RNA–Protein interactions for RNA: ENST00000325327.3

LMNB2-201, Transcript of lamin B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB2, Length 4,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-201ENST00000325327 LENG1Q96BZ8 264 aaPredicted RBP17.87■□□□□ 0.45
LMNB2-201ENST00000325327 A0A087X0B3 334 aa17.87■□□□□ 0.45
LMNB2-201ENST00000325327 OPA1O60313 960 aa17.87■□□□□ 0.45
LMNB2-201ENST00000325327 KRT15P19012 456 aa17.87■□□□□ 0.45
LMNB2-201ENST00000325327 SPATA2LQ8IUW3 424 aaPredicted RBP17.87■□□□□ 0.45
LMNB2-201ENST00000325327 SLC5A5Q92911 643 aa17.87■□□□□ 0.45
LMNB2-201ENST00000325327 YME1L1Q96TA2 773 aa17.87■□□□□ 0.45
LMNB2-201ENST00000325327 PPP1R3GB7ZBB8 358 aa17.87■□□□□ 0.45
LMNB2-201ENST00000325327 GJB1P08034 283 aa17.87■□□□□ 0.45
LMNB2-201ENST00000325327 ATXN8OSP0DMR3 200 aa17.87■□□□□ 0.45
LMNB2-201ENST00000325327 ITIH3Q06033 890 aa17.87■□□□□ 0.45
LMNB2-201ENST00000325327 VEPH1Q14D04 833 aa17.87■□□□□ 0.45
LMNB2-201ENST00000325327 FAM110CQ1W6H9 321 aa17.87■□□□□ 0.45
LMNB2-201ENST00000325327 HAS1Q92839 578 aa17.87■□□□□ 0.45
LMNB2-201ENST00000325327 L3MBTL3Q96JM7 780 aaPredicted RBP17.87■□□□□ 0.45
LMNB2-201ENST00000325327 ZBTB45Q96K62 511 aaPredicted RBP17.87■□□□□ 0.45
LMNB2-201ENST00000325327 ZNF211Q13398 564 aaPredicted RBP17.87■□□□□ 0.45
LMNB2-201ENST00000325327 SGSM1Q2NKQ1 1148 aa17.87■□□□□ 0.45
LMNB2-201ENST00000325327 ZNF720Q7Z2F6 126 aa17.87■□□□□ 0.45
LMNB2-201ENST00000325327 PALM2Q8IXS6 379 aa17.87■□□□□ 0.45
LMNB2-201ENST00000325327 ELMOD1Q8N336 334 aa17.87■□□□□ 0.45
LMNB2-201ENST00000325327 APEX2Q9UBZ4 518 aa17.87■□□□□ 0.45
LMNB2-201ENST00000325327 PACSIN2Q9UNF0 486 aaPredicted RBP17.87■□□□□ 0.45
LMNB2-201ENST00000325327 NKRFO15226 690 aaKnown RBP eCLIP17.86■□□□□ 0.451e-6■■■□□ 17.3
LMNB2-201ENST00000325327 GAS2O43903 313 aaKnown RBP17.86■□□□□ 0.45
LMNB2-201ENST00000325327 EXTL3O43909 919 aa17.86■□□□□ 0.45
LMNB2-201ENST00000325327 FXR1P51114 621 aaKnown RBP eCLIP17.86■□□□□ 0.45
LMNB2-201ENST00000325327 BTNL9Q6UXG8 535 aa17.86■□□□□ 0.45
LMNB2-201ENST00000325327 SH3TC2Q8TF17 1288 aa17.86■□□□□ 0.45
LMNB2-201ENST00000325327 SPON2Q9BUD6 331 aa17.86■□□□□ 0.45
LMNB2-201ENST00000325327 CXCL8P10145 99 aa17.86■□□□□ 0.45
LMNB2-201ENST00000325327 MKRN4PQ13434 485 aaPredicted RBP17.86■□□□□ 0.45
LMNB2-201ENST00000325327 PTGISQ16647 500 aa17.86■□□□□ 0.45
LMNB2-201ENST00000325327 SARM1Q6SZW1 724 aa17.86■□□□□ 0.45
LMNB2-201ENST00000325327 DNAAF3Q8N9W5 541 aa17.86■□□□□ 0.45
LMNB2-201ENST00000325327 RBBP8NLQ8NC74 664 aaPredicted RBP17.86■□□□□ 0.45
LMNB2-201ENST00000325327 SCFD1Q8WVM8 642 aa17.86■□□□□ 0.45
LMNB2-201ENST00000325327 C17orf75Q9HAS0 396 aa17.86■□□□□ 0.45
LMNB2-201ENST00000325327 CICQ96RK0 1608 aaPredicted RBP17.86■□□□□ 0.45
LMNB2-201ENST00000325327 CASTOR2A6NHX0 329 aa17.86■□□□□ 0.45
LMNB2-201ENST00000325327 F5H423 210 aaPredicted RBP17.86■□□□□ 0.45
LMNB2-201ENST00000325327 SOX5P35711 763 aa17.86■□□□□ 0.45
LMNB2-201ENST00000325327 GPC5P78333 572 aa17.86■□□□□ 0.45
LMNB2-201ENST00000325327 BASP1P80723 227 aaKnown RBP17.86■□□□□ 0.45
LMNB2-201ENST00000325327 ELMSAN1Q6PJG2 1045 aa17.86■□□□□ 0.45
LMNB2-201ENST00000325327 SREK1Q8WXA9 508 aaKnown RBP17.86■□□□□ 0.45
LMNB2-201ENST00000325327 RAB17Q9H0T7 212 aa17.86■□□□□ 0.45
LMNB2-201ENST00000325327 TRPC7Q9HCX4 862 aa17.86■□□□□ 0.45
LMNB2-201ENST00000325327 TIMM13Q9Y5L4 95 aaPredicted RBP17.86■□□□□ 0.45
LMNB2-201ENST00000325327 TOPAZ1Q8N9V7 1692 aa17.86■□□□□ 0.45
LMNB2-201ENST00000325327 GTF2F1P35269 517 aaKnown RBP eCLIP17.86■□□□□ 0.458e-7■■■■■ 28.7
LMNB2-201ENST00000325327 JAG1P78504 1218 aa17.86■□□□□ 0.45
LMNB2-201ENST00000325327 HTRA3P83110 453 aa17.86■□□□□ 0.45
LMNB2-201ENST00000325327 ARL13BQ3SXY8 428 aa17.86■□□□□ 0.45
LMNB2-201ENST00000325327 DARS2Q6PI48 645 aaKnown RBP17.86■□□□□ 0.45
LMNB2-201ENST00000325327 UBA3Q8TBC4 463 aa17.86■□□□□ 0.45
LMNB2-201ENST00000325327 HPSEQ9Y251 543 aa17.86■□□□□ 0.45
LMNB2-201ENST00000325327 GOLGA6CA6NDK9 693 aa17.85■□□□□ 0.45
LMNB2-201ENST00000325327 GOLGA6BA6NDN3 693 aa17.85■□□□□ 0.45
LMNB2-201ENST00000325327 TISP43B9A030 160 aa17.85■□□□□ 0.45
LMNB2-201ENST00000325327 HGSO14964 777 aaPredicted RBP17.85■□□□□ 0.45
LMNB2-201ENST00000325327 PALMO75781 387 aa17.85■□□□□ 0.45
LMNB2-201ENST00000325327 GOLGA6DP0CG33 693 aa17.85■□□□□ 0.45
LMNB2-201ENST00000325327 STAG3L1P0CL83 205 aa17.85■□□□□ 0.45
LMNB2-201ENST00000325327 BRI3BPQ8WY22 251 aa17.85■□□□□ 0.45
LMNB2-201ENST00000325327 ZNF512Q96ME7 567 aaPredicted RBP17.85■□□□□ 0.45
LMNB2-201ENST00000325327 BPIFA3Q9BQP9 254 aa17.85■□□□□ 0.45
LMNB2-201ENST00000325327 RABEP2Q9H5N1 569 aa17.85■□□□□ 0.45
LMNB2-201ENST00000325327 GOLGA6AQ9NYA3 693 aa17.85■□□□□ 0.45
LMNB2-201ENST00000325327 ABI2Q9NYB9 513 aaPredicted RBP17.85■□□□□ 0.45
LMNB2-201ENST00000325327 SYNPO2Q9UMS6 1093 aa17.85■□□□□ 0.45
LMNB2-201ENST00000325327 FGRP09769 529 aa17.85■□□□□ 0.45
LMNB2-201ENST00000325327 C2CD6Q53TS8 623 aa17.85■□□□□ 0.45
LMNB2-201ENST00000325327 CELF3Q5SZQ8 465 aaKnown RBP17.85■□□□□ 0.45
LMNB2-201ENST00000325327 DNAJC17Q9NVM6 304 aaKnown RBP17.85■□□□□ 0.45
LMNB2-201ENST00000325327 SNTG2Q9NY99 539 aa17.85■□□□□ 0.45
LMNB2-201ENST00000325327 TOMM70O94826 608 aa17.85■□□□□ 0.45
LMNB2-201ENST00000325327 KCNA1Q09470 495 aa17.85■□□□□ 0.45
LMNB2-201ENST00000325327 BTBD8Q5XKL5 378 aa17.85■□□□□ 0.45
LMNB2-201ENST00000325327 GSDMBQ8TAX9 411 aa17.85■□□□□ 0.45
LMNB2-201ENST00000325327 IFT122Q9HBG6 1241 aa17.85■□□□□ 0.45
LMNB2-201ENST00000325327 HAUS2Q9NVX0 235 aa17.85■□□□□ 0.45
LMNB2-201ENST00000325327 VPS18Q9P253 973 aa17.85■□□□□ 0.45
LMNB2-201ENST00000325327 SCINQ9Y6U3 715 aa17.85■□□□□ 0.45
LMNB2-201ENST00000325327 KIAA0391O15091 583 aaKnown RBP17.84■□□□□ 0.45
LMNB2-201ENST00000325327 EIF3DO15371 548 aaKnown RBP eCLIP17.84■□□□□ 0.45
LMNB2-201ENST00000325327 EVI5O60447 810 aa17.84■□□□□ 0.45
LMNB2-201ENST00000325327 AP3M2P53677 418 aa17.84■□□□□ 0.45
LMNB2-201ENST00000325327 TUBB4BP68371 445 aa17.84■□□□□ 0.45
LMNB2-201ENST00000325327 TUBB2AQ13885 445 aa17.84■□□□□ 0.45
LMNB2-201ENST00000325327 KYAT1Q16773 422 aa17.84■□□□□ 0.45
LMNB2-201ENST00000325327 TUBB2BQ9BVA1 445 aa17.84■□□□□ 0.45
LMNB2-201ENST00000325327 NUP85Q9BW27 656 aa17.84■□□□□ 0.45
LMNB2-201ENST00000325327 ZRANB2O95218 330 aaKnown RBP eCLIP17.84■□□□□ 0.45
LMNB2-201ENST00000325327 NUMBP49757 651 aa17.84■□□□□ 0.45
LMNB2-201ENST00000325327 KRT71Q3SY84 523 aa17.84■□□□□ 0.45
LMNB2-201ENST00000325327 GANCQ8TET4 914 aa17.84■□□□□ 0.45
LMNB2-201ENST00000325327 APBA2Q99767 749 aa17.84■□□□□ 0.45
LMNB2-201ENST00000325327 EFCAB8A8MWE9 144 aa17.84■□□□□ 0.45
LMNB2-201ENST00000325327 MCF2LO15068 1137 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms