RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 GHRP10912 638 aa25■■□□□ 1.59
CPSF4-204ENST00000436336 SELPP16109 830 aa25■■□□□ 1.59
CPSF4-204ENST00000436336 PBX1P40424 430 aa25■■□□□ 1.59
CPSF4-204ENST00000436336 TNFSF9P41273 254 aa25■■□□□ 1.59
CPSF4-204ENST00000436336 POU5F1Q01860 360 aaKnown RBP25■■□□□ 1.59
CPSF4-204ENST00000436336 NFX1Q12986 1120 aaKnown RBP25■■□□□ 1.59
CPSF4-204ENST00000436336 PSMD6Q15008 389 aa25■■□□□ 1.59
CPSF4-204ENST00000436336 SEZ6Q53EL9 994 aa25■■□□□ 1.59
CPSF4-204ENST00000436336 LRRC8DQ7L1W4 858 aa25■■□□□ 1.59
CPSF4-204ENST00000436336 BRSK2Q8IWQ3 736 aa25■■□□□ 1.59
CPSF4-204ENST00000436336 DRC7Q8IY82 874 aa25■■□□□ 1.59
CPSF4-204ENST00000436336 PLEKHO2Q8TD55 490 aa25■■□□□ 1.59
CPSF4-204ENST00000436336 AGO3Q9H9G7 860 aaKnown RBP25■■□□□ 1.59
CPSF4-204ENST00000436336 ERVK-5Q9HDB9 667 aa25■■□□□ 1.59
CPSF4-204ENST00000436336 CHST12Q9NRB3 414 aa25■■□□□ 1.59
CPSF4-204ENST00000436336 DLG4P78352 724 aa25■■□□□ 1.59
CPSF4-204ENST00000436336 TLE2Q04725 743 aa25■■□□□ 1.59
CPSF4-204ENST00000436336 PAK2Q13177 524 aa25■■□□□ 1.59
CPSF4-204ENST00000436336 CEP120Q8N960 986 aa25■■□□□ 1.59
CPSF4-204ENST00000436336 PADI3Q9ULW8 664 aa25■■□□□ 1.59
CPSF4-204ENST00000436336 STX10O60499 249 aa24.99■■□□□ 1.59
CPSF4-204ENST00000436336 NPTXRO95502 500 aa24.99■■□□□ 1.59
CPSF4-204ENST00000436336 TRIM49P0CI25 452 aa24.99■■□□□ 1.59
CPSF4-204ENST00000436336 TRIM49CP0CI26 452 aa24.99■■□□□ 1.59
CPSF4-204ENST00000436336 FAAP100Q0VG06 881 aa24.99■■□□□ 1.59
CPSF4-204ENST00000436336 CCDC127Q96BQ5 260 aa24.99■■□□□ 1.59
CPSF4-204ENST00000436336 ERGIC2Q96RQ1 377 aa24.99■■□□□ 1.59
CPSF4-204ENST00000436336 TRIP11Q15643 1979 aa24.99■■□□□ 1.59
CPSF4-204ENST00000436336 CLTAP09496 248 aa24.98■■□□□ 1.59
CPSF4-204ENST00000436336 STAG3L1P0CL83 205 aa24.98■■□□□ 1.59
CPSF4-204ENST00000436336 CD52P31358 61 aa24.98■■□□□ 1.59
CPSF4-204ENST00000436336 GRM5P41594 1212 aa24.98■■□□□ 1.59
CPSF4-204ENST00000436336 SURF1Q15526 300 aa24.98■■□□□ 1.59
CPSF4-204ENST00000436336 C1orf220Q5T0J3 134 aa24.98■■□□□ 1.59
CPSF4-204ENST00000436336 OSBPL7Q9BZF2 842 aa24.98■■□□□ 1.59
CPSF4-204ENST00000436336 TRIM6Q9C030 488 aaPredicted RBP24.98■■□□□ 1.59
CPSF4-204ENST00000436336 ITIH6Q6UXX5 1313 aa24.98■■□□□ 1.59
CPSF4-204ENST00000436336 LRRIQ3A6PVS8 624 aaPredicted RBP24.98■■□□□ 1.59
CPSF4-204ENST00000436336 FMO5P49326 533 aa24.98■■□□□ 1.59
CPSF4-204ENST00000436336 OSTNP61366 133 aa24.98■■□□□ 1.59
CPSF4-204ENST00000436336 CLDN10P78369 228 aa24.98■■□□□ 1.59
CPSF4-204ENST00000436336 PTPN21Q16825 1174 aa24.98■■□□□ 1.59
CPSF4-204ENST00000436336 UBXN11Q5T124 520 aa24.98■■□□□ 1.59
CPSF4-204ENST00000436336 SPECC1LQ69YQ0 1117 aa24.98■■□□□ 1.59
CPSF4-204ENST00000436336 TMC6Q7Z403 805 aa24.98■■□□□ 1.59
CPSF4-204ENST00000436336 FNBP1Q96RU3 617 aa24.98■■□□□ 1.59
CPSF4-204ENST00000436336 EIF2AQ9BY44 585 aaKnown RBP24.98■■□□□ 1.59
CPSF4-204ENST00000436336 RPF1Q9H9Y2 349 aaKnown RBP24.98■■□□□ 1.59
CPSF4-204ENST00000436336 ATP11BQ9Y2G3 1177 aa24.98■■□□□ 1.59
CPSF4-204ENST00000436336 PDCD11Q14690 1871 aaKnown RBP24.97■■□□□ 1.59
CPSF4-204ENST00000436336 N4BP1O75113 896 aaKnown RBP24.97■■□□□ 1.59
CPSF4-204ENST00000436336 MBTPS1Q14703 1052 aa24.97■■□□□ 1.59
CPSF4-204ENST00000436336 TWF2Q6IBS0 349 aaKnown RBP24.97■■□□□ 1.59
CPSF4-204ENST00000436336 SPC24Q8NBT2 197 aa24.97■■□□□ 1.59
CPSF4-204ENST00000436336 CCDC94Q9BW85 323 aaPredicted RBP24.97■■□□□ 1.59
CPSF4-204ENST00000436336 PDE11AQ9HCR9 933 aa24.97■■□□□ 1.59
CPSF4-204ENST00000436336 GTPBP10A4D1E9 387 aaKnown RBP24.96■■□□□ 1.59
CPSF4-204ENST00000436336 DLATP10515 647 aaKnown RBP24.96■■□□□ 1.59
CPSF4-204ENST00000436336 ZSCAN20P17040 1043 aaPredicted RBP24.96■■□□□ 1.59
CPSF4-204ENST00000436336 GTF2H1P32780 548 aa24.96■■□□□ 1.59
CPSF4-204ENST00000436336 DEKP35659 375 aaKnown RBP24.96■■□□□ 1.59
CPSF4-204ENST00000436336 PPP3CAQ08209 521 aa24.96■■□□□ 1.59
CPSF4-204ENST00000436336 SYCP1Q15431 976 aa24.96■■□□□ 1.59
CPSF4-204ENST00000436336 ENOX2Q16206 610 aaKnown RBP24.96■■□□□ 1.59
CPSF4-204ENST00000436336 TMEM192Q8IY95 271 aa24.96■■□□□ 1.59
CPSF4-204ENST00000436336 ACAP3Q96P50 834 aa24.96■■□□□ 1.59
CPSF4-204ENST00000436336 SCN5AQ14524 2016 aa24.96■■□□□ 1.59
CPSF4-204ENST00000436336 P4HA2O15460 535 aa24.95■■□□□ 1.59
CPSF4-204ENST00000436336 IL18RAPO95256 599 aa24.95■■□□□ 1.59
CPSF4-204ENST00000436336 WNT7BP56706 349 aa24.95■■□□□ 1.59
CPSF4-204ENST00000436336 LRRC26Q2I0M4 334 aa24.95■■□□□ 1.59
CPSF4-204ENST00000436336 HIPK3Q9H422 1215 aa24.95■■□□□ 1.59
CPSF4-204ENST00000436336 MMRN2Q9H8L6 949 aa24.95■■□□□ 1.59
CPSF4-204ENST00000436336 IMPACTQ9P2X3 320 aa24.95■■□□□ 1.59
CPSF4-204ENST00000436336 PMM2O15305 246 aa24.95■■□□□ 1.58
CPSF4-204ENST00000436336 CXCL8P10145 99 aa24.95■■□□□ 1.58
CPSF4-204ENST00000436336 CBWD6Q4V339 395 aa24.95■■□□□ 1.58
CPSF4-204ENST00000436336 CBWD3Q5JTY5 395 aa24.95■■□□□ 1.58
CPSF4-204ENST00000436336 CBWD5Q5RIA9 395 aa24.95■■□□□ 1.58
CPSF4-204ENST00000436336 POP1Q99575 1024 aaKnown RBP24.95■■□□□ 1.58
CPSF4-204ENST00000436336 CGRRF1Q99675 332 aa24.95■■□□□ 1.58
CPSF4-204ENST00000436336 TULP1O00294 542 aaPredicted RBP24.94■■□□□ 1.58
CPSF4-204ENST00000436336 PARNO95453 639 aaKnown RBP24.94■■□□□ 1.58
CPSF4-204ENST00000436336 TNNI1P19237 187 aa24.94■■□□□ 1.58
CPSF4-204ENST00000436336 GCLMP48507 274 aa24.94■■□□□ 1.58
CPSF4-204ENST00000436336 MYL7Q01449 175 aa24.94■■□□□ 1.58
CPSF4-204ENST00000436336 KCNMA1Q12791 1236 aa24.94■■□□□ 1.58
CPSF4-204ENST00000436336 TMEM8AQ9HCN3 771 aa24.94■■□□□ 1.58
CPSF4-204ENST00000436336 TBX21Q9UL17 535 aa24.94■■□□□ 1.58
CPSF4-204ENST00000436336 SIK3Q9Y2K2 1263 aa24.94■■□□□ 1.58
CPSF4-204ENST00000436336 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.94■■□□□ 1.584e-6■□□□□ 10.1
CPSF4-204ENST00000436336 GOLGA6L6A8MZA4 724 aa24.93■■□□□ 1.58
CPSF4-204ENST00000436336 CLTBP09497 229 aa24.93■■□□□ 1.58
CPSF4-204ENST00000436336 EN2P19622 333 aaPredicted RBP24.93■■□□□ 1.58
CPSF4-204ENST00000436336 MXI1P50539 228 aa24.93■■□□□ 1.58
CPSF4-204ENST00000436336 AP3M2P53677 418 aa24.93■■□□□ 1.58
CPSF4-204ENST00000436336 CETN1Q12798 172 aa24.93■■□□□ 1.58
CPSF4-204ENST00000436336 DSC3Q14574 896 aa24.93■■□□□ 1.58
CPSF4-204ENST00000436336 KRT39Q6A163 491 aa24.93■■□□□ 1.58
CPSF4-204ENST00000436336 GBP6Q6ZN66 633 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms