RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 FNDC1Q4ZHG4 1894 aaPredicted RBP11.36□□□□□ -0.59
COL5A1-202ENST00000371820 PLXNA4Q9HCM2 1894 aa11.36□□□□□ -0.59
COL5A1-202ENST00000371820 POTEMA6NI47 508 aa11.36□□□□□ -0.59
COL5A1-202ENST00000371820 LINC01565O15544 149 aa11.36□□□□□ -0.59
COL5A1-202ENST00000371820 ERLIN2O94905 339 aa11.36□□□□□ -0.59
COL5A1-202ENST00000371820 ZNF18P17022 549 aa11.36□□□□□ -0.59
COL5A1-202ENST00000371820 IRS1P35568 1242 aa11.36□□□□□ -0.59
COL5A1-202ENST00000371820 PPM1AP35813 382 aa11.36□□□□□ -0.59
COL5A1-202ENST00000371820 LONP1P36776 959 aaKnown RBP11.36□□□□□ -0.59
COL5A1-202ENST00000371820 TECP42680 631 aa11.36□□□□□ -0.59
COL5A1-202ENST00000371820 RARRES1P49788 294 aa11.36□□□□□ -0.59
COL5A1-202ENST00000371820 GATMP50440 423 aa11.36□□□□□ -0.59
COL5A1-202ENST00000371820 POU5F1BQ06416 359 aa11.36□□□□□ -0.59
COL5A1-202ENST00000371820 LAMTOR4Q0VGL1 99 aa11.36□□□□□ -0.59
COL5A1-202ENST00000371820 ADAM15Q13444 863 aa11.36□□□□□ -0.59
COL5A1-202ENST00000371820 ZNF174Q15697 407 aa11.36□□□□□ -0.59
COL5A1-202ENST00000371820 CLUL1Q15846 466 aa11.36□□□□□ -0.59
COL5A1-202ENST00000371820 FAM102BQ5T8I3 360 aa11.36□□□□□ -0.59
COL5A1-202ENST00000371820 PDE12Q6L8Q7 609 aaKnown RBP11.36□□□□□ -0.59
COL5A1-202ENST00000371820 TMCO3Q6UWJ1 677 aa11.36□□□□□ -0.59
COL5A1-202ENST00000371820 KLHL23Q8NBE8 558 aa11.36□□□□□ -0.59
COL5A1-202ENST00000371820 RNF169Q8NCN4 708 aa11.36□□□□□ -0.59
COL5A1-202ENST00000371820 MCPH1Q8NEM0 835 aa11.36□□□□□ -0.59
COL5A1-202ENST00000371820 SPPL3Q8TCT6 385 aa11.36□□□□□ -0.59
COL5A1-202ENST00000371820 PRPF31Q8WWY3 499 aaKnown RBP11.36□□□□□ -0.59
COL5A1-202ENST00000371820 TMEM143Q96AN5 459 aa11.36□□□□□ -0.59
COL5A1-202ENST00000371820 PGBD4Q96DM1 585 aa11.36□□□□□ -0.59
COL5A1-202ENST00000371820 NACC1Q96RE7 527 aa11.36□□□□□ -0.59
COL5A1-202ENST00000371820 POLR3CQ9BUI4 534 aaPredicted RBP11.36□□□□□ -0.59
COL5A1-202ENST00000371820 TMEM60Q9H2L4 133 aa11.36□□□□□ -0.59
COL5A1-202ENST00000371820 AGPAT5Q9NUQ2 364 aa11.36□□□□□ -0.59
COL5A1-202ENST00000371820 FAM53CQ9NYF3 392 aa11.36□□□□□ -0.59
COL5A1-202ENST00000371820 SERTAD1Q9UHV2 236 aa11.36□□□□□ -0.59
COL5A1-202ENST00000371820 NFE2L3Q9Y4A8 694 aa11.36□□□□□ -0.59
COL5A1-202ENST00000371820 ITIH6Q6UXX5 1313 aa11.35□□□□□ -0.59
COL5A1-202ENST00000371820 A0A1B0GTH6 734 aa11.35□□□□□ -0.59
COL5A1-202ENST00000371820 CCDC66A2RUB6 948 aa11.35□□□□□ -0.59
COL5A1-202ENST00000371820 LRRC10BA6NIK2 292 aa11.35□□□□□ -0.59
COL5A1-202ENST00000371820 WNT7AO00755 349 aa11.35□□□□□ -0.59
COL5A1-202ENST00000371820 CCDC175P0C221 793 aa11.35□□□□□ -0.59
COL5A1-202ENST00000371820 SRGAP2CP0DJJ0 459 aa11.35□□□□□ -0.59
COL5A1-202ENST00000371820 FGFR1P11362 822 aa11.35□□□□□ -0.59
COL5A1-202ENST00000371820 FGFR4P22455 802 aa11.35□□□□□ -0.59
COL5A1-202ENST00000371820 RPA1P27694 616 aa11.35□□□□□ -0.59
COL5A1-202ENST00000371820 AXLP30530 894 aa11.35□□□□□ -0.59
COL5A1-202ENST00000371820 TOB1P50616 345 aaPredicted RBP11.35□□□□□ -0.59
COL5A1-202ENST00000371820 FXR2P51116 673 aaKnown RBP eCLIP11.35□□□□□ -0.59
COL5A1-202ENST00000371820 GPS2Q13227 327 aa11.35□□□□□ -0.59
COL5A1-202ENST00000371820 ARID5BQ14865 1188 aa11.35□□□□□ -0.59
COL5A1-202ENST00000371820 TSR1Q2NL82 804 aaKnown RBP11.35□□□□□ -0.59
COL5A1-202ENST00000371820 GLB1LQ6UWU2 654 aa11.35□□□□□ -0.59
COL5A1-202ENST00000371820 ADGRD2Q7Z7M1 963 aa11.35□□□□□ -0.59
COL5A1-202ENST00000371820 TMTC1Q8IUR5 882 aa11.35□□□□□ -0.59
COL5A1-202ENST00000371820 KSR1Q8IVT5 923 aa11.35□□□□□ -0.59
COL5A1-202ENST00000371820 THNSL1Q8IYQ7 743 aa11.35□□□□□ -0.59
COL5A1-202ENST00000371820 CEP112Q8N8E3 955 aa11.35□□□□□ -0.59
COL5A1-202ENST00000371820 RNF149Q8NC42 400 aa11.35□□□□□ -0.59
COL5A1-202ENST00000371820 NOC3LQ8WTT2 800 aaKnown RBP11.35□□□□□ -0.59
COL5A1-202ENST00000371820 POF1BQ8WVV4 589 aa11.35□□□□□ -0.59
COL5A1-202ENST00000371820 MSLNLQ96KJ4 702 aa11.35□□□□□ -0.59
COL5A1-202ENST00000371820 ZNF558Q96NG5 402 aa11.35□□□□□ -0.59
COL5A1-202ENST00000371820 CLIC6Q96NY7 704 aa11.35□□□□□ -0.59
COL5A1-202ENST00000371820 POP1Q99575 1024 aaKnown RBP11.35□□□□□ -0.59
COL5A1-202ENST00000371820 CUEDC2Q9H467 287 aa11.35□□□□□ -0.59
COL5A1-202ENST00000371820 IGFLR1Q9H665 355 aa11.35□□□□□ -0.59
COL5A1-202ENST00000371820 MAGEF1Q9HAY2 307 aa11.35□□□□□ -0.59
COL5A1-202ENST00000371820 IFT122Q9HBG6 1241 aa11.35□□□□□ -0.59
COL5A1-202ENST00000371820 BMP2KQ9NSY1 1161 aaPredicted RBP11.35□□□□□ -0.59
COL5A1-202ENST00000371820 FAM105AQ9NUU6 356 aa11.35□□□□□ -0.59
COL5A1-202ENST00000371820 TYW1Q9NV66 732 aaKnown RBP11.35□□□□□ -0.59
COL5A1-202ENST00000371820 PUF60Q9UHX1 559 aaKnown RBP11.35□□□□□ -0.59
COL5A1-202ENST00000371820 CD207Q9UJ71 328 aa11.35□□□□□ -0.59
COL5A1-202ENST00000371820 DBR1Q9UK59 544 aaKnown RBP11.35□□□□□ -0.59
COL5A1-202ENST00000371820 PPP2R2CQ9Y2T4 447 aa11.35□□□□□ -0.59
COL5A1-202ENST00000371820 PIEZO1Q92508 2521 aa11.35□□□□□ -0.59
COL5A1-202ENST00000371820 ARHGEF35A5YM69 484 aa11.34□□□□□ -0.59
COL5A1-202ENST00000371820 USP27XA6NNY8 438 aa11.34□□□□□ -0.59
COL5A1-202ENST00000371820 ACTN4O43707 911 aaKnown RBP11.34□□□□□ -0.59
COL5A1-202ENST00000371820 ZNF623O75123 536 aa11.34□□□□□ -0.59
COL5A1-202ENST00000371820 CSDE1O75534 798 aaKnown RBP11.34□□□□□ -0.59
COL5A1-202ENST00000371820 EYA4O95677 639 aa11.34□□□□□ -0.59
COL5A1-202ENST00000371820 H2AFXP16104 143 aaPredicted RBP11.34□□□□□ -0.59
COL5A1-202ENST00000371820 PRPHP41219 470 aa11.34□□□□□ -0.59
COL5A1-202ENST00000371820 NDUFV1P49821 464 aa11.34□□□□□ -0.59
COL5A1-202ENST00000371820 KRT17Q04695 432 aa11.34□□□□□ -0.59
COL5A1-202ENST00000371820 STIM1Q13586 685 aa11.34□□□□□ -0.59
COL5A1-202ENST00000371820 ZNF598Q86UK7 904 aaKnown RBP11.34□□□□□ -0.59
COL5A1-202ENST00000371820 CATSPER3Q86XQ3 398 aa11.34□□□□□ -0.59
COL5A1-202ENST00000371820 IFNLR1Q8IU57 520 aaPredicted RBP11.34□□□□□ -0.59
COL5A1-202ENST00000371820 REXO1L1PQ8IX06 675 aa11.34□□□□□ -0.59
COL5A1-202ENST00000371820 HACE1Q8IYU2 909 aa11.34□□□□□ -0.59
COL5A1-202ENST00000371820 EFHBQ8N7U6 833 aa11.34□□□□□ -0.59
COL5A1-202ENST00000371820 PDILTQ8N807 584 aa11.34□□□□□ -0.59
COL5A1-202ENST00000371820 COLGALT1Q8NBJ5 622 aa11.34□□□□□ -0.59
COL5A1-202ENST00000371820 URGCPQ8TCY9 931 aa11.34□□□□□ -0.59
COL5A1-202ENST00000371820 PIGOQ8TEQ8 1089 aa11.34□□□□□ -0.59
COL5A1-202ENST00000371820 CASD1Q96PB1 797 aa11.34□□□□□ -0.59
COL5A1-202ENST00000371820 NFKBIZQ9BYH8 718 aa11.34□□□□□ -0.59
COL5A1-202ENST00000371820 GBP3Q9H0R5 595 aa11.34□□□□□ -0.59
COL5A1-202ENST00000371820 HSD3B7Q9H2F3 369 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms