RNA–Protein interactions for RNA: ENST00000482236.5

SORT1-204, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-204ENST00000482236 KCTD17Q8N5Z5 321 aa12.32□□□□□ -0.44
SORT1-204ENST00000482236 MYCT1Q8N699 235 aa12.32□□□□□ -0.44
SORT1-204ENST00000482236 RIN2Q8WYP3 895 aaPredicted RBP12.32□□□□□ -0.44
SORT1-204ENST00000482236 FBXL18Q96ME1 805 aa12.32□□□□□ -0.44
SORT1-204ENST00000482236 CCDC113Q9H0I3 377 aa12.32□□□□□ -0.44
SORT1-204ENST00000482236 SFXN1Q9H9B4 322 aa12.32□□□□□ -0.44
SORT1-204ENST00000482236 C17orf75Q9HAS0 396 aa12.32□□□□□ -0.44
SORT1-204ENST00000482236 PIDD1Q9HB75 910 aa12.32□□□□□ -0.44
SORT1-204ENST00000482236 KCND2Q9NZV8 630 aa12.32□□□□□ -0.44
SORT1-204ENST00000482236 MUTYHQ9UIF7 546 aa12.32□□□□□ -0.44
SORT1-204ENST00000482236 ADAM28Q9UKQ2 775 aa12.32□□□□□ -0.44
SORT1-204ENST00000482236 GTF3C3Q9Y5Q9 886 aa12.32□□□□□ -0.44
SORT1-204ENST00000482236 ZMYM2Q9UBW7 1377 aa12.31□□□□□ -0.44
SORT1-204ENST00000482236 SLC26A4O43511 780 aa12.31□□□□□ -0.44
SORT1-204ENST00000482236 B4GALT3O60512 393 aa12.31□□□□□ -0.44
SORT1-204ENST00000482236 WEE2P0C1S8 567 aa12.31□□□□□ -0.44
SORT1-204ENST00000482236 PLCG1P19174 1290 aa12.31□□□□□ -0.44
SORT1-204ENST00000482236 GUCY2CP25092 1073 aa12.31□□□□□ -0.44
SORT1-204ENST00000482236 MARCKSP29966 332 aaPredicted RBP12.31□□□□□ -0.44
SORT1-204ENST00000482236 LIG4P49917 911 aa12.31□□□□□ -0.44
SORT1-204ENST00000482236 ELAVL2Q12926 359 aaKnown RBP12.31□□□□□ -0.44
SORT1-204ENST00000482236 CUL4AQ13619 759 aa12.31□□□□□ -0.44
SORT1-204ENST00000482236 STK38Q15208 465 aa12.31□□□□□ -0.44
SORT1-204ENST00000482236 USP41Q3LFD5 358 aa12.31□□□□□ -0.44
SORT1-204ENST00000482236 LIN9Q5TKA1 542 aa12.31□□□□□ -0.44
SORT1-204ENST00000482236 FOXD4L5Q5VV16 416 aaPredicted RBP12.31□□□□□ -0.44
SORT1-204ENST00000482236 EEF1DP3Q658K8 133 aa12.31□□□□□ -0.44
SORT1-204ENST00000482236 TMC5Q6UXY8 1006 aa12.31□□□□□ -0.44
SORT1-204ENST00000482236 KCNK18Q7Z418 384 aa12.31□□□□□ -0.44
SORT1-204ENST00000482236 RNF135Q8IUD6 432 aa12.31□□□□□ -0.44
SORT1-204ENST00000482236 C12orf76Q8N812 135 aaPredicted RBP12.31□□□□□ -0.44
SORT1-204ENST00000482236 SYT2Q8N9I0 419 aaPredicted RBP12.31□□□□□ -0.44
SORT1-204ENST00000482236 KRI1Q8N9T8 703 aaKnown RBP12.31□□□□□ -0.44
SORT1-204ENST00000482236 TDRD5Q8NAT2 981 aaKnown RBP12.31□□□□□ -0.44
SORT1-204ENST00000482236 FOXD4L4Q8WXT5 416 aaPredicted RBP12.31□□□□□ -0.44
SORT1-204ENST00000482236 MMTAG2Q9BU76 263 aaKnown RBP12.31□□□□□ -0.44
SORT1-204ENST00000482236 TARS2Q9BW92 718 aaKnown RBP12.31□□□□□ -0.44
SORT1-204ENST00000482236 CD320Q9NPF0 282 aa12.31□□□□□ -0.44
SORT1-204ENST00000482236 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.31□□□□□ -0.44
SORT1-204ENST00000482236 SLC38A7Q9NVC3 462 aa12.31□□□□□ -0.44
SORT1-204ENST00000482236 TNFSF13BQ9Y275 285 aa12.31□□□□□ -0.44
SORT1-204ENST00000482236 VCANP13611 3396 aa12.3□□□□□ -0.44
SORT1-204ENST00000482236 NPHP3-ACAD11A0A0J9YXS1 232 aa12.3□□□□□ -0.44
SORT1-204ENST00000482236 HNRNPDLO14979 420 aaKnown RBP12.3□□□□□ -0.44
SORT1-204ENST00000482236 CNPP09543 421 aaKnown RBP12.3□□□□□ -0.44
SORT1-204ENST00000482236 SYT1P21579 422 aa12.3□□□□□ -0.44
SORT1-204ENST00000482236 NOLC1Q14978 699 aaKnown RBP eCLIP12.3□□□□□ -0.44
SORT1-204ENST00000482236 MPZL3Q6UWV2 235 aa12.3□□□□□ -0.44
SORT1-204ENST00000482236 CCDC149Q6ZUS6 474 aa12.3□□□□□ -0.44
SORT1-204ENST00000482236 C1orf186Q6ZWK4 172 aa12.3□□□□□ -0.44
SORT1-204ENST00000482236 PALB2Q86YC2 1186 aa12.3□□□□□ -0.44
SORT1-204ENST00000482236 INTS4Q96HW7 963 aaKnown RBP12.3□□□□□ -0.44
SORT1-204ENST00000482236 B3GALT6Q96L58 329 aa12.3□□□□□ -0.44
SORT1-204ENST00000482236 ZNF396Q96N95 335 aaPredicted RBP12.3□□□□□ -0.44
SORT1-204ENST00000482236 ACAP3Q96P50 834 aa12.3□□□□□ -0.44
SORT1-204ENST00000482236 KLHL5Q96PQ7 755 aa12.3□□□□□ -0.44
SORT1-204ENST00000482236 PNMA5Q96PV4 448 aa12.3□□□□□ -0.44
SORT1-204ENST00000482236 ADAM7Q9H2U9 754 aa12.3□□□□□ -0.44
SORT1-204ENST00000482236 TMEM134Q9H6X4 195 aa12.3□□□□□ -0.44
SORT1-204ENST00000482236 MAN1C1Q9NR34 630 aa12.3□□□□□ -0.44
SORT1-204ENST00000482236 MARCH5Q9NX47 278 aa12.3□□□□□ -0.44
SORT1-204ENST00000482236 MIOSQ9NXC5 875 aa12.3□□□□□ -0.44
SORT1-204ENST00000482236 CACNG4Q9UBN1 327 aa12.3□□□□□ -0.44
SORT1-204ENST00000482236 DAXXQ9UER7 740 aaPredicted RBP12.3□□□□□ -0.44
SORT1-204ENST00000482236 NUB1Q9Y5A7 615 aa12.3□□□□□ -0.44
SORT1-204ENST00000482236 ATG2AQ2TAZ0 1938 aa12.3□□□□□ -0.44
SORT1-204ENST00000482236 TTLL13PA6NNM8 815 aa12.29□□□□□ -0.44
SORT1-204ENST00000482236 F8W810 466 aa12.29□□□□□ -0.44
SORT1-204ENST00000482236 PI4K2BG5E9Z4 385 aa12.29□□□□□ -0.44
SORT1-204ENST00000482236 CLDN3O15551 220 aa12.29□□□□□ -0.44
SORT1-204ENST00000482236 TRAPPC3O43617 180 aa12.29□□□□□ -0.44
SORT1-204ENST00000482236 STX6O43752 255 aa12.29□□□□□ -0.44
SORT1-204ENST00000482236 B3GAT3O94766 335 aa12.29□□□□□ -0.44
SORT1-204ENST00000482236 KIF4AO95239 1232 aa12.29□□□□□ -0.44
SORT1-204ENST00000482236 MCF2P10911 925 aa12.29□□□□□ -0.44
SORT1-204ENST00000482236 DSC1Q08554 894 aa12.29□□□□□ -0.44
SORT1-204ENST00000482236 MCM6Q14566 821 aa12.29□□□□□ -0.44
SORT1-204ENST00000482236 TMEM119Q4V9L6 283 aa12.29□□□□□ -0.44
SORT1-204ENST00000482236 SPECC1Q5M775 1068 aa12.29□□□□□ -0.44
SORT1-204ENST00000482236 NT5DC1Q5TFE4 455 aa12.29□□□□□ -0.44
SORT1-204ENST00000482236 FAM171A1Q5VUB5 890 aa12.29□□□□□ -0.44
SORT1-204ENST00000482236 RRAGBQ5VZM2 374 aa12.29□□□□□ -0.44
SORT1-204ENST00000482236 PDXDC1Q6P996 788 aa12.29□□□□□ -0.44
SORT1-204ENST00000482236 SYCE2Q6PIF2 218 aa12.29□□□□□ -0.44
SORT1-204ENST00000482236 TMEM184AQ6ZMB5 413 aa12.29□□□□□ -0.44
SORT1-204ENST00000482236 SPRYD3Q8NCJ5 442 aa12.29□□□□□ -0.44
SORT1-204ENST00000482236 LARP4BQ92615 738 aaKnown RBP12.29□□□□□ -0.44
SORT1-204ENST00000482236 RAD54LQ92698 747 aa12.29□□□□□ -0.44
SORT1-204ENST00000482236 STAMQ92783 540 aa12.29□□□□□ -0.44
SORT1-204ENST00000482236 ACSF2Q96CM8 615 aaPredicted RBP12.29□□□□□ -0.44
SORT1-204ENST00000482236 FAM212AQ96EL1 285 aa12.29□□□□□ -0.44
SORT1-204ENST00000482236 UROC1Q96N76 676 aa12.29□□□□□ -0.44
SORT1-204ENST00000482236 ACO2Q99798 780 aaKnown RBP12.29□□□□□ -0.44
SORT1-204ENST00000482236 REEP2Q9BRK0 252 aa12.29□□□□□ -0.44
SORT1-204ENST00000482236 TTPALQ9BTX7 342 aa12.29□□□□□ -0.44
SORT1-204ENST00000482236 VN1R3Q9BXE9 311 aa12.29□□□□□ -0.44
SORT1-204ENST00000482236 CDT1Q9H211 546 aa12.29□□□□□ -0.44
SORT1-204ENST00000482236 ZSCAN16Q9H4T2 348 aaPredicted RBP12.29□□□□□ -0.44
SORT1-204ENST00000482236 PARVGQ9HBI0 331 aa12.29□□□□□ -0.44
SORT1-204ENST00000482236 ODF2LQ9ULJ1 636 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms