RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 TMEM161BQ8NDZ6 487 aa8.39□□□□□ -1.07
CDC42-205ENST00000498236 CCDC112Q8NEF3 446 aa8.39□□□□□ -1.07
CDC42-205ENST00000498236 NPLOC4Q8TAT6 608 aa8.39□□□□□ -1.07
CDC42-205ENST00000498236 SLC7A3Q8WY07 619 aa8.39□□□□□ -1.07
CDC42-205ENST00000498236 ACCSQ96QU6 501 aa8.39□□□□□ -1.07
CDC42-205ENST00000498236 ERGIC2Q96RQ1 377 aa8.39□□□□□ -1.07
CDC42-205ENST00000498236 CFHR5Q9BXR6 569 aa8.39□□□□□ -1.07
CDC42-205ENST00000498236 RBCK1Q9BYM8 510 aa8.39□□□□□ -1.07
CDC42-205ENST00000498236 GBP3Q9H0R5 595 aa8.39□□□□□ -1.07
CDC42-205ENST00000498236 VPS16Q9H269 839 aa8.39□□□□□ -1.07
CDC42-205ENST00000498236 SMARCAD1Q9H4L7 1026 aa8.39□□□□□ -1.07
CDC42-205ENST00000498236 METTL14Q9HCE5 456 aaKnown RBP8.39□□□□□ -1.07
CDC42-205ENST00000498236 XPNPEP1Q9NQW7 623 aa8.39□□□□□ -1.07
CDC42-205ENST00000498236 PDGFCQ9NRA1 345 aa8.39□□□□□ -1.07
CDC42-205ENST00000498236 DMAC2Q9NW81 257 aa8.39□□□□□ -1.07
CDC42-205ENST00000498236 TAB2Q9NYJ8 693 aa8.39□□□□□ -1.07
CDC42-205ENST00000498236 GJD2Q9UKL4 321 aa8.39□□□□□ -1.07
CDC42-205ENST00000498236 FAM184BQ9ULE4 1060 aa8.39□□□□□ -1.07
CDC42-205ENST00000498236 GPC6Q9Y625 555 aaPredicted RBP8.39□□□□□ -1.07
CDC42-205ENST00000498236 IGKV6-21A0A0C4DH24 114 aa8.38□□□□□ -1.07
CDC42-205ENST00000498236 K7ENM7 598 aa8.38□□□□□ -1.07
CDC42-205ENST00000498236 MAPK13O15264 365 aa8.38□□□□□ -1.07
CDC42-205ENST00000498236 NRDCO43847 1150 aa8.38□□□□□ -1.07
CDC42-205ENST00000498236 FZD6O60353 706 aa8.38□□□□□ -1.07
CDC42-205ENST00000498236 MAFO75444 373 aaPredicted RBP8.38□□□□□ -1.07
CDC42-205ENST00000498236 XRCC5P13010 732 aaKnown RBP8.38□□□□□ -1.07
CDC42-205ENST00000498236 MSNP26038 577 aaKnown RBP8.38□□□□□ -1.07
CDC42-205ENST00000498236 ARL2P36404 184 aa8.38□□□□□ -1.07
CDC42-205ENST00000498236 MTIF2P46199 727 aaKnown RBP8.38□□□□□ -1.07
CDC42-205ENST00000498236 NPTX2P47972 431 aa8.38□□□□□ -1.07
CDC42-205ENST00000498236 POLGP54098 1239 aaPredicted RBP8.38□□□□□ -1.07
CDC42-205ENST00000498236 UBXN1Q04323 297 aa8.38□□□□□ -1.07
CDC42-205ENST00000498236 PPP2R5AQ15172 486 aa8.38□□□□□ -1.07
CDC42-205ENST00000498236 VWA3BQ502W6 1294 aa8.38□□□□□ -1.07
CDC42-205ENST00000498236 ZC2HC1CQ53FD0 456 aaPredicted RBP8.38□□□□□ -1.07
CDC42-205ENST00000498236 FIGNQ5HY92 759 aa8.38□□□□□ -1.07
CDC42-205ENST00000498236 FKBP15Q5T1M5 1219 aa8.38□□□□□ -1.07
CDC42-205ENST00000498236 NPAS4Q8IUM7 802 aa8.38□□□□□ -1.07
CDC42-205ENST00000498236 MAP4K3Q8IVH8 894 aa8.38□□□□□ -1.07
CDC42-205ENST00000498236 ETFBKMTQ8IXQ9 262 aa8.38□□□□□ -1.07
CDC42-205ENST00000498236 RGL4Q8IZJ4 473 aa8.38□□□□□ -1.07
CDC42-205ENST00000498236 KIAA1524Q8TCG1 905 aa8.38□□□□□ -1.07
CDC42-205ENST00000498236 GLG1Q92896 1179 aa8.38□□□□□ -1.07
CDC42-205ENST00000498236 CCDC51Q96ER9 411 aa8.38□□□□□ -1.07
CDC42-205ENST00000498236 PANX2Q96RD6 677 aa8.38□□□□□ -1.07
CDC42-205ENST00000498236 CITED4Q96RK1 184 aa8.38□□□□□ -1.07
CDC42-205ENST00000498236 APBA2Q99767 749 aa8.38□□□□□ -1.07
CDC42-205ENST00000498236 JPH2Q9BR39 696 aaPredicted RBP8.38□□□□□ -1.07
CDC42-205ENST00000498236 NOC4LQ9BVI4 516 aaKnown RBP8.38□□□□□ -1.07
CDC42-205ENST00000498236 NUP58Q9BVL2 599 aa8.38□□□□□ -1.07
CDC42-205ENST00000498236 TMX1Q9H3N1 280 aa8.38□□□□□ -1.07
CDC42-205ENST00000498236 NDST4Q9H3R1 872 aa8.38□□□□□ -1.07
CDC42-205ENST00000498236 POLD4Q9HCU8 107 aa8.38□□□□□ -1.07
CDC42-205ENST00000498236 GPRC5CQ9NQ84 441 aa8.38□□□□□ -1.07
CDC42-205ENST00000498236 AGPAT3Q9NRZ7 376 aa8.38□□□□□ -1.07
CDC42-205ENST00000498236 KCND1Q9NSA2 647 aa8.38□□□□□ -1.07
CDC42-205ENST00000498236 ERAP1Q9NZ08 941 aa8.38□□□□□ -1.07
CDC42-205ENST00000498236 EXOC7Q9UPT5 735 aa8.38□□□□□ -1.07
CDC42-205ENST00000498236 MCM3APO60318 1980 aa8.38□□□□□ -1.07
CDC42-205ENST00000498236 MYH9P35579 1960 aaKnown RBP8.38□□□□□ -1.07
CDC42-205ENST00000498236 PHLPP2Q6ZVD8 1323 aa8.37□□□□□ -1.07
CDC42-205ENST00000498236 FIGNL2A6NMB9 653 aa8.37□□□□□ -1.07
CDC42-205ENST00000498236 ZBTB42B2RXF5 422 aa8.37□□□□□ -1.07
CDC42-205ENST00000498236 AKR1B15C9JRZ8 316 aaPredicted RBP8.37□□□□□ -1.07
CDC42-205ENST00000498236 HBP1O60381 514 aa8.37□□□□□ -1.07
CDC42-205ENST00000498236 SORBS3O60504 671 aa8.37□□□□□ -1.07
CDC42-205ENST00000498236 TPM1P09493 284 aa8.37□□□□□ -1.07
CDC42-205ENST00000498236 RHOQP17081 205 aa8.37□□□□□ -1.07
CDC42-205ENST00000498236 PSMC2P35998 433 aaKnown RBP8.37□□□□□ -1.07
CDC42-205ENST00000498236 ADCYAP1R1P41586 468 aa8.37□□□□□ -1.07
CDC42-205ENST00000498236 NAMPTP43490 491 aa8.37□□□□□ -1.07
CDC42-205ENST00000498236 PEX3P56589 373 aa8.37□□□□□ -1.07
CDC42-205ENST00000498236 CCZ1BP86790 482 aa8.37□□□□□ -1.07
CDC42-205ENST00000498236 CCZ1P86791 482 aaPredicted RBP8.37□□□□□ -1.07
CDC42-205ENST00000498236 ENPEPQ07075 957 aa8.37□□□□□ -1.07
CDC42-205ENST00000498236 TBC1D8BQ0IIM8 1120 aa8.37□□□□□ -1.07
CDC42-205ENST00000498236 LRMPQ12912 555 aa8.37□□□□□ -1.07
CDC42-205ENST00000498236 PLCB4Q15147 1175 aa8.37□□□□□ -1.07
CDC42-205ENST00000498236 MTERF2Q49AM1 385 aa8.37□□□□□ -1.07
CDC42-205ENST00000498236 CCDC40Q4G0X9 1142 aa8.37□□□□□ -1.07
CDC42-205ENST00000498236 BRDTQ58F21 947 aaPredicted RBP8.37□□□□□ -1.07
CDC42-205ENST00000498236 FAM26DQ5JW98 314 aa8.37□□□□□ -1.07
CDC42-205ENST00000498236 MAEAQ7L5Y9 396 aa8.37□□□□□ -1.07
CDC42-205ENST00000498236 PPFIBP1Q86W92 1011 aa8.37□□□□□ -1.07
CDC42-205ENST00000498236 CNGA4Q8IV77 575 aa8.37□□□□□ -1.07
CDC42-205ENST00000498236 TC2NQ8N9U0 490 aa8.37□□□□□ -1.07
CDC42-205ENST00000498236 BSNDQ8WZ55 320 aa8.37□□□□□ -1.07
CDC42-205ENST00000498236 COPS5Q92905 334 aa8.37□□□□□ -1.07
CDC42-205ENST00000498236 EEF2KMTQ96G04 330 aa8.37□□□□□ -1.07
CDC42-205ENST00000498236 BORCS6Q96GS4 357 aa8.37□□□□□ -1.07
CDC42-205ENST00000498236 IFT74Q96LB3 600 aa8.37□□□□□ -1.07
CDC42-205ENST00000498236 ZNF830Q96NB3 372 aaPredicted RBP8.37□□□□□ -1.07
CDC42-205ENST00000498236 ZIC5Q96T25 663 aa8.37□□□□□ -1.07
CDC42-205ENST00000498236 SH2D3AQ9BRG2 576 aa8.37□□□□□ -1.07
CDC42-205ENST00000498236 POLR3FQ9H1D9 316 aaPredicted RBP8.37□□□□□ -1.07
CDC42-205ENST00000498236 TIMMDC1Q9NPL8 285 aa8.37□□□□□ -1.07
CDC42-205ENST00000498236 KMT5AQ9NQR1 393 aa8.37□□□□□ -1.07
CDC42-205ENST00000498236 ARHGAP28Q9P2N2 729 aa8.37□□□□□ -1.07
CDC42-205ENST00000498236 ARMCX3Q9UH62 379 aaPredicted RBP8.37□□□□□ -1.07
CDC42-205ENST00000498236 TBX20Q9UMR3 447 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms