RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 TCP10Q12799 353 aa13.92□□□□□ -0.18
PDZRN3-205ENST00000466780 IKQ13123 557 aaPredicted RBP13.92□□□□□ -0.18
PDZRN3-205ENST00000466780 SNX1Q13596 522 aa13.92□□□□□ -0.18
PDZRN3-205ENST00000466780 PAXIP1Q6ZW49 1069 aaPredicted RBP13.92□□□□□ -0.18
PDZRN3-205ENST00000466780 CYP4X1Q8N118 509 aa13.92□□□□□ -0.18
PDZRN3-205ENST00000466780 GBP7Q8N8V2 638 aaPredicted RBP13.92□□□□□ -0.18
PDZRN3-205ENST00000466780 SLC5A5Q92911 643 aa13.92□□□□□ -0.18
PDZRN3-205ENST00000466780 SLCO2A1Q92959 643 aa13.92□□□□□ -0.18
PDZRN3-205ENST00000466780 ZC3H12CQ9C0D7 883 aaKnown RBP13.92□□□□□ -0.18
PDZRN3-205ENST00000466780 COA1Q9GZY4 146 aa13.92□□□□□ -0.18
PDZRN3-205ENST00000466780 NOP53Q9NZM5 478 aaKnown RBP13.92□□□□□ -0.18
PDZRN3-205ENST00000466780 PCDHAC2Q9Y5I4 1007 aa13.92□□□□□ -0.18
PDZRN3-205ENST00000466780 CCDC189A1A4V9 331 aa13.91□□□□□ -0.18
PDZRN3-205ENST00000466780 G3V3G9 751 aa13.91□□□□□ -0.18
PDZRN3-205ENST00000466780 O00370 1275 aa13.91□□□□□ -0.18
PDZRN3-205ENST00000466780 CYP1A2P05177 515 aa13.91□□□□□ -0.18
PDZRN3-205ENST00000466780 GZMAP12544 262 aa13.91□□□□□ -0.18
PDZRN3-205ENST00000466780 VAMP7P51809 220 aa13.91□□□□□ -0.18
PDZRN3-205ENST00000466780 PRELPP51888 382 aa13.91□□□□□ -0.18
PDZRN3-205ENST00000466780 RWDD2BP57060 319 aa13.91□□□□□ -0.18
PDZRN3-205ENST00000466780 KYNUQ16719 465 aa13.91□□□□□ -0.18
PDZRN3-205ENST00000466780 DCAF8Q5TAQ9 597 aa13.91□□□□□ -0.18
PDZRN3-205ENST00000466780 NSMFQ6X4W1 530 aa13.91□□□□□ -0.18
PDZRN3-205ENST00000466780 SLC47A2Q86VL8 602 aa13.91□□□□□ -0.18
PDZRN3-205ENST00000466780 RXFP1Q9HBX9 757 aa13.91□□□□□ -0.18
PDZRN3-205ENST00000466780 FSCN2O14926 492 aa13.91□□□□□ -0.18
PDZRN3-205ENST00000466780 CYP26A1O43174 497 aa13.91□□□□□ -0.18
PDZRN3-205ENST00000466780 DIAPH2O60879 1101 aa13.91□□□□□ -0.18
PDZRN3-205ENST00000466780 HIP1RO75146 1068 aa13.91□□□□□ -0.18
PDZRN3-205ENST00000466780 TTC4O95801 387 aa13.91□□□□□ -0.18
PDZRN3-205ENST00000466780 CETPP11597 493 aa13.91□□□□□ -0.18
PDZRN3-205ENST00000466780 BRAFP15056 766 aa13.91□□□□□ -0.18
PDZRN3-205ENST00000466780 CCND1P24385 295 aa13.91□□□□□ -0.18
PDZRN3-205ENST00000466780 FMO1Q01740 532 aa13.91□□□□□ -0.18
PDZRN3-205ENST00000466780 EP400NLQ6ZTU2 488 aa13.91□□□□□ -0.18
PDZRN3-205ENST00000466780 ERICH1Q86X53 443 aa13.91□□□□□ -0.18
PDZRN3-205ENST00000466780 FAM71AQ8IYT1 594 aa13.91□□□□□ -0.18
PDZRN3-205ENST00000466780 C7orf43Q8WVR3 580 aa13.91□□□□□ -0.18
PDZRN3-205ENST00000466780 KREMEN1Q96MU8 473 aa13.91□□□□□ -0.18
PDZRN3-205ENST00000466780 PWWP2AQ96N64 755 aa13.91□□□□□ -0.18
PDZRN3-205ENST00000466780 NACC1Q96RE7 527 aa13.91□□□□□ -0.18
PDZRN3-205ENST00000466780 CHST7Q9NS84 486 aa13.91□□□□□ -0.18
PDZRN3-205ENST00000466780 PIK3CDO00329 1044 aa13.9□□□□□ -0.18
PDZRN3-205ENST00000466780 HOXA10P31260 410 aaPredicted RBP13.9□□□□□ -0.18
PDZRN3-205ENST00000466780 MSH2P43246 934 aa13.9□□□□□ -0.18
PDZRN3-205ENST00000466780 MAP2K1Q02750 393 aaPredicted RBP13.9□□□□□ -0.18
PDZRN3-205ENST00000466780 MYBPC2Q14324 1141 aa13.9□□□□□ -0.18
PDZRN3-205ENST00000466780 HHIPL2Q6UWX4 724 aa13.9□□□□□ -0.18
PDZRN3-205ENST00000466780 SEPT14Q6ZU15 432 aa13.9□□□□□ -0.18
PDZRN3-205ENST00000466780 INTS8Q75QN2 995 aaKnown RBP13.9□□□□□ -0.18
PDZRN3-205ENST00000466780 BZW1Q7L1Q6 419 aaKnown RBP13.9□□□□□ -0.18
PDZRN3-205ENST00000466780 SH3BP5LQ7L8J4 393 aa13.9□□□□□ -0.18
PDZRN3-205ENST00000466780 ATG4AQ8WYN0 398 aa13.9□□□□□ -0.18
PDZRN3-205ENST00000466780 ZNF653Q96CK0 615 aa13.9□□□□□ -0.18
PDZRN3-205ENST00000466780 GMCL1Q96IK5 515 aa13.9□□□□□ -0.18
PDZRN3-205ENST00000466780 CBWD1Q9BRT8 395 aa13.9□□□□□ -0.18
PDZRN3-205ENST00000466780 HERPUD2Q9BSE4 406 aa13.9□□□□□ -0.18
PDZRN3-205ENST00000466780 ASIC3Q9UHC3 531 aa13.9□□□□□ -0.18
PDZRN3-205ENST00000466780 STK38LQ9Y2H1 464 aa13.9□□□□□ -0.18
PDZRN3-205ENST00000466780 POLRMTO00411 1230 aaKnown RBP13.9□□□□□ -0.18
PDZRN3-205ENST00000466780 HGSO14964 777 aaPredicted RBP13.9□□□□□ -0.18
PDZRN3-205ENST00000466780 GDF11O95390 407 aa13.9□□□□□ -0.18
PDZRN3-205ENST00000466780 ITIH2P19823 946 aa13.9□□□□□ -0.18
PDZRN3-205ENST00000466780 UBXN2AP68543 259 aa13.9□□□□□ -0.18
PDZRN3-205ENST00000466780 TNIP1Q15025 636 aa13.9□□□□□ -0.18
PDZRN3-205ENST00000466780 SGO2Q562F6 1265 aa13.9□□□□□ -0.18
PDZRN3-205ENST00000466780 GMCL1P1Q8NEA9 526 aa13.9□□□□□ -0.18
PDZRN3-205ENST00000466780 TEKT1Q969V4 418 aa13.9□□□□□ -0.18
PDZRN3-205ENST00000466780 TGS1Q96RS0 853 aaKnown RBP13.9□□□□□ -0.18
PDZRN3-205ENST00000466780 UNC45AQ9H3U1 944 aa13.9□□□□□ -0.18
PDZRN3-205ENST00000466780 ADAM22Q9P0K1 906 aa13.9□□□□□ -0.18
PDZRN3-205ENST00000466780 GTF3C4Q9UKN8 822 aa13.9□□□□□ -0.18
PDZRN3-205ENST00000466780 K7ENM7 598 aa13.89□□□□□ -0.19
PDZRN3-205ENST00000466780 GAS7O60861 476 aa13.89□□□□□ -0.19
PDZRN3-205ENST00000466780 SKAP2O75563 359 aaPredicted RBP13.89□□□□□ -0.19
PDZRN3-205ENST00000466780 PDE6BP35913 854 aa13.89□□□□□ -0.19
PDZRN3-205ENST00000466780 ITGA8P53708 1063 aa13.89□□□□□ -0.19
PDZRN3-205ENST00000466780 JAG1P78504 1218 aa13.89□□□□□ -0.19
PDZRN3-205ENST00000466780 RASA3Q14644 834 aa13.89□□□□□ -0.19
PDZRN3-205ENST00000466780 TRIP13Q15645 432 aaPredicted RBP13.89□□□□□ -0.19
PDZRN3-205ENST00000466780 VTI1AQ96AJ9 217 aa13.89□□□□□ -0.19
PDZRN3-205ENST00000466780 TRIM6Q9C030 488 aaPredicted RBP13.89□□□□□ -0.19
PDZRN3-205ENST00000466780 TMEM117Q9H0C3 514 aa13.89□□□□□ -0.19
PDZRN3-205ENST00000466780 SLC5A4Q9NY91 659 aa13.89□□□□□ -0.19
PDZRN3-205ENST00000466780 NINJ2Q9NZG7 142 aa13.89□□□□□ -0.19
PDZRN3-205ENST00000466780 LY75O60449 1722 aa13.89□□□□□ -0.19
PDZRN3-205ENST00000466780 P4HA2O15460 535 aa13.89□□□□□ -0.19
PDZRN3-205ENST00000466780 NEBLO76041 1014 aa13.89□□□□□ -0.19
PDZRN3-205ENST00000466780 ATP5DP30049 168 aa13.89□□□□□ -0.19
PDZRN3-205ENST00000466780 CETN1Q12798 172 aa13.89□□□□□ -0.19
PDZRN3-205ENST00000466780 MAEAQ7L5Y9 396 aa13.89□□□□□ -0.19
PDZRN3-205ENST00000466780 ECHDC2Q86YB7 292 aa13.89□□□□□ -0.19
PDZRN3-205ENST00000466780 SP8Q8IXZ3 490 aa13.89□□□□□ -0.19
PDZRN3-205ENST00000466780 SNF8Q96H20 258 aa13.89□□□□□ -0.19
PDZRN3-205ENST00000466780 KCND2Q9NZV8 630 aa13.89□□□□□ -0.19
PDZRN3-205ENST00000466780 ZNFX1Q9P2E3 1918 aaKnown RBP13.89□□□□□ -0.19
PDZRN3-205ENST00000466780 CCNB1P14635 433 aa13.88□□□□□ -0.19
PDZRN3-205ENST00000466780 CDC25CP30307 473 aa13.88□□□□□ -0.19
PDZRN3-205ENST00000466780 FOXN2P32314 431 aa13.88□□□□□ -0.19
PDZRN3-205ENST00000466780 PTK6Q13882 451 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms