RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 THNSL1Q8IYQ7 743 aa12.93□□□□□ -0.34
HSPG2-206ENST00000439717 SLC39A11Q8N1S5 342 aa12.93□□□□□ -0.34
HSPG2-206ENST00000439717 GSTCDQ8NEC7 633 aa12.93□□□□□ -0.34
HSPG2-206ENST00000439717 SPPL3Q8TCT6 385 aa12.93□□□□□ -0.34
HSPG2-206ENST00000439717 MRPL38Q96DV4 380 aaKnown RBP12.93□□□□□ -0.34
HSPG2-206ENST00000439717 ZBTB45Q96K62 511 aaPredicted RBP12.93□□□□□ -0.34
HSPG2-206ENST00000439717 ZFP42Q96MM3 310 aa12.93□□□□□ -0.34
HSPG2-206ENST00000439717 ACCSQ96QU6 501 aa12.93□□□□□ -0.34
HSPG2-206ENST00000439717 TOPORSQ9NS56 1045 aaPredicted RBP12.93□□□□□ -0.34
HSPG2-206ENST00000439717 MIOSQ9NXC5 875 aa12.93□□□□□ -0.34
HSPG2-206ENST00000439717 TBC1D7Q9P0N9 293 aa12.93□□□□□ -0.34
HSPG2-206ENST00000439717 ANKFY1Q9P2R3 1169 aa12.93□□□□□ -0.34
HSPG2-206ENST00000439717 LZTS1Q9Y250 596 aa12.93□□□□□ -0.34
HSPG2-206ENST00000439717 GDAQ9Y2T3 454 aa12.93□□□□□ -0.34
HSPG2-206ENST00000439717 NR1I2O75469 434 aa12.92□□□□□ -0.34
HSPG2-206ENST00000439717 DDHD2O94830 711 aa12.92□□□□□ -0.34
HSPG2-206ENST00000439717 ALDH2P05091 517 aa12.92□□□□□ -0.34
HSPG2-206ENST00000439717 GALTP07902 379 aa12.92□□□□□ -0.34
HSPG2-206ENST00000439717 MYBP10242 640 aa12.92□□□□□ -0.34
HSPG2-206ENST00000439717 MATR3P43243 847 aaKnown RBP eCLIP12.92□□□□□ -0.34
HSPG2-206ENST00000439717 EHHADHQ08426 723 aa12.92□□□□□ -0.34
HSPG2-206ENST00000439717 DSC1Q08554 894 aa12.92□□□□□ -0.34
HSPG2-206ENST00000439717 CUL4BQ13620 913 aa12.92□□□□□ -0.34
HSPG2-206ENST00000439717 XKR4Q5GH76 650 aa12.92□□□□□ -0.34
HSPG2-206ENST00000439717 KRBA2Q6ZNG9 492 aa12.92□□□□□ -0.34
HSPG2-206ENST00000439717 COLGALT2Q8IYK4 626 aa12.92□□□□□ -0.34
HSPG2-206ENST00000439717 MAFAQ8NHW3 353 aaPredicted RBP12.92□□□□□ -0.34
HSPG2-206ENST00000439717 POF1BQ8WVV4 589 aa12.92□□□□□ -0.34
HSPG2-206ENST00000439717 ACAP3Q96P50 834 aa12.92□□□□□ -0.34
HSPG2-206ENST00000439717 IPO9Q96P70 1041 aaKnown RBP12.92□□□□□ -0.34
HSPG2-206ENST00000439717 BLZF1Q9H2G9 400 aa12.92□□□□□ -0.34
HSPG2-206ENST00000439717 TMEM206Q9H813 350 aa12.92□□□□□ -0.34
HSPG2-206ENST00000439717 ALG13Q9NP73 1137 aaKnown RBP12.92□□□□□ -0.34
HSPG2-206ENST00000439717 TSHZ2Q9NRE2 1034 aa12.92□□□□□ -0.34
HSPG2-206ENST00000439717 KLK14Q9P0G3 267 aa12.92□□□□□ -0.34
HSPG2-206ENST00000439717 STK39Q9UEW8 545 aa12.92□□□□□ -0.34
HSPG2-206ENST00000439717 PUF60Q9UHX1 559 aaKnown RBP12.92□□□□□ -0.34
HSPG2-206ENST00000439717 STYXL1Q9Y6J8 313 aa12.92□□□□□ -0.34
HSPG2-206ENST00000439717 A0A0B4J269 797 aa12.91□□□□□ -0.34
HSPG2-206ENST00000439717 PTGESO14684 152 aa12.91□□□□□ -0.34
HSPG2-206ENST00000439717 OGTO15294 1046 aa12.91□□□□□ -0.34
HSPG2-206ENST00000439717 EIF3DO15371 548 aaKnown RBP eCLIP12.91□□□□□ -0.34
HSPG2-206ENST00000439717 THP07101 528 aa12.91□□□□□ -0.34
HSPG2-206ENST00000439717 CLTAP09496 248 aa12.91□□□□□ -0.34
HSPG2-206ENST00000439717 CASP1P29466 404 aa12.91□□□□□ -0.34
HSPG2-206ENST00000439717 SLC11A1P49279 550 aa12.91□□□□□ -0.34
HSPG2-206ENST00000439717 CASP5P51878 434 aa12.91□□□□□ -0.34
HSPG2-206ENST00000439717 PSMD2Q13200 908 aa12.91□□□□□ -0.34
HSPG2-206ENST00000439717 POSTNQ15063 836 aa12.91□□□□□ -0.34
HSPG2-206ENST00000439717 TPRNQ4KMQ1 711 aa12.91□□□□□ -0.34
HSPG2-206ENST00000439717 TIGD5Q53EQ6 642 aa12.91□□□□□ -0.34
HSPG2-206ENST00000439717 FAM26FQ5R3K3 315 aa12.91□□□□□ -0.34
HSPG2-206ENST00000439717 PDE12Q6L8Q7 609 aaKnown RBP12.91□□□□□ -0.34
HSPG2-206ENST00000439717 SLC39A4Q6P5W5 647 aa12.91□□□□□ -0.34
HSPG2-206ENST00000439717 ALKAL1Q6UXT8 129 aa12.91□□□□□ -0.34
HSPG2-206ENST00000439717 GRAMD1CQ8IYS0 662 aa12.91□□□□□ -0.34
HSPG2-206ENST00000439717 FMR1NBQ8N0W7 255 aaPredicted RBP12.91□□□□□ -0.34
HSPG2-206ENST00000439717 CEP120Q8N960 986 aa12.91□□□□□ -0.34
HSPG2-206ENST00000439717 TMEM87AQ8NBN3 555 aa12.91□□□□□ -0.34
HSPG2-206ENST00000439717 TMEM169Q96HH4 297 aa12.91□□□□□ -0.34
HSPG2-206ENST00000439717 HAPLN2Q9GZV7 340 aa12.91□□□□□ -0.34
HSPG2-206ENST00000439717 GBP3Q9H0R5 595 aa12.91□□□□□ -0.34
HSPG2-206ENST00000439717 DNAJB4Q9UDY4 337 aa12.91□□□□□ -0.34
HSPG2-206ENST00000439717 FAN1Q9Y2M0 1017 aa12.91□□□□□ -0.34
HSPG2-206ENST00000439717 UBE4BO95155 1302 aa12.9□□□□□ -0.34
HSPG2-206ENST00000439717 NRP1O14786 923 aa12.9□□□□□ -0.34
HSPG2-206ENST00000439717 KLRC4O43908 158 aa12.9□□□□□ -0.34
HSPG2-206ENST00000439717 HARSP12081 509 aaKnown RBP12.9□□□□□ -0.34
HSPG2-206ENST00000439717 PBX3P40426 434 aa12.9□□□□□ -0.34
HSPG2-206ENST00000439717 OSTNP61366 133 aa12.9□□□□□ -0.34
HSPG2-206ENST00000439717 POU5F1Q01860 360 aaKnown RBP12.9□□□□□ -0.34
HSPG2-206ENST00000439717 FAM160A1Q05DH4 1040 aa12.9□□□□□ -0.34
HSPG2-206ENST00000439717 KCNA1Q09470 495 aa12.9□□□□□ -0.34
HSPG2-206ENST00000439717 TUSC3Q13454 348 aa12.9□□□□□ -0.34
HSPG2-206ENST00000439717 SNW1Q13573 536 aaKnown RBP12.9□□□□□ -0.34
HSPG2-206ENST00000439717 CAMK1Q14012 370 aa12.9□□□□□ -0.34
HSPG2-206ENST00000439717 EPM2AIP1Q7L775 607 aaPredicted RBP12.9□□□□□ -0.34
HSPG2-206ENST00000439717 SYCP3Q8IZU3 236 aa12.9□□□□□ -0.34
HSPG2-206ENST00000439717 ENGASEQ8NFI3 743 aa12.9□□□□□ -0.34
HSPG2-206ENST00000439717 ZNF507Q8TCN5 953 aa12.9□□□□□ -0.34
HSPG2-206ENST00000439717 CCDC47Q96A33 483 aaKnown RBP12.9□□□□□ -0.34
HSPG2-206ENST00000439717 IGSF21Q96ID5 467 aa12.9□□□□□ -0.34
HSPG2-206ENST00000439717 SNX27Q96L92 541 aa12.9□□□□□ -0.34
HSPG2-206ENST00000439717 TIGD1Q96MW7 591 aa12.9□□□□□ -0.34
HSPG2-206ENST00000439717 TSPAN18Q96SJ8 248 aa12.9□□□□□ -0.34
HSPG2-206ENST00000439717 MSTO1Q9BUK6 570 aa12.9□□□□□ -0.34
HSPG2-206ENST00000439717 COLEC11Q9BWP8 271 aa12.9□□□□□ -0.34
HSPG2-206ENST00000439717 FGFBP2Q9BYJ0 223 aa12.9□□□□□ -0.34
HSPG2-206ENST00000439717 NSUN3Q9H649 340 aaKnown RBP12.9□□□□□ -0.34
HSPG2-206ENST00000439717 PLEKHA5Q9HAU0 1116 aa12.9□□□□□ -0.34
HSPG2-206ENST00000439717 TLR9Q9NR96 1032 aa12.9□□□□□ -0.34
HSPG2-206ENST00000439717 EXOC1Q9NV70 894 aa12.9□□□□□ -0.34
HSPG2-206ENST00000439717 CNTN3Q9P232 1028 aa12.9□□□□□ -0.34
HSPG2-206ENST00000439717 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.89□□□□□ -0.35
HSPG2-206ENST00000439717 NT5C1B-RDH14C9J2C7 533 aa12.89□□□□□ -0.35
HSPG2-206ENST00000439717 ANKRD63C9JTQ0 380 aa12.89□□□□□ -0.35
HSPG2-206ENST00000439717 FAM189A1O60320 539 aa12.89□□□□□ -0.35
HSPG2-206ENST00000439717 B4GALT3O60512 393 aa12.89□□□□□ -0.35
HSPG2-206ENST00000439717 PRPF6O94906 941 aaKnown RBP12.89□□□□□ -0.35
HSPG2-206ENST00000439717 RPN1P04843 607 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms