RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 CTU1Q7Z7A3 348 aaKnown RBP16.93■□□□□ 0.3
CTSA-202ENST00000354880 ZSCAN30Q86W11 494 aa16.93■□□□□ 0.3
CTSA-202ENST00000354880 CCDC112Q8NEF3 446 aa16.93■□□□□ 0.3
CTSA-202ENST00000354880 ZNF397Q8NF99 534 aaPredicted RBP16.93■□□□□ 0.3
CTSA-202ENST00000354880 TMEM40Q8WWA1 233 aa16.93■□□□□ 0.3
CTSA-202ENST00000354880 DEFB118Q96PH6 123 aa16.93■□□□□ 0.3
CTSA-202ENST00000354880 POP1Q99575 1024 aaKnown RBP16.93■□□□□ 0.3
CTSA-202ENST00000354880 TMX1Q9H3N1 280 aa16.93■□□□□ 0.3
CTSA-202ENST00000354880 PLCB1Q9NQ66 1216 aa16.93■□□□□ 0.3
CTSA-202ENST00000354880 PHF24Q9UPV7 400 aa16.93■□□□□ 0.3
CTSA-202ENST00000354880 PMM2O15305 246 aa16.93■□□□□ 0.3
CTSA-202ENST00000354880 NOL4O94818 638 aa16.93■□□□□ 0.3
CTSA-202ENST00000354880 MCF2P10911 925 aa16.93■□□□□ 0.3
CTSA-202ENST00000354880 HSPA8P11142 646 aaKnown RBP16.93■□□□□ 0.3
CTSA-202ENST00000354880 SKILP12757 684 aa16.93■□□□□ 0.3
CTSA-202ENST00000354880 GTF2H1P32780 548 aa16.93■□□□□ 0.3
CTSA-202ENST00000354880 TNFSF9P41273 254 aa16.93■□□□□ 0.3
CTSA-202ENST00000354880 ZBED6P86452 979 aa16.93■□□□□ 0.3
CTSA-202ENST00000354880 BRSK2Q8IWQ3 736 aa16.93■□□□□ 0.3
CTSA-202ENST00000354880 THNSL1Q8IYQ7 743 aa16.93■□□□□ 0.3
CTSA-202ENST00000354880 WNT8BQ93098 351 aa16.93■□□□□ 0.3
CTSA-202ENST00000354880 ADPGKQ9BRR6 497 aa16.93■□□□□ 0.3
CTSA-202ENST00000354880 EDEM3Q9BZQ6 932 aa16.93■□□□□ 0.3
CTSA-202ENST00000354880 TMEM117Q9H0C3 514 aa16.93■□□□□ 0.3
CTSA-202ENST00000354880 TMEM8AQ9HCN3 771 aa16.93■□□□□ 0.3
CTSA-202ENST00000354880 PDE11AQ9HCR9 933 aa16.93■□□□□ 0.3
CTSA-202ENST00000354880 ABHD10Q9NUJ1 306 aa16.93■□□□□ 0.3
CTSA-202ENST00000354880 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.93■□□□□ 0.3
CTSA-202ENST00000354880 CPSF3Q9UKF6 684 aaKnown RBP16.93■□□□□ 0.3
CTSA-202ENST00000354880 NOD1Q9Y239 953 aa16.93■□□□□ 0.3
CTSA-202ENST00000354880 A0A0U1RQG5 324 aaPredicted RBP16.92■□□□□ 0.3
CTSA-202ENST00000354880 DNM1LO00429 736 aa16.92■□□□□ 0.3
CTSA-202ENST00000354880 HOXA11P31270 313 aaPredicted RBP16.92■□□□□ 0.3
CTSA-202ENST00000354880 CLDN10P78369 228 aa16.92■□□□□ 0.3
CTSA-202ENST00000354880 PTK7Q13308 1070 aa16.92■□□□□ 0.3
CTSA-202ENST00000354880 KRT39Q6A163 491 aa16.92■□□□□ 0.3
CTSA-202ENST00000354880 OR8K1Q8NGG5 319 aa16.92■□□□□ 0.3
CTSA-202ENST00000354880 TRMT13Q9NUP7 481 aaKnown RBP16.92■□□□□ 0.3
CTSA-202ENST00000354880 CEP72Q9P209 647 aa16.92■□□□□ 0.3
CTSA-202ENST00000354880 TRPV2Q9Y5S1 764 aa16.92■□□□□ 0.3
CTSA-202ENST00000354880 CDY2AQ9Y6F7 541 aa16.92■□□□□ 0.3
CTSA-202ENST00000354880 ACTN1P12814 892 aa16.91■□□□□ 0.3
CTSA-202ENST00000354880 AXLP30530 894 aa16.91■□□□□ 0.3
CTSA-202ENST00000354880 WNT7BP56706 349 aa16.91■□□□□ 0.3
CTSA-202ENST00000354880 KLHDC7AQ5VTJ3 777 aa16.91■□□□□ 0.3
CTSA-202ENST00000354880 DPY19L2P1Q6NXN4 242 aa16.91■□□□□ 0.3
CTSA-202ENST00000354880 NOTUMQ6P988 496 aa16.91■□□□□ 0.3
CTSA-202ENST00000354880 TRIM65Q6PJ69 517 aa16.91■□□□□ 0.3
CTSA-202ENST00000354880 CACNA2D4Q7Z3S7 1137 aa16.91■□□□□ 0.3
CTSA-202ENST00000354880 CEP120Q8N960 986 aa16.91■□□□□ 0.3
CTSA-202ENST00000354880 SLC43A3Q8NBI5 491 aa16.91■□□□□ 0.3
CTSA-202ENST00000354880 DNAJC7Q99615 494 aa16.91■□□□□ 0.3
CTSA-202ENST00000354880 BAG1Q99933 345 aaPredicted RBP16.91■□□□□ 0.3
CTSA-202ENST00000354880 GANQ9H2C0 597 aa16.91■□□□□ 0.3
CTSA-202ENST00000354880 TOPORSQ9NS56 1045 aaPredicted RBP16.91■□□□□ 0.3
CTSA-202ENST00000354880 OGDHLQ9ULD0 1010 aa16.91■□□□□ 0.3
CTSA-202ENST00000354880 TNNI1P19237 187 aa16.91■□□□□ 0.3
CTSA-202ENST00000354880 MSNP26038 577 aaKnown RBP16.91■□□□□ 0.3
CTSA-202ENST00000354880 THPOP40225 353 aa16.91■□□□□ 0.3
CTSA-202ENST00000354880 POLR2FP61218 127 aaKnown RBP16.91■□□□□ 0.3
CTSA-202ENST00000354880 OSTNP61366 133 aa16.91■□□□□ 0.3
CTSA-202ENST00000354880 APBA1Q02410 837 aa16.91■□□□□ 0.3
CTSA-202ENST00000354880 TSR1Q2NL82 804 aaKnown RBP16.91■□□□□ 0.3
CTSA-202ENST00000354880 FBXO46Q6PJ61 603 aaPredicted RBP16.91■□□□□ 0.3
CTSA-202ENST00000354880 TMEM139Q8IV31 216 aa16.91■□□□□ 0.3
CTSA-202ENST00000354880 ESPNB1AK53 854 aa16.9■□□□□ 0.3
CTSA-202ENST00000354880 CLTAP09496 248 aa16.9■□□□□ 0.3
CTSA-202ENST00000354880 CTSHP09668 335 aa16.9■□□□□ 0.3
CTSA-202ENST00000354880 UCHL3P15374 230 aa16.9■□□□□ 0.3
CTSA-202ENST00000354880 SURF1Q15526 300 aa16.9■□□□□ 0.3
CTSA-202ENST00000354880 KYAT1Q16773 422 aa16.9■□□□□ 0.3
CTSA-202ENST00000354880 DCAF4L1Q3SXM0 396 aa16.9■□□□□ 0.3
CTSA-202ENST00000354880 EPC2Q52LR7 807 aa16.9■□□□□ 0.3
CTSA-202ENST00000354880 SLC27A1Q6PCB7 646 aa16.9■□□□□ 0.3
CTSA-202ENST00000354880 SV2AQ7L0J3 742 aa16.9■□□□□ 0.3
CTSA-202ENST00000354880 APBB1IPQ7Z5R6 666 aaPredicted RBP16.9■□□□□ 0.3
CTSA-202ENST00000354880 EHBP1Q8NDI1 1231 aa16.9■□□□□ 0.3
CTSA-202ENST00000354880 BAP1Q92560 729 aa16.9■□□□□ 0.3
CTSA-202ENST00000354880 CGRRF1Q99675 332 aa16.9■□□□□ 0.3
CTSA-202ENST00000354880 NAA15Q9BXJ9 866 aaKnown RBP16.9■□□□□ 0.3
CTSA-202ENST00000354880 SEZ6LQ9BYH1 1024 aa16.9■□□□□ 0.3
CTSA-202ENST00000354880 SENP6Q9GZR1 1112 aaPredicted RBP16.9■□□□□ 0.3
CTSA-202ENST00000354880 INTS2Q9H0H0 1204 aaKnown RBP16.9■□□□□ 0.3
CTSA-202ENST00000354880 RPF1Q9H9Y2 349 aaKnown RBP16.9■□□□□ 0.3
CTSA-202ENST00000354880 SIX2Q9NPC8 291 aa16.9■□□□□ 0.3
CTSA-202ENST00000354880 NLRC4Q9NPP4 1024 aa16.9■□□□□ 0.3
CTSA-202ENST00000354880 FBXL5Q9UKA1 691 aa16.9■□□□□ 0.3
CTSA-202ENST00000354880 PYCARDQ9ULZ3 195 aa16.9■□□□□ 0.3
CTSA-202ENST00000354880 COQ4Q9Y3A0 265 aa16.9■□□□□ 0.3
CTSA-202ENST00000354880 ARVCFO00192 962 aa16.89■□□□□ 0.29
CTSA-202ENST00000354880 CHRNA1P02708 482 aa16.89■□□□□ 0.29
CTSA-202ENST00000354880 STAG3L1P0CL83 205 aa16.89■□□□□ 0.29
CTSA-202ENST00000354880 POU5F1Q01860 360 aaKnown RBP16.89■□□□□ 0.29
CTSA-202ENST00000354880 MGAT3Q09327 533 aa16.89■□□□□ 0.29
CTSA-202ENST00000354880 ENOX2Q16206 610 aaKnown RBP16.89■□□□□ 0.29
CTSA-202ENST00000354880 LMBRD2Q68DH5 695 aaPredicted RBP16.89■□□□□ 0.29
CTSA-202ENST00000354880 RRAGAQ7L523 313 aa16.89■□□□□ 0.29
CTSA-202ENST00000354880 FBXL13Q8NEE6 735 aa16.89■□□□□ 0.29
CTSA-202ENST00000354880 LMO3Q8TAP4 145 aa16.89■□□□□ 0.29
CTSA-202ENST00000354880 ZNF516Q92618 1163 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms