RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 FDXACB1Q9BRP7 624 aaPredicted RBP6.3□□□□□ -1.4
COPA-203ENST00000481040 MAGEH1Q9H213 219 aa6.3□□□□□ -1.4
COPA-203ENST00000481040 GALNT8Q9NY28 637 aa6.3□□□□□ -1.4
COPA-203ENST00000481040 LMCD1Q9NZU5 365 aa6.3□□□□□ -1.4
COPA-203ENST00000481040 KCMF1Q9P0J7 381 aa6.3□□□□□ -1.4
COPA-203ENST00000481040 ABCF2Q9UG63 623 aa6.3□□□□□ -1.4
COPA-203ENST00000481040 TMEM59LQ9UK28 342 aa6.3□□□□□ -1.4
COPA-203ENST00000481040 VAV3Q9UKW4 847 aa6.3□□□□□ -1.4
COPA-203ENST00000481040 KRTAP4-8A0A0G2JLE6 195 aa6.29□□□□□ -1.4
COPA-203ENST00000481040 GOLGA6L3A6NEY3 463 aa6.29□□□□□ -1.4
COPA-203ENST00000481040 CUTAO60888 179 aa6.29□□□□□ -1.4
COPA-203ENST00000481040 LRG1P02750 347 aa6.29□□□□□ -1.4
COPA-203ENST00000481040 EEF1GP26641 437 aaKnown RBP6.29□□□□□ -1.4
COPA-203ENST00000481040 APEX1P27695 318 aaKnown RBP6.29□□□□□ -1.4
COPA-203ENST00000481040 EIF5P55010 431 aaKnown RBP6.29□□□□□ -1.4
COPA-203ENST00000481040 ARL4CP56559 192 aa6.29□□□□□ -1.4
COPA-203ENST00000481040 MGAT5Q09328 741 aa6.29□□□□□ -1.4
COPA-203ENST00000481040 NFATC3Q12968 1075 aa6.29□□□□□ -1.4
COPA-203ENST00000481040 TARDBPQ13148 414 aaKnown RBP eCLIP6.29□□□□□ -1.4
COPA-203ENST00000481040 G3BP1Q13283 466 aaKnown RBP eCLIP6.29□□□□□ -1.46e-7■□□□□ 10.2
COPA-203ENST00000481040 PRKG1Q13976 671 aa6.29□□□□□ -1.4
COPA-203ENST00000481040 POSTNQ15063 836 aa6.29□□□□□ -1.4
COPA-203ENST00000481040 PFKFB4Q16877 469 aa6.29□□□□□ -1.4
COPA-203ENST00000481040 ZACNQ401N2 412 aa6.29□□□□□ -1.4
COPA-203ENST00000481040 ZNF280DQ6N043 979 aa6.29□□□□□ -1.4
COPA-203ENST00000481040 TXLNBQ8N3L3 684 aa6.29□□□□□ -1.4
COPA-203ENST00000481040 ATG16L2Q8NAA4 619 aa6.29□□□□□ -1.4
COPA-203ENST00000481040 ATP11CQ8NB49 1132 aa6.29□□□□□ -1.4
COPA-203ENST00000481040 HOXB13Q92826 284 aaPredicted RBP6.29□□□□□ -1.4
COPA-203ENST00000481040 SUCLG2Q96I99 432 aa6.29□□□□□ -1.4
COPA-203ENST00000481040 MRGPRX4Q96LA9 322 aa6.29□□□□□ -1.4
COPA-203ENST00000481040 ALPK1Q96QP1 1244 aa6.29□□□□□ -1.4
COPA-203ENST00000481040 STK33Q9BYT3 514 aa6.29□□□□□ -1.4
COPA-203ENST00000481040 PAK6Q9NQU5 681 aaPredicted RBP6.29□□□□□ -1.4
COPA-203ENST00000481040 CNNM1Q9NRU3 951 aa6.29□□□□□ -1.4
COPA-203ENST00000481040 DTLQ9NZJ0 730 aa6.29□□□□□ -1.4
COPA-203ENST00000481040 HSPBP1Q9NZL4 362 aa6.29□□□□□ -1.4
COPA-203ENST00000481040 LRFN1Q9P244 771 aa6.29□□□□□ -1.4
COPA-203ENST00000481040 CRYL1Q9Y2S2 319 aa6.29□□□□□ -1.4
COPA-203ENST00000481040 ZC3H12DA2A288 527 aaKnown RBP6.28□□□□□ -1.4
COPA-203ENST00000481040 ZNF839A8K0R7 811 aa6.28□□□□□ -1.4
COPA-203ENST00000481040 EYA2O00167 538 aa6.28□□□□□ -1.4
COPA-203ENST00000481040 EIF3FO00303 357 aaPredicted RBP6.28□□□□□ -1.4
COPA-203ENST00000481040 SRGAP3O43295 1099 aa6.28□□□□□ -1.4
COPA-203ENST00000481040 AKR1B10O60218 316 aa6.28□□□□□ -1.4
COPA-203ENST00000481040 TMEM127O75204 238 aa6.28□□□□□ -1.4
COPA-203ENST00000481040 ENDOD1O94919 500 aa6.28□□□□□ -1.4
COPA-203ENST00000481040 ZBTB7AO95365 584 aa6.28□□□□□ -1.4
COPA-203ENST00000481040 EFEMP2O95967 443 aa6.28□□□□□ -1.4
COPA-203ENST00000481040 ENO2P09104 434 aaPredicted RBP6.28□□□□□ -1.4
COPA-203ENST00000481040 DBHP09172 617 aa6.28□□□□□ -1.4
COPA-203ENST00000481040 SYN1P17600 705 aa6.28□□□□□ -1.4
COPA-203ENST00000481040 EN2P19622 333 aaPredicted RBP6.28□□□□□ -1.4
COPA-203ENST00000481040 SETQ01105 290 aaPredicted RBP6.28□□□□□ -1.4
COPA-203ENST00000481040 GRM1Q13255 1194 aa6.28□□□□□ -1.4
COPA-203ENST00000481040 CNGB1Q14028 1251 aaPredicted RBP6.28□□□□□ -1.4
COPA-203ENST00000481040 RFX8Q6ZV50 586 aa6.28□□□□□ -1.4
COPA-203ENST00000481040 BMP8AQ7Z5Y6 402 aa6.28□□□□□ -1.4
COPA-203ENST00000481040 RSPH3Q86UC2 560 aa6.28□□□□□ -1.4
COPA-203ENST00000481040 VSIG10LQ86VR7 867 aa6.28□□□□□ -1.4
COPA-203ENST00000481040 FAM129CQ86XR2 697 aa6.28□□□□□ -1.4
COPA-203ENST00000481040 FAM9BQ8IZU0 186 aa6.28□□□□□ -1.4
COPA-203ENST00000481040 MSL3Q8N5Y2 521 aaKnown RBP6.28□□□□□ -1.4
COPA-203ENST00000481040 USP13Q92995 863 aaPredicted RBP6.28□□□□□ -1.4
COPA-203ENST00000481040 TOE1Q96GM8 510 aaKnown RBP6.28□□□□□ -1.4
COPA-203ENST00000481040 MRGPRX1Q96LB2 322 aa6.28□□□□□ -1.4
COPA-203ENST00000481040 ZSCAN31Q96LW9 406 aaPredicted RBP6.28□□□□□ -1.4
COPA-203ENST00000481040 BRIP1Q9BX63 1249 aa6.28□□□□□ -1.4
COPA-203ENST00000481040 BTBD2Q9BX70 525 aa6.28□□□□□ -1.4
COPA-203ENST00000481040 SARS2Q9NP81 518 aaKnown RBP6.28□□□□□ -1.4
COPA-203ENST00000481040 GJB4Q9NTQ9 266 aa6.28□□□□□ -1.4
COPA-203ENST00000481040 DACT1Q9NYF0 836 aa6.28□□□□□ -1.4
COPA-203ENST00000481040 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.28□□□□□ -1.4
COPA-203ENST00000481040 CALCOCO1Q9P1Z2 691 aa6.28□□□□□ -1.4
COPA-203ENST00000481040 MYO1AQ9UBC5 1043 aa6.28□□□□□ -1.4
COPA-203ENST00000481040 FEZ2Q9UHY8 353 aaPredicted RBP6.28□□□□□ -1.4
COPA-203ENST00000481040 PCDHA6Q9UN73 950 aa6.28□□□□□ -1.4
COPA-203ENST00000481040 ANGEL1Q9UNK9 670 aaKnown RBP6.28□□□□□ -1.4
COPA-203ENST00000481040 RPTORQ8N122 1335 aa6.27□□□□□ -1.41
COPA-203ENST00000481040 A0A0A6YYK5 440 aaPredicted RBP6.27□□□□□ -1.41
COPA-203ENST00000481040 hCG_1984214I3L0E3 225 aa6.27□□□□□ -1.41
COPA-203ENST00000481040 CYBBP04839 570 aa6.27□□□□□ -1.41
COPA-203ENST00000481040 FGFR2P21802 821 aa6.27□□□□□ -1.41
COPA-203ENST00000481040 CTSSP25774 331 aa6.27□□□□□ -1.41
COPA-203ENST00000481040 TXKP42681 527 aa6.27□□□□□ -1.41
COPA-203ENST00000481040 SLC6A9P48067 706 aa6.27□□□□□ -1.41
COPA-203ENST00000481040 RXRGP48443 463 aa6.27□□□□□ -1.41
COPA-203ENST00000481040 HK2P52789 917 aa6.27□□□□□ -1.41
COPA-203ENST00000481040 HTRA4P83105 476 aaPredicted RBP6.27□□□□□ -1.41
COPA-203ENST00000481040 PFKPQ01813 784 aa6.27□□□□□ -1.41
COPA-203ENST00000481040 SNAPC2Q13487 334 aa6.27□□□□□ -1.41
COPA-203ENST00000481040 RAB39AQ14964 217 aa6.27□□□□□ -1.41
COPA-203ENST00000481040 TAF5Q15542 800 aa6.27□□□□□ -1.41
COPA-203ENST00000481040 TAF12Q16514 161 aa6.27□□□□□ -1.41
COPA-203ENST00000481040 GJC2Q5T442 439 aaPredicted RBP6.27□□□□□ -1.41
COPA-203ENST00000481040 RETSATQ6NUM9 610 aa6.27□□□□□ -1.41
COPA-203ENST00000481040 ZNF574Q6ZN55 896 aaPredicted RBP6.27□□□□□ -1.41
COPA-203ENST00000481040 C1orf122Q6ZSJ8 110 aa6.27□□□□□ -1.41
COPA-203ENST00000481040 SUGP1Q8IWZ8 645 aaKnown RBP6.27□□□□□ -1.41
COPA-203ENST00000481040 CELF5Q8N6W0 485 aaKnown RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms