RNA–Protein interactions for RNA: YOL005C

RPB11, Transcript of RNA polymerase II subunit B12.5, yeastyeast

Gene RPB11, Length 363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB11YOL005C RRG8Q06109 277 aa1.68□□□□□ -2.14
RPB11YOL005C YLR446WQ06204 433 aa1.68□□□□□ -2.14
RPB11YOL005C TAZ1Q06510 381 aa1.68□□□□□ -2.14
RPB11YOL005C YPR063CQ12160 140 aa1.68□□□□□ -2.14
RPB11YOL005C YRF1-3P0CX14 1859 aa1.68□□□□□ -2.14
RPB11YOL005C YRF1-7P0CX15 1859 aa1.68□□□□□ -2.14
RPB11YOL005C YRF1-6P53819 1859 aa1.68□□□□□ -2.14
RPB11YOL005C YIL177CP40434 1758 aa1.67□□□□□ -2.14
RPB11YOL005C YJL225CP40889 1758 aa1.67□□□□□ -2.14
RPB11YOL005C APC1P53886 1748 aa1.67□□□□□ -2.14
RPB11YOL005C TOM1Q03280 3268 aa1.67□□□□□ -2.14
RPB11YOL005C HPR1P17629 752 aaKnown RBP1.67□□□□□ -2.14
RPB11YOL005C CDC42P19073 191 aa1.67□□□□□ -2.14
RPB11YOL005C VPS1P21576 704 aaKnown RBP1.67□□□□□ -2.14
RPB11YOL005C IFM1P25038 676 aa1.67□□□□□ -2.14
RPB11YOL005C YCR025CP25352 136 aa1.67□□□□□ -2.14
RPB11YOL005C IMP3P32899 183 aaPredicted RBP1.67□□□□□ -2.14
RPB11YOL005C SLX1P38324 304 aa1.67□□□□□ -2.14
RPB11YOL005C KRE29P40026 464 aa1.67□□□□□ -2.14
RPB11YOL005C GDS1P41913 522 aa1.67□□□□□ -2.14
RPB11YOL005C LOH1P47055 219 aa1.67□□□□□ -2.14
RPB11YOL005C KEL2P50090 882 aa1.67□□□□□ -2.14
RPB11YOL005C BIO4P53630 237 aa1.67□□□□□ -2.14
RPB11YOL005C YNL040WP53960 456 aaPredicted RBP1.67□□□□□ -2.14
RPB11YOL005C YDR114CQ04597 100 aa1.67□□□□□ -2.14
RPB11YOL005C GTO3Q04806 366 aa1.67□□□□□ -2.14
RPB11YOL005C PEX30Q06169 523 aa1.67□□□□□ -2.14
RPB11YOL005C DXO1Q06349 442 aa1.67□□□□□ -2.14
RPB11YOL005C YPL264CQ08980 353 aa1.67□□□□□ -2.14
RPB11YOL005C MLP1Q02455 1875 aaKnown RBP1.67□□□□□ -2.14
RPB11YOL005C GAL7P08431 366 aa1.66□□□□□ -2.14
RPB11YOL005C UGA1P17649 471 aa1.66□□□□□ -2.14
RPB11YOL005C ARO4P32449 370 aaKnown RBP1.66□□□□□ -2.14
RPB11YOL005C MRPL3P36516 390 aa1.66□□□□□ -2.14
RPB11YOL005C ECM14P38836 430 aa1.66□□□□□ -2.14
RPB11YOL005C BUD13P46947 266 aaPredicted RBP1.66□□□□□ -2.14
RPB11YOL005C MPP10P47083 593 aaKnown RBP1.66□□□□□ -2.14
RPB11YOL005C UBC13P52490 153 aa1.66□□□□□ -2.14
RPB11YOL005C RPN14P53196 417 aa1.66□□□□□ -2.14
RPB11YOL005C YNL050CP53952 270 aa1.66□□□□□ -2.14
RPB11YOL005C MRS2Q01926 470 aa1.66□□□□□ -2.14
RPB11YOL005C YMR209CQ03648 457 aa1.66□□□□□ -2.14
RPB11YOL005C DPP1Q05521 289 aa1.66□□□□□ -2.14
RPB11YOL005C MRPL23Q12487 163 aaPredicted RBP1.66□□□□□ -2.14
RPB11YOL005C SIR4P11978 1358 aa1.66□□□□□ -2.14
RPB11YOL005C ILV1P00927 576 aaKnown RBP1.65□□□□□ -2.15
RPB11YOL005C YAK1P14680 807 aa1.65□□□□□ -2.15
RPB11YOL005C MSS116P15424 664 aaKnown RBP1.65□□□□□ -2.15
RPB11YOL005C DAL81P21657 970 aa1.65□□□□□ -2.15
RPB11YOL005C PRE7P23724 241 aaKnown RBP1.65□□□□□ -2.15
RPB11YOL005C RPS0AP32905 252 aaKnown RBP1.65□□□□□ -2.15
RPB11YOL005C SPT4P32914 102 aaPredicted RBP1.65□□□□□ -2.15
RPB11YOL005C PPQ1P32945 549 aa1.65□□□□□ -2.15
RPB11YOL005C TKL2P33315 681 aa1.65□□□□□ -2.15
RPB11YOL005C RPC37P36121 282 aa1.65□□□□□ -2.15
RPB11YOL005C HIS2P38635 335 aa1.65□□□□□ -2.15
RPB11YOL005C SHC1P39000 512 aa1.65□□□□□ -2.15
RPB11YOL005C VAB2P40003 282 aa1.65□□□□□ -2.15
RPB11YOL005C YFL064CP43540 174 aa1.65□□□□□ -2.15
RPB11YOL005C YFR045WP43617 309 aa1.65□□□□□ -2.15
RPB11YOL005C YJL144WP47009 104 aa1.65□□□□□ -2.15
RPB11YOL005C ARP5P53946 755 aa1.65□□□□□ -2.15
RPB11YOL005C DIA1P54005 336 aa1.65□□□□□ -2.15
RPB11YOL005C ACT1P60010 375 aaKnown RBP1.65□□□□□ -2.15
RPB11YOL005C YPL077CQ02831 240 aa1.65□□□□□ -2.15
RPB11YOL005C YPL113CQ02961 396 aa1.65□□□□□ -2.15
RPB11YOL005C NNT1Q05874 261 aa1.65□□□□□ -2.15
RPB11YOL005C GPN3Q06543 272 aa1.65□□□□□ -2.15
RPB11YOL005C YLR413WQ06689 675 aa1.65□□□□□ -2.15
RPB11YOL005C RLP24Q07915 199 aaKnown RBP1.65□□□□□ -2.15
RPB11YOL005C SGT2Q12118 346 aaKnown RBP1.65□□□□□ -2.15
RPB11YOL005C YAL063C-AQ3E791 96 aa1.65□□□□□ -2.15
RPB11YOL005C TFS1P14306 219 aa1.64□□□□□ -2.15
RPB11YOL005C DAL5P15365 543 aa1.64□□□□□ -2.15
RPB11YOL005C MRPL40P36534 297 aa1.64□□□□□ -2.15
RPB11YOL005C YBL081WP38180 368 aaKnown RBP1.64□□□□□ -2.15
RPB11YOL005C SEN34P39707 275 aa1.64□□□□□ -2.15
RPB11YOL005C AVT7P40501 490 aa1.64□□□□□ -2.15
RPB11YOL005C CDC40P40968 455 aaPredicted RBP1.64□□□□□ -2.15
RPB11YOL005C AGP3P43548 558 aa1.64□□□□□ -2.15
RPB11YOL005C YGL185CP53100 379 aa1.64□□□□□ -2.15
RPB11YOL005C COG7P53195 279 aa1.64□□□□□ -2.15
RPB11YOL005C SPO19Q03029 223 aa1.64□□□□□ -2.15
RPB11YOL005C BER1Q06688 274 aaKnown RBP1.64□□□□□ -2.15
RPB11YOL005C YDL144CQ07589 356 aa1.64□□□□□ -2.15
RPB11YOL005C MRX4Q12467 430 aa1.64□□□□□ -2.15
RPB11YOL005C PMD1P32634 1753 aa1.63□□□□□ -2.15
RPB11YOL005C RIM15P43565 1770 aa1.63□□□□□ -2.15
RPB11YOL005C MED8P38304 223 aa1.63□□□□□ -2.15
RPB11YOL005C SMC2P38989 1170 aaKnown RBP1.63□□□□□ -2.15
RPB11YOL005C SPO73P40031 143 aa1.63□□□□□ -2.15
RPB11YOL005C AVT6P40074 448 aa1.63□□□□□ -2.15
RPB11YOL005C SYS1P41544 203 aa1.63□□□□□ -2.15
RPB11YOL005C GCD14P46959 383 aaPredicted RBP1.63□□□□□ -2.15
RPB11YOL005C GTO1P48239 356 aa1.63□□□□□ -2.15
RPB11YOL005C UFD1P53044 361 aa1.63□□□□□ -2.15
RPB11YOL005C LIF1P53150 421 aa1.63□□□□□ -2.15
RPB11YOL005C YNL260CP53846 198 aa1.63□□□□□ -2.15
RPB11YOL005C OSH6Q02201 448 aa1.63□□□□□ -2.15
RPB11YOL005C HRT1Q08273 121 aa1.63□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 60 ms