RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 CEP120Q8N960 986 aa15.42■□□□□ 0.06
VTI1A-206ENST00000489142 TARS2Q9BW92 718 aaKnown RBP15.42■□□□□ 0.06
VTI1A-206ENST00000489142 COLEC11Q9BWP8 271 aa15.42■□□□□ 0.06
VTI1A-206ENST00000489142 GPR62Q9BZJ7 368 aa15.42■□□□□ 0.06
VTI1A-206ENST00000489142 NT5C3AQ9H0P0 336 aa15.42■□□□□ 0.06
VTI1A-206ENST00000489142 CITO14578 2027 aa15.41■□□□□ 0.06
VTI1A-206ENST00000489142 VWA8A3KMH1 1905 aa15.41■□□□□ 0.06
VTI1A-206ENST00000489142 SPDYE4A6NLX3 237 aa15.41■□□□□ 0.06
VTI1A-206ENST00000489142 LOC730098B7Z3J9 87 aa15.41■□□□□ 0.06
VTI1A-206ENST00000489142 LILRB3O75022 631 aa15.41■□□□□ 0.06
VTI1A-206ENST00000489142 NR1I2O75469 434 aa15.41■□□□□ 0.06
VTI1A-206ENST00000489142 EFEMP2O95967 443 aa15.41■□□□□ 0.06
VTI1A-206ENST00000489142 HARSP12081 509 aaKnown RBP15.41■□□□□ 0.06
VTI1A-206ENST00000489142 ALADP13716 330 aa15.41■□□□□ 0.06
VTI1A-206ENST00000489142 HOXB8P17481 243 aaPredicted RBP15.41■□□□□ 0.06
VTI1A-206ENST00000489142 SYT1P21579 422 aa15.41■□□□□ 0.06
VTI1A-206ENST00000489142 IGFBP6P24592 240 aaPredicted RBP15.41■□□□□ 0.06
VTI1A-206ENST00000489142 GLUD2P49448 558 aa15.41■□□□□ 0.06
VTI1A-206ENST00000489142 CLCN4P51793 760 aa15.41■□□□□ 0.06
VTI1A-206ENST00000489142 RESTQ13127 1097 aa15.41■□□□□ 0.06
VTI1A-206ENST00000489142 HSP90AA2PQ14568 343 aaPredicted RBP15.41■□□□□ 0.06
VTI1A-206ENST00000489142 KARSQ15046 597 aaKnown RBP15.41■□□□□ 0.06
VTI1A-206ENST00000489142 DCAF4L1Q3SXM0 396 aa15.41■□□□□ 0.06
VTI1A-206ENST00000489142 TPRNQ4KMQ1 711 aa15.41■□□□□ 0.06
VTI1A-206ENST00000489142 FUT10Q6P4F1 479 aa15.41■□□□□ 0.06
VTI1A-206ENST00000489142 TMC5Q6UXY8 1006 aa15.41■□□□□ 0.06
VTI1A-206ENST00000489142 RNF168Q8IYW5 571 aaPredicted RBP15.41■□□□□ 0.06
VTI1A-206ENST00000489142 SYT2Q8N9I0 419 aaPredicted RBP15.41■□□□□ 0.06
VTI1A-206ENST00000489142 RASSF8Q8NHQ8 419 aa15.41■□□□□ 0.06
VTI1A-206ENST00000489142 ACO2Q99798 780 aaKnown RBP15.41■□□□□ 0.06
VTI1A-206ENST00000489142 EMILIN2Q9BXX0 1053 aa15.41■□□□□ 0.06
VTI1A-206ENST00000489142 CDT1Q9H211 546 aa15.41■□□□□ 0.06
VTI1A-206ENST00000489142 POMKQ9H5K3 350 aa15.41■□□□□ 0.06
VTI1A-206ENST00000489142 ARHGAP28Q9P2N2 729 aa15.41■□□□□ 0.06
VTI1A-206ENST00000489142 DENND4AQ7Z401 1863 aa15.4■□□□□ 0.06
VTI1A-206ENST00000489142 ZMYM2Q9UBW7 1377 aa15.4■□□□□ 0.06
VTI1A-206ENST00000489142 TEX28O15482 410 aa15.4■□□□□ 0.06
VTI1A-206ENST00000489142 GPR37L1O60883 481 aa15.4■□□□□ 0.06
VTI1A-206ENST00000489142 KIF4AO95239 1232 aa15.4■□□□□ 0.06
VTI1A-206ENST00000489142 THP07101 528 aa15.4■□□□□ 0.06
VTI1A-206ENST00000489142 SPATA31D3P0C874 917 aa15.4■□□□□ 0.06
VTI1A-206ENST00000489142 RPL17P18621 184 aaKnown RBP15.4■□□□□ 0.06
VTI1A-206ENST00000489142 PLCG1P19174 1290 aa15.4■□□□□ 0.06
VTI1A-206ENST00000489142 GUCY2CP25092 1073 aa15.4■□□□□ 0.06
VTI1A-206ENST00000489142 MARCKSP29966 332 aaPredicted RBP15.4■□□□□ 0.06
VTI1A-206ENST00000489142 UBA7P41226 1012 aa15.4■□□□□ 0.06
VTI1A-206ENST00000489142 CEBPZQ03701 1054 aaKnown RBP15.4■□□□□ 0.06
VTI1A-206ENST00000489142 TUSC3Q13454 348 aa15.4■□□□□ 0.06
VTI1A-206ENST00000489142 ZNF568Q3ZCX4 644 aa15.4■□□□□ 0.06
VTI1A-206ENST00000489142 ARSHQ5FYA8 562 aa15.4■□□□□ 0.06
VTI1A-206ENST00000489142 KIAA0319Q5VV43 1072 aa15.4■□□□□ 0.06
VTI1A-206ENST00000489142 KIAA1841Q6NSI8 718 aa15.4■□□□□ 0.06
VTI1A-206ENST00000489142 CES5AQ6NT32 575 aa15.4■□□□□ 0.06
VTI1A-206ENST00000489142 SPATA31D4Q6ZUB0 917 aa15.4■□□□□ 0.06
VTI1A-206ENST00000489142 CALML4Q96GE6 196 aa15.4■□□□□ 0.06
VTI1A-206ENST00000489142 ZBTB45Q96K62 511 aaPredicted RBP15.4■□□□□ 0.06
VTI1A-206ENST00000489142 ADAM7Q9H2U9 754 aa15.4■□□□□ 0.06
VTI1A-206ENST00000489142 TMEM134Q9H6X4 195 aa15.4■□□□□ 0.06
VTI1A-206ENST00000489142 DZANK1Q9NVP4 752 aa15.4■□□□□ 0.06
VTI1A-206ENST00000489142 ADAM28Q9UKQ2 775 aa15.4■□□□□ 0.06
VTI1A-206ENST00000489142 PDCD11Q14690 1871 aaKnown RBP15.4■□□□□ 0.06
VTI1A-206ENST00000489142 K7ELQ4 463 aaPredicted RBP15.39■□□□□ 0.05
VTI1A-206ENST00000489142 TADA2AO75478 443 aa15.39■□□□□ 0.05
VTI1A-206ENST00000489142 PLS3P13797 630 aa15.39■□□□□ 0.05
VTI1A-206ENST00000489142 PDCP20941 246 aa15.39■□□□□ 0.05
VTI1A-206ENST00000489142 DSG1Q02413 1049 aa15.39■□□□□ 0.05
VTI1A-206ENST00000489142 MCM6Q14566 821 aa15.39■□□□□ 0.05
VTI1A-206ENST00000489142 NAB2Q15742 525 aa15.39■□□□□ 0.05
VTI1A-206ENST00000489142 RTP2Q5QGT7 225 aa15.39■□□□□ 0.05
VTI1A-206ENST00000489142 PRSS55Q6UWB4 352 aaPredicted RBP15.39■□□□□ 0.05
VTI1A-206ENST00000489142 USP49Q70CQ1 688 aa15.39■□□□□ 0.05
VTI1A-206ENST00000489142 GPBP1Q86WP2 473 aa15.39■□□□□ 0.05
VTI1A-206ENST00000489142 RIN2Q8WYP3 895 aaPredicted RBP15.39■□□□□ 0.05
VTI1A-206ENST00000489142 AK8Q96MA6 479 aa15.39■□□□□ 0.05
VTI1A-206ENST00000489142 FBXL18Q96ME1 805 aa15.39■□□□□ 0.05
VTI1A-206ENST00000489142 MRPL4Q9BYD3 311 aaKnown RBP15.39■□□□□ 0.05
VTI1A-206ENST00000489142 GOLGA2P5Q9HBQ8 144 aa15.39■□□□□ 0.05
VTI1A-206ENST00000489142 PTPRHQ9HD43 1115 aa15.39■□□□□ 0.05
VTI1A-206ENST00000489142 MAN1C1Q9NR34 630 aa15.39■□□□□ 0.05
VTI1A-206ENST00000489142 BLOC1S4Q9NUP1 217 aa15.39■□□□□ 0.05
VTI1A-206ENST00000489142 ANKFY1Q9P2R3 1169 aa15.39■□□□□ 0.05
VTI1A-206ENST00000489142 STK39Q9UEW8 545 aa15.39■□□□□ 0.05
VTI1A-206ENST00000489142 TNFSF13BQ9Y275 285 aa15.39■□□□□ 0.05
VTI1A-206ENST00000489142 MTCL1Q9Y4B5 1905 aaKnown RBP15.39■□□□□ 0.05
VTI1A-206ENST00000489142 ABLIM1O14639 778 aa15.38■□□□□ 0.05
VTI1A-206ENST00000489142 BMP15O95972 392 aa15.38■□□□□ 0.05
VTI1A-206ENST00000489142 LONP1P36776 959 aaKnown RBP15.38■□□□□ 0.05
VTI1A-206ENST00000489142 ITIH3Q06033 890 aa15.38■□□□□ 0.05
VTI1A-206ENST00000489142 PTPAQ15257 358 aa15.38■□□□□ 0.05
VTI1A-206ENST00000489142 SEZ6Q53EL9 994 aa15.38■□□□□ 0.05
VTI1A-206ENST00000489142 HERC4Q5GLZ8 1057 aaPredicted RBP15.38■□□□□ 0.05
VTI1A-206ENST00000489142 PPFIBP1Q86W92 1011 aa15.38■□□□□ 0.05
VTI1A-206ENST00000489142 CEP57Q86XR8 500 aa15.38■□□□□ 0.05
VTI1A-206ENST00000489142 PALB2Q86YC2 1186 aa15.38■□□□□ 0.05
VTI1A-206ENST00000489142 TMEM161BQ8NDZ6 487 aa15.38■□□□□ 0.05
VTI1A-206ENST00000489142 EPSTI1Q96J88 318 aa15.38■□□□□ 0.05
VTI1A-206ENST00000489142 CLIC6Q96NY7 704 aa15.38■□□□□ 0.05
VTI1A-206ENST00000489142 REEP2Q9BRK0 252 aa15.38■□□□□ 0.05
VTI1A-206ENST00000489142 TCHPQ9BT92 498 aa15.38■□□□□ 0.05
VTI1A-206ENST00000489142 TIPINQ9BVW5 301 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms