RNA–Protein interactions for RNA: ENST00000486021.5

CPNE1-226, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-226ENST00000486021 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.22□□□□□ -1.09
CPNE1-226ENST00000486021 ZDHHC7Q9NXF8 308 aa8.22□□□□□ -1.09
CPNE1-226ENST00000486021 IGSF9Q9P2J2 1179 aa8.22□□□□□ -1.09
CPNE1-226ENST00000486021 MUTYHQ9UIF7 546 aa8.22□□□□□ -1.09
CPNE1-226ENST00000486021 TNFSF13BQ9Y275 285 aa8.22□□□□□ -1.09
CPNE1-226ENST00000486021 PRG3Q9Y2Y8 225 aaPredicted RBP8.22□□□□□ -1.09
CPNE1-226ENST00000486021 TCHHQ07283 1943 aa8.22□□□□□ -1.09
CPNE1-226ENST00000486021 REV3LO60673 3130 aa8.21□□□□□ -1.09
CPNE1-226ENST00000486021 NCOR1O75376 2440 aa8.21□□□□□ -1.09
CPNE1-226ENST00000486021 TMEM221A6NGB7 291 aa8.21□□□□□ -1.1
CPNE1-226ENST00000486021 H7C4K7 107 aa8.21□□□□□ -1.1
CPNE1-226ENST00000486021 M0R296 226 aa8.21□□□□□ -1.1
CPNE1-226ENST00000486021 C2CD2LO14523 706 aa8.21□□□□□ -1.1
CPNE1-226ENST00000486021 XYLBO75191 536 aa8.21□□□□□ -1.1
CPNE1-226ENST00000486021 SSBP05455 408 aaKnown RBP eCLIP8.21□□□□□ -1.1
CPNE1-226ENST00000486021 KRT18P05783 430 aaKnown RBP8.21□□□□□ -1.1
CPNE1-226ENST00000486021 RFX1P22670 979 aa8.21□□□□□ -1.1
CPNE1-226ENST00000486021 AKAP5P24588 427 aa8.21□□□□□ -1.1
CPNE1-226ENST00000486021 GUCY2CP25092 1073 aa8.21□□□□□ -1.1
CPNE1-226ENST00000486021 ELF1P32519 619 aa8.21□□□□□ -1.1
CPNE1-226ENST00000486021 LONP1P36776 959 aaKnown RBP8.21□□□□□ -1.1
CPNE1-226ENST00000486021 PTPN5P54829 565 aa8.21□□□□□ -1.1
CPNE1-226ENST00000486021 PEX3P56589 373 aa8.21□□□□□ -1.1
CPNE1-226ENST00000486021 ATP2C1P98194 919 aaPredicted RBP8.21□□□□□ -1.1
CPNE1-226ENST00000486021 UVSSAQ2YD98 709 aa8.21□□□□□ -1.1
CPNE1-226ENST00000486021 HYIQ5T013 277 aa8.21□□□□□ -1.1
CPNE1-226ENST00000486021 SYCE2Q6PIF2 218 aa8.21□□□□□ -1.1
CPNE1-226ENST00000486021 DCLRE1AQ6PJP8 1040 aa8.21□□□□□ -1.1
CPNE1-226ENST00000486021 GPR149Q86SP6 731 aa8.21□□□□□ -1.1
CPNE1-226ENST00000486021 SLC22A17Q8WUG5 538 aa8.21□□□□□ -1.1
CPNE1-226ENST00000486021 ACAP3Q96P50 834 aa8.21□□□□□ -1.1
CPNE1-226ENST00000486021 TTPALQ9BTX7 342 aa8.21□□□□□ -1.1
CPNE1-226ENST00000486021 MFSD1Q9H3U5 465 aa8.21□□□□□ -1.1
CPNE1-226ENST00000486021 NXF3Q9H4D5 531 aaKnown RBP8.21□□□□□ -1.1
CPNE1-226ENST00000486021 RXFP1Q9HBX9 757 aa8.21□□□□□ -1.1
CPNE1-226ENST00000486021 CD320Q9NPF0 282 aa8.21□□□□□ -1.1
CPNE1-226ENST00000486021 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.21□□□□□ -1.1
CPNE1-226ENST00000486021 HCSTQ9UBK5 93 aa8.21□□□□□ -1.1
CPNE1-226ENST00000486021 ODF2LQ9ULJ1 636 aa8.21□□□□□ -1.1
CPNE1-226ENST00000486021 PCDHB6Q9Y5E3 794 aa8.21□□□□□ -1.1
CPNE1-226ENST00000486021 MYH15Q9Y2K3 1946 aa8.21□□□□□ -1.1
CPNE1-226ENST00000486021 CCDC195A0A1B0GUA6 201 aa8.2□□□□□ -1.1
CPNE1-226ENST00000486021 VWA3AA6NCI4 1184 aa8.2□□□□□ -1.1
CPNE1-226ENST00000486021 FAM86C2PA6NEL3 165 aa8.2□□□□□ -1.1
CPNE1-226ENST00000486021 TMEM189-UBE2V1I3L0A0 370 aa8.2□□□□□ -1.1
CPNE1-226ENST00000486021 CLDN3O15551 220 aa8.2□□□□□ -1.1
CPNE1-226ENST00000486021 HIP1RO75146 1068 aa8.2□□□□□ -1.1
CPNE1-226ENST00000486021 CNPP09543 421 aaKnown RBP8.2□□□□□ -1.1
CPNE1-226ENST00000486021 HNRNPA1P09651 372 aaKnown RBP eCLIP8.2□□□□□ -1.1
CPNE1-226ENST00000486021 MCF2P10911 925 aa8.2□□□□□ -1.1
CPNE1-226ENST00000486021 HOXA9P31269 272 aa8.2□□□□□ -1.1
CPNE1-226ENST00000486021 RPL9P32969 192 aaKnown RBP8.2□□□□□ -1.1
CPNE1-226ENST00000486021 GRM5P41594 1212 aa8.2□□□□□ -1.1
CPNE1-226ENST00000486021 ZRSR1Q15695 479 aaKnown RBP8.2□□□□□ -1.1
CPNE1-226ENST00000486021 AMHR2Q16671 573 aa8.2□□□□□ -1.1
CPNE1-226ENST00000486021 ZNF568Q3ZCX4 644 aa8.2□□□□□ -1.1
CPNE1-226ENST00000486021 RINT1Q6NUQ1 792 aa8.2□□□□□ -1.1
CPNE1-226ENST00000486021 MPZL3Q6UWV2 235 aa8.2□□□□□ -1.1
CPNE1-226ENST00000486021 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.2□□□□□ -1.1
CPNE1-226ENST00000486021 ANKS3Q6ZW76 656 aa8.2□□□□□ -1.1
CPNE1-226ENST00000486021 CEP57Q86XR8 500 aa8.2□□□□□ -1.1
CPNE1-226ENST00000486021 CD302Q8IX05 232 aa8.2□□□□□ -1.1
CPNE1-226ENST00000486021 ELMOD1Q8N336 334 aa8.2□□□□□ -1.1
CPNE1-226ENST00000486021 FBXL6Q8N531 539 aa8.2□□□□□ -1.1
CPNE1-226ENST00000486021 SYT2Q8N9I0 419 aaPredicted RBP8.2□□□□□ -1.1
CPNE1-226ENST00000486021 KRI1Q8N9T8 703 aaKnown RBP8.2□□□□□ -1.1
CPNE1-226ENST00000486021 SPIRE2Q8WWL2 714 aa8.2□□□□□ -1.1
CPNE1-226ENST00000486021 RIN2Q8WYP3 895 aaPredicted RBP8.2□□□□□ -1.1
CPNE1-226ENST00000486021 BICD1Q96G01 975 aa8.2□□□□□ -1.1
CPNE1-226ENST00000486021 NTPCRQ9BSD7 190 aaKnown RBP8.2□□□□□ -1.1
CPNE1-226ENST00000486021 APOL5Q9BWW9 433 aa8.2□□□□□ -1.1
CPNE1-226ENST00000486021 LRRC27Q9C0I9 530 aa8.2□□□□□ -1.1
CPNE1-226ENST00000486021 PDZD7Q9H5P4 517 aa8.2□□□□□ -1.1
CPNE1-226ENST00000486021 MAN1C1Q9NR34 630 aa8.2□□□□□ -1.1
CPNE1-226ENST00000486021 CHST7Q9NS84 486 aa8.2□□□□□ -1.1
CPNE1-226ENST00000486021 SNTG2Q9NY99 539 aa8.2□□□□□ -1.1
CPNE1-226ENST00000486021 MAFFQ9ULX9 164 aa8.2□□□□□ -1.1
CPNE1-226ENST00000486021 HES2Q9Y543 173 aa8.2□□□□□ -1.1
CPNE1-226ENST00000486021 NUB1Q9Y5A7 615 aa8.2□□□□□ -1.1
CPNE1-226ENST00000486021 PCDHGC5Q9Y5F6 944 aa8.2□□□□□ -1.1
CPNE1-226ENST00000486021 MEIS3P2A8K0S8 358 aa8.19□□□□□ -1.1
CPNE1-226ENST00000486021 E9PMD0 336 aa8.19□□□□□ -1.1
CPNE1-226ENST00000486021 TEX28O15482 410 aa8.19□□□□□ -1.1
CPNE1-226ENST00000486021 B4GALT5O43286 388 aa8.19□□□□□ -1.1
CPNE1-226ENST00000486021 TBCAO75347 108 aaKnown RBP8.19□□□□□ -1.1
CPNE1-226ENST00000486021 TOM1L1O75674 476 aa8.19□□□□□ -1.1
CPNE1-226ENST00000486021 RECQL4O94761 1208 aa8.19□□□□□ -1.1
CPNE1-226ENST00000486021 FAM13AO94988 1023 aa8.19□□□□□ -1.1
CPNE1-226ENST00000486021 PLS3P13797 630 aa8.19□□□□□ -1.1
CPNE1-226ENST00000486021 EPCAMP16422 314 aa8.19□□□□□ -1.1
CPNE1-226ENST00000486021 MARCKSP29966 332 aaPredicted RBP8.19□□□□□ -1.1
CPNE1-226ENST00000486021 GBP2P32456 591 aaPredicted RBP8.19□□□□□ -1.1
CPNE1-226ENST00000486021 NPTX2P47972 431 aa8.19□□□□□ -1.1
CPNE1-226ENST00000486021 ST3GAL1Q11201 340 aa8.19□□□□□ -1.1
CPNE1-226ENST00000486021 PSMD5Q16401 504 aa8.19□□□□□ -1.1
CPNE1-226ENST00000486021 PPM1LQ5SGD2 360 aa8.19□□□□□ -1.1
CPNE1-226ENST00000486021 FAM171A1Q5VUB5 890 aa8.19□□□□□ -1.1
CPNE1-226ENST00000486021 KIAA0319Q5VV43 1072 aa8.19□□□□□ -1.1
CPNE1-226ENST00000486021 TMC5Q6UXY8 1006 aa8.19□□□□□ -1.1
CPNE1-226ENST00000486021 ZPBP2Q6X784 338 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms