RNA–Protein interactions for RNA: ENST00000509384.5

LYSMD3-204, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 1,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-204ENST00000509384 NLRC4Q9NPP4 1024 aa13.68□□□□□ -0.22
LYSMD3-204ENST00000509384 GTF2IRD1Q9UHL9 959 aa13.68□□□□□ -0.22
LYSMD3-204ENST00000509384 PTCH2Q9Y6C5 1203 aa13.68□□□□□ -0.22
LYSMD3-204ENST00000509384 TSPAN1O60635 241 aa13.67□□□□□ -0.22
LYSMD3-204ENST00000509384 EEF1DP3Q658K8 133 aa13.67□□□□□ -0.22
LYSMD3-204ENST00000509384 KRT39Q6A163 491 aa13.67□□□□□ -0.22
LYSMD3-204ENST00000509384 CCSAPQ6IQ19 270 aaPredicted RBP13.67□□□□□ -0.22
LYSMD3-204ENST00000509384 DPY19L2P1Q6NXN4 242 aa13.67□□□□□ -0.22
LYSMD3-204ENST00000509384 BRSK2Q8IWQ3 736 aa13.67□□□□□ -0.22
LYSMD3-204ENST00000509384 ZNF710Q8N1W2 664 aa13.67□□□□□ -0.22
LYSMD3-204ENST00000509384 MYRIPQ8NFW9 859 aa13.67□□□□□ -0.22
LYSMD3-204ENST00000509384 POP1Q99575 1024 aaKnown RBP13.67□□□□□ -0.22
LYSMD3-204ENST00000509384 OSMRQ99650 979 aa13.67□□□□□ -0.22
LYSMD3-204ENST00000509384 CDT1Q9H211 546 aa13.67□□□□□ -0.22
LYSMD3-204ENST00000509384 SIX2Q9NPC8 291 aa13.67□□□□□ -0.22
LYSMD3-204ENST00000509384 TOPORSQ9NS56 1045 aaPredicted RBP13.67□□□□□ -0.22
LYSMD3-204ENST00000509384 FBXL5Q9UKA1 691 aa13.67□□□□□ -0.22
LYSMD3-204ENST00000509384 PLAGL2Q9UPG8 496 aa13.67□□□□□ -0.22
LYSMD3-204ENST00000509384 FHOD1Q9Y613 1164 aa13.67□□□□□ -0.22
LYSMD3-204ENST00000509384 CCP110O43303 1012 aa13.66□□□□□ -0.22
LYSMD3-204ENST00000509384 FAM189A1O60320 539 aa13.66□□□□□ -0.22
LYSMD3-204ENST00000509384 CABYRO75952 493 aa13.66□□□□□ -0.22
LYSMD3-204ENST00000509384 MCF2P10911 925 aa13.66□□□□□ -0.22
LYSMD3-204ENST00000509384 DARSP14868 501 aaKnown RBP13.66□□□□□ -0.22
LYSMD3-204ENST00000509384 ARF4P18085 180 aaPredicted RBP13.66□□□□□ -0.22
LYSMD3-204ENST00000509384 HNRNPH3P31942 346 aaKnown RBP13.66□□□□□ -0.22
LYSMD3-204ENST00000509384 GTF2F1P35269 517 aaKnown RBP eCLIP13.66□□□□□ -0.22
LYSMD3-204ENST00000509384 EPC2Q52LR7 807 aa13.66□□□□□ -0.22
LYSMD3-204ENST00000509384 SEZ6Q53EL9 994 aa13.66□□□□□ -0.22
LYSMD3-204ENST00000509384 E4F1Q66K89 784 aaPredicted RBP13.66□□□□□ -0.22
LYSMD3-204ENST00000509384 GDF6Q6KF10 455 aaPredicted RBP13.66□□□□□ -0.22
LYSMD3-204ENST00000509384 WDR59Q6PJI9 974 aa13.66□□□□□ -0.22
LYSMD3-204ENST00000509384 RAD9BQ6WBX8 426 aa13.66□□□□□ -0.22
LYSMD3-204ENST00000509384 CDR2LQ86X02 465 aaPredicted RBP13.66□□□□□ -0.22
LYSMD3-204ENST00000509384 NME8Q8N427 588 aa13.66□□□□□ -0.22
LYSMD3-204ENST00000509384 EHBP1Q8NDI1 1231 aa13.66□□□□□ -0.22
LYSMD3-204ENST00000509384 CPB2Q96IY4 423 aa13.66□□□□□ -0.22
LYSMD3-204ENST00000509384 SPAG5Q96R06 1193 aa13.66□□□□□ -0.22
LYSMD3-204ENST00000509384 CGRRF1Q99675 332 aa13.66□□□□□ -0.22
LYSMD3-204ENST00000509384 PDZD7Q9H5P4 517 aa13.66□□□□□ -0.22
LYSMD3-204ENST00000509384 PDE11AQ9HCR9 933 aa13.66□□□□□ -0.22
LYSMD3-204ENST00000509384 KCND1Q9NSA2 647 aa13.66□□□□□ -0.22
LYSMD3-204ENST00000509384 DAAM1Q9Y4D1 1078 aa13.66□□□□□ -0.22
LYSMD3-204ENST00000509384 HTTP42858 3142 aa13.65□□□□□ -0.22
LYSMD3-204ENST00000509384 UQCRHLA0A096LP55 91 aa13.65□□□□□ -0.22
LYSMD3-204ENST00000509384 UQCRHP07919 91 aa13.65□□□□□ -0.22
LYSMD3-204ENST00000509384 TNNI1P19237 187 aa13.65□□□□□ -0.22
LYSMD3-204ENST00000509384 FGFR4P22455 802 aa13.65□□□□□ -0.22
LYSMD3-204ENST00000509384 RFX1P22670 979 aa13.65□□□□□ -0.22
LYSMD3-204ENST00000509384 TNFSF9P41273 254 aa13.65□□□□□ -0.22
LYSMD3-204ENST00000509384 CDK17Q00537 523 aa13.65□□□□□ -0.22
LYSMD3-204ENST00000509384 NCBP1Q09161 790 aaKnown RBP13.65□□□□□ -0.22
LYSMD3-204ENST00000509384 RAPGEF1Q13905 1077 aa13.65□□□□□ -0.22
LYSMD3-204ENST00000509384 MTF1Q14872 753 aa13.65□□□□□ -0.22
LYSMD3-204ENST00000509384 PCBP1Q15365 356 aaKnown RBP eCLIP13.65□□□□□ -0.22
LYSMD3-204ENST00000509384 SFMBT2Q5VUG0 894 aa13.65□□□□□ -0.22
LYSMD3-204ENST00000509384 TOGARAM2Q6ZUX3 1019 aa13.65□□□□□ -0.22
LYSMD3-204ENST00000509384 CATSPER4Q7RTX7 472 aa13.65□□□□□ -0.22
LYSMD3-204ENST00000509384 RSPH3Q86UC2 560 aa13.65□□□□□ -0.22
LYSMD3-204ENST00000509384 SESTD1Q86VW0 696 aa13.65□□□□□ -0.22
LYSMD3-204ENST00000509384 THNSL1Q8IYQ7 743 aa13.65□□□□□ -0.22
LYSMD3-204ENST00000509384 CCAR2Q8N163 923 aaKnown RBP13.65□□□□□ -0.22
LYSMD3-204ENST00000509384 SYN2Q92777 582 aaPredicted RBP13.65□□□□□ -0.22
LYSMD3-204ENST00000509384 CHP1Q99653 195 aa13.65□□□□□ -0.22
LYSMD3-204ENST00000509384 ADPGKQ9BRR6 497 aa13.65□□□□□ -0.22
LYSMD3-204ENST00000509384 TRMT1Q9NXH9 659 aaKnown RBP13.65□□□□□ -0.22
LYSMD3-204ENST00000509384 APEX2Q9UBZ4 518 aa13.65□□□□□ -0.22
LYSMD3-204ENST00000509384 CPSF3Q9UKF6 684 aaKnown RBP13.65□□□□□ -0.22
LYSMD3-204ENST00000509384 MOXD2PA6NHM9 499 aa13.64□□□□□ -0.23
LYSMD3-204ENST00000509384 M0QZ92 97 aa13.64□□□□□ -0.23
LYSMD3-204ENST00000509384 EIF4BP23588 611 aaKnown RBP13.64□□□□□ -0.23
LYSMD3-204ENST00000509384 ACLYP53396 1101 aa13.64□□□□□ -0.23
LYSMD3-204ENST00000509384 CRYBB1P53674 252 aaPredicted RBP13.64□□□□□ -0.23
LYSMD3-204ENST00000509384 WNT7BP56706 349 aa13.64□□□□□ -0.23
LYSMD3-204ENST00000509384 CLDN10P78369 228 aa13.64□□□□□ -0.23
LYSMD3-204ENST00000509384 LMBRD2Q68DH5 695 aaPredicted RBP13.64□□□□□ -0.23
LYSMD3-204ENST00000509384 IQCEQ6IPM2 695 aa13.64□□□□□ -0.23
LYSMD3-204ENST00000509384 GJB7Q6PEY0 223 aa13.64□□□□□ -0.23
LYSMD3-204ENST00000509384 SV2AQ7L0J3 742 aa13.64□□□□□ -0.23
LYSMD3-204ENST00000509384 APBB1IPQ7Z5R6 666 aaPredicted RBP13.64□□□□□ -0.23
LYSMD3-204ENST00000509384 TNS4Q8IZW8 715 aa13.64□□□□□ -0.23
LYSMD3-204ENST00000509384 FBXL13Q8NEE6 735 aa13.64□□□□□ -0.23
LYSMD3-204ENST00000509384 LMO3Q8TAP4 145 aa13.64□□□□□ -0.23
LYSMD3-204ENST00000509384 VTI1AQ96AJ9 217 aa13.64□□□□□ -0.23
LYSMD3-204ENST00000509384 CDHR5Q9HBB8 845 aa13.64□□□□□ -0.23
LYSMD3-204ENST00000509384 MYO6Q9UM54 1294 aa13.64□□□□□ -0.23
LYSMD3-204ENST00000509384 USP27XA6NNY8 438 aa13.64□□□□□ -0.23
LYSMD3-204ENST00000509384 ZSCAN12O43309 604 aa13.64□□□□□ -0.23
LYSMD3-204ENST00000509384 RPLP2P05387 115 aaKnown RBP13.64□□□□□ -0.23
LYSMD3-204ENST00000509384 CYLC1P35663 651 aaPredicted RBP13.64□□□□□ -0.23
LYSMD3-204ENST00000509384 OSTNP61366 133 aa13.64□□□□□ -0.23
LYSMD3-204ENST00000509384 SNX17Q15036 470 aa13.64□□□□□ -0.23
LYSMD3-204ENST00000509384 SURF1Q15526 300 aa13.64□□□□□ -0.23
LYSMD3-204ENST00000509384 ASIC2Q16515 512 aa13.64□□□□□ -0.23
LYSMD3-204ENST00000509384 KYAT1Q16773 422 aa13.64□□□□□ -0.23
LYSMD3-204ENST00000509384 DCAF4L1Q3SXM0 396 aa13.64□□□□□ -0.23
LYSMD3-204ENST00000509384 LHX8Q68G74 356 aa13.64□□□□□ -0.23
LYSMD3-204ENST00000509384 SERINC5Q86VE9 423 aa13.64□□□□□ -0.23
LYSMD3-204ENST00000509384 GPIHBP1Q8IV16 184 aa13.64□□□□□ -0.23
LYSMD3-204ENST00000509384 WDR49Q8IV35 697 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms