RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 CLIC5Q9NZA1 410 aa12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 SAP30BPQ9UHR5 308 aaKnown RBP12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 FRMPD2Q68DX3 1309 aaPredicted RBP12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 SKIP12755 728 aa12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 AMPD1P23109 780 aa12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 ALDH1B1P30837 517 aa12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 EIF6P56537 245 aaKnown RBP12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 CHRNDQ07001 517 aa12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 THOC5Q13769 683 aaKnown RBP12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 SLC30A10Q6XR72 485 aa12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 C4orf50Q6ZRC1 276 aa12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 VPS36Q86VN1 386 aa12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 MIPOL1Q8TD10 442 aa12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 SLC20A1Q8WUM9 679 aa12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 CLPTM1LQ96KA5 538 aa12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 STMN4Q9H169 189 aaPredicted RBP12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 CARD9Q9H257 536 aa12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 DCLRE1BQ9H816 532 aa12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 STOML1Q9UBI4 398 aa12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 ZFP69BQ9UJL9 534 aa12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 LRCH1Q9Y2L9 728 aa12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 GOLGA8RI6L899 631 aa12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 CLDN3O15551 220 aa12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 PDE8AO60658 829 aa12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 ZBED4O75132 1171 aa12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 PHF2O75151 1096 aa12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 MARK3P27448 753 aa12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 PPP1R2P41236 205 aa12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 SKIV2L2P42285 1042 aaKnown RBP12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 RNF43Q68DV7 783 aa12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 IRGCQ6NXR0 463 aa12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 GPBP1Q86WP2 473 aa12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 SHKBP1Q8TBC3 707 aa12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 KLF6Q99612 283 aaPredicted RBP12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 DMAP1Q9NPF5 467 aaPredicted RBP12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 TFCP2L1Q9NZI6 479 aa12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 ARMCX1Q9P291 453 aa12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 CNOT7Q9UIV1 285 aaKnown RBP12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.05□□□□□ -0.48
SEC61A1-202ENST00000424880 MAPK13O15264 365 aa12.04□□□□□ -0.48
SEC61A1-202ENST00000424880 TP73O15350 636 aa12.04□□□□□ -0.48
SEC61A1-202ENST00000424880 MAGEB3O15480 346 aa12.04□□□□□ -0.48
SEC61A1-202ENST00000424880 GSTA2P09210 222 aa12.04□□□□□ -0.48
SEC61A1-202ENST00000424880 TNFAIP8L3Q5GJ75 292 aa12.04□□□□□ -0.48
SEC61A1-202ENST00000424880 DPY19L2P1Q6NXN4 242 aa12.04□□□□□ -0.48
SEC61A1-202ENST00000424880 AGGF1Q8N302 714 aaeCLIP12.04□□□□□ -0.48
SEC61A1-202ENST00000424880 RIBC1Q8N443 379 aaPredicted RBP12.04□□□□□ -0.48
SEC61A1-202ENST00000424880 AZIN2Q96A70 460 aa12.04□□□□□ -0.48
SEC61A1-202ENST00000424880 GJD4Q96KN9 370 aaPredicted RBP12.04□□□□□ -0.48
SEC61A1-202ENST00000424880 MAGEB18Q96M61 343 aa12.04□□□□□ -0.48
SEC61A1-202ENST00000424880 PHACTR1Q9C0D0 580 aa12.04□□□□□ -0.48
SEC61A1-202ENST00000424880 KRT82Q9NSB4 513 aa12.04□□□□□ -0.48
SEC61A1-202ENST00000424880 DDX18Q9NVP1 670 aaKnown RBP12.04□□□□□ -0.48
SEC61A1-202ENST00000424880 PCDHA3Q9Y5H8 950 aa12.04□□□□□ -0.48
SEC61A1-202ENST00000424880 RREB1Q92766 1687 aa12.04□□□□□ -0.48
SEC61A1-202ENST00000424880 RSPH10B2B2RC85 870 aa12.04□□□□□ -0.48
SEC61A1-202ENST00000424880 EXOC3O60645 756 aa12.04□□□□□ -0.48
SEC61A1-202ENST00000424880 RSPH10BP0C881 870 aa12.04□□□□□ -0.48
SEC61A1-202ENST00000424880 TSPY3P0CV98 308 aa12.04□□□□□ -0.48
SEC61A1-202ENST00000424880 TSPY8P0CW00 308 aa12.04□□□□□ -0.48
SEC61A1-202ENST00000424880 COMTP21964 271 aa12.04□□□□□ -0.48
SEC61A1-202ENST00000424880 RPA3P35244 121 aaPredicted RBP12.04□□□□□ -0.48
SEC61A1-202ENST00000424880 RASSF2P50749 326 aa12.04□□□□□ -0.48
SEC61A1-202ENST00000424880 KRT17Q04695 432 aa12.04□□□□□ -0.48
SEC61A1-202ENST00000424880 WDR72Q3MJ13 1102 aa12.04□□□□□ -0.48
SEC61A1-202ENST00000424880 TTC7BQ86TV6 843 aa12.04□□□□□ -0.48
SEC61A1-202ENST00000424880 RPGRQ92834 1020 aaKnown RBP12.04□□□□□ -0.48
SEC61A1-202ENST00000424880 ATP8A2Q9NTI2 1148 aa12.04□□□□□ -0.48
SEC61A1-202ENST00000424880 ARL8BQ9NVJ2 186 aa12.04□□□□□ -0.48
SEC61A1-202ENST00000424880 ATXN10Q9UBB4 475 aa12.04□□□□□ -0.48
SEC61A1-202ENST00000424880 LRP5O75197 1615 aa12.04□□□□□ -0.48
SEC61A1-202ENST00000424880 LYNP07948 512 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 STAT1P42224 750 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 PIK3CAP42336 1068 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 PSMC6P62333 389 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 DRAP1Q14919 205 aaPredicted RBP12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 PARP6Q2NL67 630 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 ACBD5Q5T8D3 534 aaPredicted RBP12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 ARHGEF18Q6ZSZ5 1173 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 TAB3Q8N5C8 712 aaPredicted RBP12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 LINC00116Q8NCU8 138 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 CFAP61Q8NHU2 1237 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 FBXO27Q8NI29 283 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 RFFLQ8WZ73 363 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 MCUR1Q96AQ8 359 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 HEMGNQ9BXL5 484 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 DHX36Q9H2U1 1008 aaKnown RBP12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 KCTD10Q9H3F6 313 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 MROH5Q6ZUA9 1318 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 PITPNM2Q9BZ72 1349 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 POTEFA5A3E0 1075 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 OPHN1O60890 802 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 POTEIP0CG38 1075 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 TRIM49P0CI25 452 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 TRIM49CP0CI26 452 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 RFC4P35249 363 aa12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 PABPC4Q13310 644 aaKnown RBP eCLIP12.03□□□□□ -0.486e-7■□□□□ 10.6
SEC61A1-202ENST00000424880 DHX34Q14147 1143 aaKnown RBP12.03□□□□□ -0.48
SEC61A1-202ENST00000424880 C2CD6Q53TS8 623 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 926.6 ms