RNA–Protein interactions for RNA: YPR184W

GDB1, Transcript of Glycogen debranching enzyme, yeast

Gene GDB1, Length 4,611 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GDB1	YPR184W	CDC20	P26309	610 aa		4.62	□□□□□ -1.67
GDB1	YPR184W	SFK1	P35735	353 aa		4.62	□□□□□ -1.67
GDB1	YPR184W	MRPL39	P36533	70 aa		4.62	□□□□□ -1.67
GDB1	YPR184W	MIX23	P38162	196 aa		4.62	□□□□□ -1.67
GDB1	YPR184W	CUE1	P38428	203 aa		4.62	□□□□□ -1.67
GDB1	YPR184W	HXT14	P42833	540 aa		4.62	□□□□□ -1.67
GDB1	YPR184W	FRE4	P53746	719 aa		4.62	□□□□□ -1.67
GDB1	YPR184W	YML079W	Q03629	201 aa		4.62	□□□□□ -1.67
GDB1	YPR184W	YLR413W	Q06689	675 aa		4.62	□□□□□ -1.67
GDB1	YPR184W	PEX27	Q08580	376 aa		4.62	□□□□□ -1.67
GDB1	YPR184W	YLR111W	Q12528	110 aa		4.62	□□□□□ -1.67
GDB1	YPR184W	HNM1	P19807	563 aa		4.62	□□□□□ -1.67
GDB1	YPR184W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
GDB1	YPR184W	NTC20	P38302	140 aa	Predicted RBP	4.62	□□□□□ -1.67
GDB1	YPR184W	MTC4	P38335	694 aa	Known RBP	4.62	□□□□□ -1.67
GDB1	YPR184W	HXT9	P40885	567 aa		4.62	□□□□□ -1.67
GDB1	YPR184W	PFS2	P42841	465 aa	Known RBP	4.62	□□□□□ -1.67
GDB1	YPR184W	IRC7	P43623	340 aa		4.62	□□□□□ -1.67
GDB1	YPR184W	IPI3	P53877	555 aa		4.62	□□□□□ -1.67
GDB1	YPR184W	RPC11	Q04307	110 aa	Predicted RBP	4.62	□□□□□ -1.67
GDB1	YPR184W	HOF1	Q05080	669 aa		4.62	□□□□□ -1.67
GDB1	YPR184W	TMS1	Q12116	473 aa		4.62	□□□□□ -1.67
GDB1	YPR184W	YEL009C-A	A0A023PZF2	135 aa		4.62	□□□□□ -1.67
GDB1	YPR184W	VMA22	P38784	181 aa		4.62	□□□□□ -1.67
GDB1	YPR184W	PCL7	P40186	285 aa		4.62	□□□□□ -1.67
GDB1	YPR184W	XBP1	P40489	647 aa		4.62	□□□□□ -1.67
GDB1	YPR184W	RPL9B	P51401	191 aa	Known RBP	4.62	□□□□□ -1.67
GDB1	YPR184W	ASI2	P53895	289 aa		4.62	□□□□□ -1.67
GDB1	YPR184W	SPR28	Q04921	423 aa		4.62	□□□□□ -1.67
GDB1	YPR184W	YOR376W	Q08900	122 aa		4.62	□□□□□ -1.67
GDB1	YPR184W	YOR342C	Q12182	319 aa		4.62	□□□□□ -1.67
GDB1	YPR184W	YLR126C	Q12288	251 aa		4.62	□□□□□ -1.67
GDB1	YPR184W	STE18	P18852	110 aa		4.61	□□□□□ -1.67
GDB1	YPR184W	CDS1	P38221	457 aa		4.61	□□□□□ -1.67
GDB1	YPR184W	AXL2	P38928	823 aa		4.61	□□□□□ -1.67
GDB1	YPR184W	BOL3	P39724	118 aa		4.61	□□□□□ -1.67
GDB1	YPR184W	HXT16	P47185	567 aa		4.61	□□□□□ -1.67
GDB1	YPR184W	MTQ1	P53944	314 aa		4.61	□□□□□ -1.67
GDB1	YPR184W	ORT1	Q12375	292 aa		4.61	□□□□□ -1.67
GDB1	YPR184W	GEP5	Q12393	293 aa		4.61	□□□□□ -1.67
GDB1	YPR184W	MEK1	P24719	497 aa	Predicted RBP	4.61	□□□□□ -1.67
GDB1	YPR184W	PTC7	P38797	343 aa		4.61	□□□□□ -1.67
GDB1	YPR184W	QDR2	P40474	542 aa		4.61	□□□□□ -1.67
GDB1	YPR184W	PRM10	P42946	383 aa		4.61	□□□□□ -1.67
GDB1	YPR184W	QRI1	P43123	477 aa	Known RBP	4.61	□□□□□ -1.67
GDB1	YPR184W	CCC1	P47818	322 aa		4.61	□□□□□ -1.67
GDB1	YPR184W	MGA1	P53050	456 aa		4.61	□□□□□ -1.67
GDB1	YPR184W	YGR026W	P53217	278 aa		4.61	□□□□□ -1.67
GDB1	YPR184W	YGR126W	P53274	230 aa		4.61	□□□□□ -1.67
GDB1	YPR184W	ARO10	Q06408	635 aa		4.61	□□□□□ -1.67
GDB1	YPR184W	ALG6	Q12001	544 aa	Known RBP	4.61	□□□□□ -1.67
GDB1	YPR184W	YDL009C	Q12210	107 aa		4.61	□□□□□ -1.67
GDB1	YPR184W	RPL20A	P0CX23	172 aa	Known RBP	4.61	□□□□□ -1.67
GDB1	YPR184W	RPL20B	P0CX24	172 aa	Predicted RBP	4.61	□□□□□ -1.67
GDB1	YPR184W	CTP1	P38152	299 aa		4.61	□□□□□ -1.67
GDB1	YPR184W	ERV15	P38312	142 aa		4.61	□□□□□ -1.67
GDB1	YPR184W	PRS2	P38620	318 aa	Known RBP	4.61	□□□□□ -1.67
GDB1	YPR184W	PAC1	P39946	494 aa	Known RBP	4.61	□□□□□ -1.67
GDB1	YPR184W	UBC7	Q02159	165 aa		4.61	□□□□□ -1.67
GDB1	YPR184W	SMA2	Q04658	369 aa		4.61	□□□□□ -1.67
GDB1	YPR184W	YPR109W	Q06104	294 aa		4.61	□□□□□ -1.67
GDB1	YPR184W	PIN3	Q06449	215 aa		4.61	□□□□□ -1.67
GDB1	YPR184W	MRX9	Q07349	420 aa	Known RBP	4.61	□□□□□ -1.67
GDB1	YPR184W	AVO1	Q08236	1176 aa		4.61	□□□□□ -1.67
GDB1	YPR184W	ACB1	P31787	87 aa		4.61	□□□□□ -1.67
GDB1	YPR184W	YKL187C	P34231	750 aa		4.61	□□□□□ -1.67
GDB1	YPR184W	SHE1	P38200	338 aa		4.61	□□□□□ -1.67
GDB1	YPR184W	CAF16	P43569	289 aa		4.61	□□□□□ -1.67
GDB1	YPR184W	ERJ5	P43613	295 aa	Predicted RBP	4.61	□□□□□ -1.67
GDB1	YPR184W	YJR056C	P47115	236 aa		4.61	□□□□□ -1.67
GDB1	YPR184W	DAD3	P69850	94 aa		4.61	□□□□□ -1.67
GDB1	YPR184W	SMP3	Q04174	516 aa		4.61	□□□□□ -1.67
GDB1	YPR184W	REH1	Q06709	432 aa		4.61	□□□□□ -1.67
GDB1	YPR184W	RFU1	Q08003	200 aa		4.61	□□□□□ -1.67
GDB1	YPR184W	YDL177C	Q12257	170 aa		4.61	□□□□□ -1.67
GDB1	YPR184W	TRR1	P29509	319 aa	Known RBP	4.6	□□□□□ -1.67
GDB1	YPR184W	CLB6	P32943	380 aa		4.6	□□□□□ -1.67
GDB1	YPR184W	RPB11	P38902	120 aa		4.6	□□□□□ -1.67
GDB1	YPR184W	TED1	P40533	473 aa		4.6	□□□□□ -1.67
GDB1	YPR184W	YIR035C	P40579	254 aa		4.6	□□□□□ -1.67
GDB1	YPR184W	RPA14	P50106	137 aa		4.6	□□□□□ -1.67
GDB1	YPR184W	SLX9	P53251	210 aa	Predicted RBP	4.6	□□□□□ -1.67
GDB1	YPR184W	YNR066C	P53752	436 aa		4.6	□□□□□ -1.67
GDB1	YPR184W	APS2	Q00381	147 aa		4.6	□□□□□ -1.67
GDB1	YPR184W	YPR174C	Q06616	221 aa	Predicted RBP	4.6	□□□□□ -1.67
GDB1	YPR184W	SCP1	Q08873	200 aa		4.6	□□□□□ -1.67
GDB1	YPR184W	TY1A-NL1	Q12391	440 aa	Known RBP	4.6	□□□□□ -1.67
GDB1	YPR184W	ADE8	P04161	214 aa		4.6	□□□□□ -1.67
GDB1	YPR184W	RPS16A	P0CX51	143 aa	Known RBP	4.6	□□□□□ -1.67
GDB1	YPR184W	RPS16B	P0CX52	143 aa	Known RBP	4.6	□□□□□ -1.67
GDB1	YPR184W	PUT3	P25502	979 aa	Predicted RBP	4.6	□□□□□ -1.67
GDB1	YPR184W	IPT1	P38954	527 aa		4.6	□□□□□ -1.67
GDB1	YPR184W	ALP1	P38971	573 aa		4.6	□□□□□ -1.67
GDB1	YPR184W	RMD6	P39975	231 aa		4.6	□□□□□ -1.67
GDB1	YPR184W	YPS6	P40583	537 aa		4.6	□□□□□ -1.67
GDB1	YPR184W	SYS1	P41544	203 aa		4.6	□□□□□ -1.67
GDB1	YPR184W	YFL054C	P43549	646 aa		4.6	□□□□□ -1.67
GDB1	YPR184W	UBC9	P50623	157 aa	Predicted RBP	4.6	□□□□□ -1.67
GDB1	YPR184W	GAS1	P22146	559 aa	Known RBP	4.6	□□□□□ -1.67
GDB1	YPR184W	AFR1	P33304	620 aa		4.6	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 69.5 ms