RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 FRA10AC1Q70Z53 315 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 RHPN2Q8IUC4 686 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 SLC13A1Q9BZW2 595 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 TRIM9Q9C026 710 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 TTC7AQ9ULT0 858 aaPredicted RBP8.67□□□□□ -1.02
APOB-201ENST00000233242 SYNJ2BP-COX16A0A087WUM0 186 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 A8MXQ7 604 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 APOA4P06727 396 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 VAMP7P51809 220 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 ZNF211Q13398 564 aaPredicted RBP8.67□□□□□ -1.02
APOB-201ENST00000233242 CAPRIN1Q14444 709 aaKnown RBP8.67□□□□□ -1.02
APOB-201ENST00000233242 P3H1Q32P28 736 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 SFR1Q86XK3 245 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 TRAPPC9Q96Q05 1148 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 DNAJC7Q99615 494 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 SIKE1Q9BRV8 207 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 COX16Q9P0S2 106 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 ZC3H7BQ9UGR2 993 aaKnown RBP8.67□□□□□ -1.02
APOB-201ENST00000233242 SAC3D1A6NKF1 404 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 HMGB3O15347 200 aaKnown RBP8.67□□□□□ -1.02
APOB-201ENST00000233242 PRR29P0C7W0 189 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 EFL1Q7Z2Z2 1120 aaKnown RBP8.67□□□□□ -1.02
APOB-201ENST00000233242 PPP1R2P1Q96PQ5 205 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 ERGIC2Q96RQ1 377 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 SCN3BQ9NY72 215 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 C15orf41Q9Y2V0 281 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 HLA-DPA1P20036 260 aa8.66□□□□□ -1.02
APOB-201ENST00000233242 CCND2P30279 289 aa8.66□□□□□ -1.02
APOB-201ENST00000233242 SDC4P31431 198 aa8.66□□□□□ -1.02
APOB-201ENST00000233242 KCNQ4P56696 695 aa8.66□□□□□ -1.02
APOB-201ENST00000233242 PTPN12Q05209 780 aaKnown RBP8.66□□□□□ -1.02
APOB-201ENST00000233242 BARGINQ6ZT62 677 aa8.66□□□□□ -1.02
APOB-201ENST00000233242 CROCCP3Q8IVE0 287 aa8.66□□□□□ -1.02
APOB-201ENST00000233242 KCTD17Q8N5Z5 321 aa8.66□□□□□ -1.02
APOB-201ENST00000233242 ARL8AQ96BM9 186 aa8.66□□□□□ -1.02
APOB-201ENST00000233242 FKBP6O75344 327 aa8.66□□□□□ -1.02
APOB-201ENST00000233242 CLK1P49759 484 aaKnown RBP8.66□□□□□ -1.02
APOB-201ENST00000233242 FAM47CQ5HY64 1035 aa8.66□□□□□ -1.02
APOB-201ENST00000233242 MSL3Q8N5Y2 521 aaKnown RBP8.66□□□□□ -1.02
APOB-201ENST00000233242 HSPH1Q92598 858 aa8.66□□□□□ -1.02
APOB-201ENST00000233242 ACAP3Q96P50 834 aa8.66□□□□□ -1.02
APOB-201ENST00000233242 FSD1LQ9BXM9 530 aa8.66□□□□□ -1.02
APOB-201ENST00000233242 XDHP47989 1333 aa8.66□□□□□ -1.02
APOB-201ENST00000233242 ZC3H12BQ5HYM0 836 aaKnown RBP8.66□□□□□ -1.02
APOB-201ENST00000233242 C4orf22Q6V702 233 aa8.66□□□□□ -1.02
APOB-201ENST00000233242 RAD9BQ6WBX8 426 aa8.66□□□□□ -1.02
APOB-201ENST00000233242 LUZP2Q86TE4 346 aa8.66□□□□□ -1.02
APOB-201ENST00000233242 SCFD1Q8WVM8 642 aa8.66□□□□□ -1.02
APOB-201ENST00000233242 PCIF1Q9H4Z3 704 aa8.66□□□□□ -1.02
APOB-201ENST00000233242 CDYLQ9Y232 598 aa8.66□□□□□ -1.02
APOB-201ENST00000233242 UBTFL6P0CB48 400 aaPredicted RBP8.66□□□□□ -1.02
APOB-201ENST00000233242 ZYXQ15942 572 aaKnown RBP8.66□□□□□ -1.02
APOB-201ENST00000233242 INAQ16352 499 aa8.66□□□□□ -1.02
APOB-201ENST00000233242 TMEM270Q6UE05 265 aa8.66□□□□□ -1.02
APOB-201ENST00000233242 KLHL4Q9C0H6 718 aa8.66□□□□□ -1.02
APOB-201ENST00000233242 SAMD9Q5K651 1589 aa8.66□□□□□ -1.02
APOB-201ENST00000233242 MEIS1O00470 390 aa8.66□□□□□ -1.02
APOB-201ENST00000233242 R3HDM1Q15032 1099 aaKnown RBP8.66□□□□□ -1.02
APOB-201ENST00000233242 CNGB3Q9NQW8 809 aa8.66□□□□□ -1.02
APOB-201ENST00000233242 EXOSC10Q01780 885 aaKnown RBP8.66□□□□□ -1.02
APOB-201ENST00000233242 FASTKD1Q53R41 847 aaKnown RBP8.66□□□□□ -1.02
APOB-201ENST00000233242 LCORLQ8N3X6 602 aa8.66□□□□□ -1.02
APOB-201ENST00000233242 GREM2Q9H772 168 aa8.66□□□□□ -1.02
APOB-201ENST00000233242 TMBIM4Q9HC24 238 aa8.66□□□□□ -1.02
APOB-201ENST00000233242 GYPCP04921 128 aa8.66□□□□□ -1.02
APOB-201ENST00000233242 METTL23Q86XA0 190 aa8.66□□□□□ -1.02
APOB-201ENST00000233242 ANKS1AQ92625 1134 aa8.66□□□□□ -1.02
APOB-201ENST00000233242 RPF1Q9H9Y2 349 aaKnown RBP8.66□□□□□ -1.02
APOB-201ENST00000233242 STAP1Q9ULZ2 295 aa8.66□□□□□ -1.02
APOB-201ENST00000233242 NCAPD2Q15021 1401 aa8.66□□□□□ -1.02
APOB-201ENST00000233242 KANSL1LA0AUZ9 987 aa8.66□□□□□ -1.02
APOB-201ENST00000233242 ZNF185O15231 689 aa8.66□□□□□ -1.02
APOB-201ENST00000233242 RHOBTB3O94955 611 aa8.66□□□□□ -1.02
APOB-201ENST00000233242 CACNB1Q02641 598 aaPredicted RBP8.66□□□□□ -1.02
APOB-201ENST00000233242 DEPDC1Q5TB30 811 aa8.66□□□□□ -1.02
APOB-201ENST00000233242 PAPD7Q5XG87 772 aaKnown RBP8.66□□□□□ -1.02
APOB-201ENST00000233242 CCDC103Q8IW40 242 aa8.66□□□□□ -1.02
APOB-201ENST00000233242 SLC35G2Q8TBE7 412 aa8.66□□□□□ -1.02
APOB-201ENST00000233242 FAR2Q96K12 515 aa8.66□□□□□ -1.02
APOB-201ENST00000233242 KCND2Q9NZV8 630 aa8.66□□□□□ -1.02
APOB-201ENST00000233242 CAB39Q9Y376 341 aaPredicted RBP8.66□□□□□ -1.02
APOB-201ENST00000233242 PRR23D1E9PI22 279 aaPredicted RBP8.66□□□□□ -1.02
APOB-201ENST00000233242 SNRPAP09012 282 aaKnown RBP8.66□□□□□ -1.02
APOB-201ENST00000233242 PRR23D2P0DMB1 279 aaPredicted RBP8.66□□□□□ -1.02
APOB-201ENST00000233242 FCGR1AP12314 374 aa8.66□□□□□ -1.02
APOB-201ENST00000233242 OSBPP22059 807 aa8.66□□□□□ -1.02
APOB-201ENST00000233242 PTPN4P29074 926 aa8.66□□□□□ -1.02
APOB-201ENST00000233242 MRPS26Q9BYN8 205 aaKnown RBP8.66□□□□□ -1.02
APOB-201ENST00000233242 CCNL1Q9UK58 526 aaPredicted RBP8.66□□□□□ -1.02
APOB-201ENST00000233242 ZBTB5O15062 677 aa8.66□□□□□ -1.02
APOB-201ENST00000233242 AKAP10O43572 662 aa8.66□□□□□ -1.02
APOB-201ENST00000233242 ZNF200P98182 395 aaPredicted RBP8.66□□□□□ -1.02
APOB-201ENST00000233242 PRPF39Q86UA1 669 aaKnown RBP8.66□□□□□ -1.02
APOB-201ENST00000233242 SNX19Q92543 992 aa8.66□□□□□ -1.02
APOB-201ENST00000233242 C7orf25Q9BPX7 421 aa8.66□□□□□ -1.02
APOB-201ENST00000233242 VPS33BQ9H267 617 aa8.66□□□□□ -1.02
APOB-201ENST00000233242 FBXO2Q9UK22 296 aaPredicted RBP8.66□□□□□ -1.02
APOB-201ENST00000233242 RPS6KA5O75582 802 aa8.65□□□□□ -1.02
APOB-201ENST00000233242 XPAP23025 273 aaPredicted RBP8.65□□□□□ -1.02
APOB-201ENST00000233242 PRAMEP78395 509 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms