ -1.23
CCDC7-209ENST00000539197 ADSLP30566 484 aaPredicted RBP7.35□□□□□ -1.23
CCDC7-209ENST00000539197 CRHR1P34998 444 aa7.35□□□□□ -1.23
CCDC7-209ENST00000539197 CDK17Q00537 523 aa7.35□□□□□ -1.23
CCDC7-209ENST00000539197 CMIPQ8IY22 773 aa7.35□□□□□ -1.23
CCDC7-209ENST00000539197 FEZ1Q99689 392 aa7.35□□□□□ -1.23
CCDC7-209ENST00000539197 RNF181Q9P0P0 153 aa7.35□□□□□ -1.23
CCDC7-209ENST00000539197 DPP7Q9UHL4 492 aa7.35□□□□□ -1.23
CCDC7-209ENST00000539197 PLAAQ9Y263 795 aa7.35□□□□□ -1.23
CCDC7-209ENST00000539197 SPATA31A6Q5VVP1 1343 aa7.34□□□□□ -1.23
CCDC7-209ENST00000539197 RPTORQ8N122 1335 aa7.34□□□□□ -1.23
CCDC7-209ENST00000539197 CXorf49A8MYA2 514 aaPredicted RBP7.34□□□□□ -1.23
CCDC7-209ENST00000539197 CXCR5P32302 372 aa7.34□□□□□ -1.23
CCDC7-209ENST00000539197 PTPN7P35236 360 aa7.34□□□□□ -1.23
CCDC7-209ENST00000539197 FLT3LGP49771 235 aa7.34□□□□□ -1.23
CCDC7-209ENST00000539197 SCAPQ12770 1279 aa7.34□□□□□ -1.23
CCDC7-209ENST00000539197 FBXO42Q6P3S6 717 aa7.34□□□□□ -1.23
CCDC7-209ENST00000539197 CLRN3Q8NCR9 226 aa7.34□□□□□ -1.23
CCDC7-209ENST00000539197 ATP11BQ9Y2G3 1177 aa7.34□□□□□ -1.23
CCDC7-209ENST00000539197 POLR2AP24928 1970 aaKnown RBP7.33□□□□□ -1.24
CCDC7-209ENST00000539197 CCDC78A2IDD5 438 aa7.33□□□□□ -1.24
CCDC7-209ENST00000539197 NEMP1O14524 444 aa7.33□□□□□ -1.24
CCDC7-209ENST00000539197 PJA2O43164 708 aa7.33□□□□□ -1.24
CCDC7-209ENST00000539197 PDE8AO60658 829 aa7.33□□□□□ -1.24
CCDC7-209ENST00000539197 PHF2O75151 1096 aa7.33□□□□□ -1.24
CCDC7-209ENST00000539197 ESRRBO95718 433 aa7.33□□□□□ -1.24
CCDC7-209ENST00000539197 EGR2P11161 476 aaPredicted RBP7.33□□□□□ -1.24
CCDC7-209ENST00000539197 ITGAMP11215 1152 aa7.33□□□□□ -1.24
CCDC7-209ENST00000539197 BPIP17213 487 aa7.33□□□□□ -1.24
CCDC7-209ENST00000539197 UGT8Q16880 541 aa7.33□□□□□ -1.24
CCDC7-209ENST00000539197 COLEC12Q5KU26 742 aa7.33□□□□□ -1.24
CCDC7-209ENST00000539197 ZKSCAN2Q63HK3 967 aa7.33□□□□□ -1.24
CCDC7-209ENST00000539197 Q6ZVL8 140 aa7.33□□□□□ -1.24
CCDC7-209ENST00000539197 KIAA0907Q7Z7F0 614 aaPredicted RBP7.33□□□□□ -1.24
CCDC7-209ENST00000539197 SLC44A3Q8N4M1 653 aa7.33□□□□□ -1.24
CCDC7-209ENST00000539197 SLC9A6Q92581 669 aa7.33□□□□□ -1.24
CCDC7-209ENST00000539197 ZSWIM1Q9BR11 485 aa7.33□□□□□ -1.24
CCDC7-209ENST00000539197 ALG13Q9NP73 1137 aaKnown RBP7.33□□□□□ -1.24
CCDC7-209ENST00000539197 FOSP01100 380 aaPredicted RBP7.32□□□□□ -1.24
CCDC7-209ENST00000539197 CFIP05156 583 aa7.32□□□□□ -1.24
CCDC7-209ENST00000539197 MYCLP1P12525 358 aaPredicted RBP7.32□□□□□ -1.24
CCDC7-209ENST00000539197 CLRN1P58418 232 aa7.32□□□□□ -1.24
CCDC7-209ENST00000539197 RAP2BP61225 183 aa7.32□□□□□ -1.24
CCDC7-209ENST00000539197 MPP3Q13368 585 aa7.32□□□□□ -1.24
CCDC7-209ENST00000539197 MST1LQ2TV78 715 aa7.32□□□□□ -1.24
CCDC7-209ENST00000539197 FAM47AQ5JRC9 791 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms