RNA–Protein interactions for RNA: YPR005C

HAL1, Transcript of Cytoplasmic protein involved in halotolerance, yeast

Gene HAL1, Length 885 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HAL1	YPR005C	YGL260W	P53056	76 aa		4.59	□□□□□ -1.67
HAL1	YPR005C	ADD37	Q03233	198 aa		4.59	□□□□□ -1.67
HAL1	YPR005C	YPR098C	Q06089	161 aa		4.59	□□□□□ -1.67
HAL1	YPR005C	YCT1	Q12235	531 aa		4.59	□□□□□ -1.67
HAL1	YPR005C	YPL119C-A	Q3E751	87 aa		4.59	□□□□□ -1.67
HAL1	YPR005C	YKL183C-A	Q3E765	70 aa		4.59	□□□□□ -1.67
HAL1	YPR005C	YMR316C-A	I2HB70	103 aa		4.58	□□□□□ -1.68
HAL1	YPR005C	YBR121C-A	P0C5L4	52 aa		4.58	□□□□□ -1.68
HAL1	YPR005C	YCR102C	P25608	368 aa		4.58	□□□□□ -1.68
HAL1	YPR005C	OM14	P38325	134 aa		4.58	□□□□□ -1.68
HAL1	YPR005C	CUE1	P38428	203 aa		4.58	□□□□□ -1.68
HAL1	YPR005C	YER034W	P40022	185 aa	Known RBP	4.58	□□□□□ -1.68
HAL1	YPR005C	UTP18	P40362	594 aa	Predicted RBP	4.58	□□□□□ -1.68
HAL1	YPR005C	SER33	P40510	469 aa		4.58	□□□□□ -1.68
HAL1	YPR005C	CWC23	P52868	283 aa	Predicted RBP	4.58	□□□□□ -1.68
HAL1	YPR005C	BOR1	P53838	576 aa		4.58	□□□□□ -1.68
HAL1	YPR005C	SWS2	P53937	143 aa		4.58	□□□□□ -1.68
HAL1	YPR005C	RHO3	Q00245	231 aa	Known RBP	4.58	□□□□□ -1.68
HAL1	YPR005C	MRX11	Q03079	207 aa		4.58	□□□□□ -1.68
HAL1	YPR005C	YOR292C	Q08743	309 aa		4.58	□□□□□ -1.68
HAL1	YPR005C	SRO7	Q12038	1033 aa		4.58	□□□□□ -1.68
HAL1	YPR005C	YMR230W-A	Q3E7B5	62 aa		4.58	□□□□□ -1.68
HAL1	YPR005C	RAD51	P25454	400 aa		4.57	□□□□□ -1.68
HAL1	YPR005C	JEN1	P36035	616 aa		4.57	□□□□□ -1.68
HAL1	YPR005C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	RIP-Chip
HAL1	YPR005C	SHE3	P38272	425 aa	Known RBP	4.57	□□□□□ -1.68
HAL1	YPR005C	FZO1	P38297	855 aa		4.57	□□□□□ -1.68
HAL1	YPR005C	SEN34	P39707	275 aa		4.57	□□□□□ -1.68
HAL1	YPR005C	YNL194C	P40169	301 aa		4.57	□□□□□ -1.68
HAL1	YPR005C	GAB1	P41733	394 aa		4.57	□□□□□ -1.68
HAL1	YPR005C	LIF1	P53150	421 aa		4.57	□□□□□ -1.68
HAL1	YPR005C	ATG17	Q06410	417 aa		4.57	□□□□□ -1.68
HAL1	YPR005C	DIB1	Q06819	143 aa	Predicted RBP	4.57	□□□□□ -1.68
HAL1	YPR005C	YRA1	Q12159	226 aa	Known RBP	4.57	□□□□□ -1.68
HAL1	YPR005C	AI5_BETA	Q9ZZX0	354 aa		4.57	□□□□□ -1.68
HAL1	YPR005C	MATALPHA2	P0CY08	210 aa		4.56	□□□□□ -1.68
HAL1	YPR005C	HMLALPHA2	P0CY09	210 aa		4.56	□□□□□ -1.68
HAL1	YPR005C	ATG15	P25641	520 aa		4.56	□□□□□ -1.68
HAL1	YPR005C	CAM1	P29547	415 aa	Known RBP	4.56	□□□□□ -1.68
HAL1	YPR005C	MRP21	P38175	177 aa		4.56	□□□□□ -1.68
HAL1	YPR005C	RFT1	P38206	574 aa	Predicted RBP	4.56	□□□□□ -1.68
HAL1	YPR005C	MBA1	P38300	278 aa		4.56	□□□□□ -1.68
HAL1	YPR005C	IGD1	P43598	195 aa		4.56	□□□□□ -1.68
HAL1	YPR005C	ASP3-2	P0CX77	362 aa		4.55	□□□□□ -1.68
HAL1	YPR005C	ASP3-3	P0CX78	362 aa		4.55	□□□□□ -1.68
HAL1	YPR005C	ASP3-4	P0CX79	362 aa		4.55	□□□□□ -1.68
HAL1	YPR005C	ASP3-1	P0CZ17	362 aa		4.55	□□□□□ -1.68
HAL1	YPR005C	OSM1	P21375	501 aa	Known RBP	4.55	□□□□□ -1.68
HAL1	YPR005C	URA8	P38627	578 aa	Predicted RBP	4.55	□□□□□ -1.68
HAL1	YPR005C	GGC1	P38988	300 aa		4.55	□□□□□ -1.68
HAL1	YPR005C	KRE29	P40026	464 aa		4.55	□□□□□ -1.68
HAL1	YPR005C	NBP35	P52920	328 aa		4.55	□□□□□ -1.68
HAL1	YPR005C	RMI1	Q02685	241 aa		4.55	□□□□□ -1.68
HAL1	YPR005C	SNZ1	Q03148	297 aa		4.55	□□□□□ -1.68
HAL1	YPR005C	PEX10	Q05568	337 aa		4.55	□□□□□ -1.68
HAL1	YPR005C	RRS1	Q08746	203 aa	Known RBP	4.55	□□□□□ -1.68
HAL1	YPR005C	YPL278C	Q08990	100 aa		4.55	□□□□□ -1.68
HAL1	YPR005C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
HAL1	YPR005C	FRM2	P37261	193 aa		4.54	□□□□□ -1.68
HAL1	YPR005C	IMP4	P53941	290 aa	Known RBP	4.54	□□□□□ -1.68
HAL1	YPR005C	CTF19	Q02732	369 aa		4.54	□□□□□ -1.68
HAL1	YPR005C	RPL21A	Q02753	160 aa	Known RBP	4.54	□□□□□ -1.68
HAL1	YPR005C	API2	Q04413	109 aa		4.54	□□□□□ -1.68
HAL1	YPR005C	CBF1	P17106	351 aa		4.53	□□□□□ -1.68
HAL1	YPR005C	IMP1	P28627	190 aa		4.53	□□□□□ -1.68
HAL1	YPR005C	VPH2	P32341	215 aa		4.53	□□□□□ -1.68
HAL1	YPR005C	SGE1	P33335	543 aa		4.53	□□□□□ -1.68
HAL1	YPR005C	MRPL3	P36516	390 aa		4.53	□□□□□ -1.68
HAL1	YPR005C	YBR096W	P38256	230 aa		4.53	□□□□□ -1.68
HAL1	YPR005C	YIL012W	P40551	113 aa		4.53	□□□□□ -1.68
HAL1	YPR005C	SDC1	Q03323	175 aa		4.53	□□□□□ -1.68
HAL1	YPR005C	PLB3	Q08108	686 aa		4.53	□□□□□ -1.68
HAL1	YPR005C	RRG7	Q08774	242 aa	Predicted RBP	4.53	□□□□□ -1.68
HAL1	YPR005C	RAD9	P14737	1309 aa		4.52	□□□□□ -1.69
HAL1	YPR005C	TPI1	P00942	248 aa	Known RBP	4.52	□□□□□ -1.69
HAL1	YPR005C	HTB1	P02293	131 aa	Known RBP	4.52	□□□□□ -1.69
HAL1	YPR005C	HTB2	P02294	131 aa		4.52	□□□□□ -1.69
HAL1	YPR005C	RPL4A	P10664	362 aa	Known RBP	4.52	□□□□□ -1.69
HAL1	YPR005C	CDC10	P25342	322 aa	Known RBP	4.52	□□□□□ -1.69
HAL1	YPR005C	YCR025C	P25352	136 aa		4.52	□□□□□ -1.69
HAL1	YPR005C	SPS19	P32573	292 aa	Known RBP	4.52	□□□□□ -1.69
HAL1	YPR005C	SSO1	P32867	290 aa		4.52	□□□□□ -1.69
HAL1	YPR005C	TIP20	P33891	701 aa		4.52	□□□□□ -1.69
HAL1	YPR005C	PRE6	P40303	254 aa	Known RBP	4.52	□□□□□ -1.69
HAL1	YPR005C	AVT7	P40501	490 aa		4.52	□□□□□ -1.69
HAL1	YPR005C	RPL4B	P49626	362 aa	Known RBP	4.52	□□□□□ -1.69
HAL1	YPR005C	PRP24	P49960	444 aa	Known RBP	4.52	□□□□□ -1.69
HAL1	YPR005C	MIC26	P50087	233 aa		4.52	□□□□□ -1.69
HAL1	YPR005C	FMP48	P53233	369 aa		4.52	□□□□□ -1.69
HAL1	YPR005C	CDC123	Q05791	360 aa		4.52	□□□□□ -1.69
HAL1	YPR005C	ARC18	Q05933	178 aa	Known RBP	4.52	□□□□□ -1.69
HAL1	YPR005C	DXO1	Q06349	442 aa		4.52	□□□□□ -1.69
HAL1	YPR005C	RRP40	Q08285	240 aa	Known RBP	4.52	□□□□□ -1.69
HAL1	YPR005C	YDR018C	Q12185	396 aa		4.52	□□□□□ -1.69
HAL1	YPR005C	TRM10	Q12400	293 aa		4.52	□□□□□ -1.69
HAL1	YPR005C	TAF14	P35189	244 aa		4.51	□□□□□ -1.69
HAL1	YPR005C	SWD3	P38123	315 aa		4.51	□□□□□ -1.69
HAL1	YPR005C	GOS1	P38736	223 aa		4.51	□□□□□ -1.69
HAL1	YPR005C	MEP2	P41948	499 aa		4.51	□□□□□ -1.69
HAL1	YPR005C	YPI1	P43587	155 aa		4.51	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 94 ms