RNA–Protein interactions for RNA: ENST00000308394.8

CASP3-201, Transcript of caspase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP3, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-201ENST00000308394 TRIM49P0CI25 452 aa11.63□□□□□ -0.55
CASP3-201ENST00000308394 TRIM49CP0CI26 452 aa11.63□□□□□ -0.55
CASP3-201ENST00000308394 VDRP11473 427 aa11.63□□□□□ -0.55
CASP3-201ENST00000308394 GARTP22102 1010 aa11.63□□□□□ -0.55
CASP3-201ENST00000308394 KRT9P35527 623 aa11.63□□□□□ -0.55
CASP3-201ENST00000308394 MAGEA8P43361 318 aa11.63□□□□□ -0.55
CASP3-201ENST00000308394 KCNMA1Q12791 1236 aa11.63□□□□□ -0.55
CASP3-201ENST00000308394 MAP9Q49MG5 647 aa11.63□□□□□ -0.55
CASP3-201ENST00000308394 CDCA2Q69YH5 1023 aaPredicted RBP11.63□□□□□ -0.55
CASP3-201ENST00000308394 CBWD2Q8IUF1 395 aa11.63□□□□□ -0.55
CASP3-201ENST00000308394 C7orf31Q8N865 590 aa11.63□□□□□ -0.55
CASP3-201ENST00000308394 NLRP7Q8WX94 980 aa11.63□□□□□ -0.55
CASP3-201ENST00000308394 ZBTB45Q96K62 511 aaPredicted RBP11.63□□□□□ -0.55
CASP3-201ENST00000308394 BAG1Q99933 345 aaPredicted RBP11.63□□□□□ -0.55
CASP3-201ENST00000308394 FDXACB1Q9BRP7 624 aaPredicted RBP11.63□□□□□ -0.55
CASP3-201ENST00000308394 FAM213AQ9BRX8 229 aa11.63□□□□□ -0.55
CASP3-201ENST00000308394 TCHPQ9BT92 498 aa11.63□□□□□ -0.55
CASP3-201ENST00000308394 FAM49AQ9H0Q0 323 aaPredicted RBP11.63□□□□□ -0.55
CASP3-201ENST00000308394 SIK3Q9Y2K2 1263 aa11.63□□□□□ -0.55
CASP3-201ENST00000308394 ZEB2O60315 1214 aa11.62□□□□□ -0.55
CASP3-201ENST00000308394 CSDE1O75534 798 aaKnown RBP11.62□□□□□ -0.55
CASP3-201ENST00000308394 EDN1P05305 212 aa11.62□□□□□ -0.55
CASP3-201ENST00000308394 HARSP12081 509 aaKnown RBP11.62□□□□□ -0.55
CASP3-201ENST00000308394 PHKA2P46019 1235 aa11.62□□□□□ -0.55
CASP3-201ENST00000308394 VAMP7P51809 220 aa11.62□□□□□ -0.55
CASP3-201ENST00000308394 PTENP60484 403 aa11.62□□□□□ -0.55
CASP3-201ENST00000308394 SLFN12LQ6IEE8 588 aa11.62□□□□□ -0.55
CASP3-201ENST00000308394 CXCL17Q6UXB2 119 aa11.62□□□□□ -0.55
CASP3-201ENST00000308394 GPD1LQ8N335 351 aa11.62□□□□□ -0.55
CASP3-201ENST00000308394 LINC01465Q8N7H1 131 aa11.62□□□□□ -0.55
CASP3-201ENST00000308394 CCDC112Q8NEF3 446 aa11.62□□□□□ -0.55
CASP3-201ENST00000308394 NEK11Q8NG66 645 aa11.62□□□□□ -0.55
CASP3-201ENST00000308394 MRPL4Q9BYD3 311 aaKnown RBP11.62□□□□□ -0.55
CASP3-201ENST00000308394 AGPAT5Q9NUQ2 364 aa11.62□□□□□ -0.55
CASP3-201ENST00000308394 SAGE1Q9NXZ1 904 aa11.62□□□□□ -0.55
CASP3-201ENST00000308394 RSPH14Q9UHP6 348 aa11.62□□□□□ -0.55
CASP3-201ENST00000308394 GINS2Q9Y248 185 aa11.62□□□□□ -0.55
CASP3-201ENST00000308394 TTLL13PA6NNM8 815 aa11.62□□□□□ -0.55
CASP3-201ENST00000308394 HAS3O00219 553 aa11.62□□□□□ -0.55
CASP3-201ENST00000308394 MSCO60682 206 aa11.62□□□□□ -0.55
CASP3-201ENST00000308394 KPNA6O60684 536 aa11.62□□□□□ -0.55
CASP3-201ENST00000308394 NLRP11P59045 1033 aaKnown RBP11.62□□□□□ -0.55
CASP3-201ENST00000308394 DLG4P78352 724 aa11.62□□□□□ -0.55
CASP3-201ENST00000308394 TMEM62Q0P6H9 643 aa11.62□□□□□ -0.55
CASP3-201ENST00000308394 TSR1Q2NL82 804 aaKnown RBP11.62□□□□□ -0.55
CASP3-201ENST00000308394 DPH6Q7L8W6 267 aa11.62□□□□□ -0.55
CASP3-201ENST00000308394 KIAA0319LQ8IZA0 1049 aa11.62□□□□□ -0.55
CASP3-201ENST00000308394 C17orf53Q8N3J3 647 aaPredicted RBP11.62□□□□□ -0.55
CASP3-201ENST00000308394 ZNF397Q8NF99 534 aaPredicted RBP11.62□□□□□ -0.55
CASP3-201ENST00000308394 KCNN1Q92952 543 aa11.62□□□□□ -0.55
CASP3-201ENST00000308394 CCDC127Q96BQ5 260 aa11.62□□□□□ -0.55
CASP3-201ENST00000308394 SLX1AQ9BQ83 275 aa11.62□□□□□ -0.55
CASP3-201ENST00000308394 LSM14BQ9BX40 385 aaKnown RBP11.62□□□□□ -0.55
CASP3-201ENST00000308394 CCDC113Q9H0I3 377 aa11.62□□□□□ -0.55
CASP3-201ENST00000308394 IFT122Q9HBG6 1241 aa11.62□□□□□ -0.55
CASP3-201ENST00000308394 ABHD10Q9NUJ1 306 aa11.62□□□□□ -0.55
CASP3-201ENST00000308394 HDAC6Q9UBN7 1215 aa11.62□□□□□ -0.55
CASP3-201ENST00000308394 AGO2Q9UKV8 859 aaKnown RBP11.62□□□□□ -0.55
CASP3-201ENST00000308394 CAPN11Q9UMQ6 739 aa11.62□□□□□ -0.55
CASP3-201ENST00000308394 CLDN3O15551 220 aa11.61□□□□□ -0.55
CASP3-201ENST00000308394 PIGRP01833 764 aa11.61□□□□□ -0.55
CASP3-201ENST00000308394 ADRB2P07550 413 aa11.61□□□□□ -0.55
CASP3-201ENST00000308394 CYP2C9P11712 490 aa11.61□□□□□ -0.55
CASP3-201ENST00000308394 BMS1Q14692 1282 aaKnown RBP11.61□□□□□ -0.55
CASP3-201ENST00000308394 EXOC3L4Q17RC7 722 aa11.61□□□□□ -0.55
CASP3-201ENST00000308394 TSNAXIP1Q2TAA8 658 aa11.61□□□□□ -0.55
CASP3-201ENST00000308394 HSP90B2PQ58FF3 399 aa11.61□□□□□ -0.55
CASP3-201ENST00000308394 VPS37AQ8NEZ2 397 aa11.61□□□□□ -0.55
CASP3-201ENST00000308394 PANX2Q96RD6 677 aa11.61□□□□□ -0.55
CASP3-201ENST00000308394 MTG1Q9BT17 334 aaPredicted RBP11.61□□□□□ -0.55
CASP3-201ENST00000308394 MSTO1Q9BUK6 570 aa11.61□□□□□ -0.55
CASP3-201ENST00000308394 MINDY3Q9H8M7 445 aa11.61□□□□□ -0.55
CASP3-201ENST00000308394 C17orf102A2RUQ5 167 aa11.61□□□□□ -0.55
CASP3-201ENST00000308394 EPHB6O15197 1021 aa11.61□□□□□ -0.55
CASP3-201ENST00000308394 MAPK13O15264 365 aa11.61□□□□□ -0.55
CASP3-201ENST00000308394 TREHO43280 583 aa11.61□□□□□ -0.55
CASP3-201ENST00000308394 KIF5CO60282 957 aa11.61□□□□□ -0.55
CASP3-201ENST00000308394 CCDC175P0C221 793 aa11.61□□□□□ -0.55
CASP3-201ENST00000308394 FMO5P49326 533 aa11.61□□□□□ -0.55
CASP3-201ENST00000308394 ACOT2P49753 483 aa11.61□□□□□ -0.55
CASP3-201ENST00000308394 ZNF200P98182 395 aaPredicted RBP11.61□□□□□ -0.55
CASP3-201ENST00000308394 PRPF4BQ13523 1007 aaKnown RBP11.61□□□□□ -0.55
CASP3-201ENST00000308394 HIC1Q14526 733 aa11.61□□□□□ -0.55
CASP3-201ENST00000308394 GBP6Q6ZN66 633 aa11.61□□□□□ -0.55
CASP3-201ENST00000308394 CACNA2D4Q7Z3S7 1137 aa11.61□□□□□ -0.55
CASP3-201ENST00000308394 ZBTB33Q86T24 672 aa11.61□□□□□ -0.55
CASP3-201ENST00000308394 KIAA1524Q8TCG1 905 aa11.61□□□□□ -0.55
CASP3-201ENST00000308394 PXYLP1Q8TE99 480 aa11.61□□□□□ -0.55
CASP3-201ENST00000308394 UBXN4Q92575 508 aa11.61□□□□□ -0.55
CASP3-201ENST00000308394 MUC3BQ9H195 1237 aa11.61□□□□□ -0.55
CASP3-201ENST00000308394 CALCOCO1Q9P1Z2 691 aa11.61□□□□□ -0.55
CASP3-201ENST00000308394 TRIM17Q9Y577 477 aa11.61□□□□□ -0.55
CASP3-201ENST00000308394 PCDHGA4Q9Y5G9 962 aa11.61□□□□□ -0.55
CASP3-201ENST00000308394 EVPLQ92817 2033 aa11.61□□□□□ -0.55
CASP3-201ENST00000308394 ZNF233A6NK53 670 aa11.6□□□□□ -0.55
CASP3-201ENST00000308394 ACKR2O00590 384 aa11.6□□□□□ -0.55
CASP3-201ENST00000308394 EXTL3O43909 919 aa11.6□□□□□ -0.55
CASP3-201ENST00000308394 TOM1L1O75674 476 aa11.6□□□□□ -0.55
CASP3-201ENST00000308394 GNAT1P11488 350 aa11.6□□□□□ -0.55
CASP3-201ENST00000308394 SLC9A1P19634 815 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms