RNA–Protein interactions for RNA: YKR014C

YPT52, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene YPT52, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT52YKR014C TAF9Q05027 157 aa2.1□□□□□ -2.07
YPT52YKR014C SFH1Q06168 426 aa2.1□□□□□ -2.07
YPT52YKR014C YLR173WQ06247 608 aa2.1□□□□□ -2.07
YPT52YKR014C CTS2Q06350 511 aa2.1□□□□□ -2.07
YPT52YKR014C CLP1Q08685 445 aaPredicted RBP2.1□□□□□ -2.07
YPT52YKR014C HIS1P00498 297 aaKnown RBP2.09□□□□□ -2.07
YPT52YKR014C RPS3P05750 240 aaKnown RBP2.09□□□□□ -2.07
YPT52YKR014C PET494P07390 489 aaPredicted RBP2.09□□□□□ -2.07
YPT52YKR014C KRE1P17260 313 aa2.09□□□□□ -2.07
YPT52YKR014C RRT12P25381 491 aa2.09□□□□□ -2.07
YPT52YKR014C POF1P25576 258 aa2.09□□□□□ -2.07
YPT52YKR014C IMP1P28627 190 aa2.09□□□□□ -2.07
YPT52YKR014C MRPL3P36516 390 aa2.09□□□□□ -2.07
YPT52YKR014C SPT8P38915 602 aa2.09□□□□□ -2.07
YPT52YKR014C SHC1P39000 512 aa2.09□□□□□ -2.07
YPT52YKR014C PRM9P39551 298 aa2.09□□□□□ -2.07
YPT52YKR014C KRE29P40026 464 aa2.09□□□□□ -2.07
YPT52YKR014C DDI1P40087 428 aa2.09□□□□□ -2.07
YPT52YKR014C BNA6P43619 295 aa2.09□□□□□ -2.07
YPT52YKR014C YAR1P46683 200 aa2.09□□□□□ -2.07
YPT52YKR014C IBA57P47158 497 aa2.09□□□□□ -2.07
YPT52YKR014C PRP24P49960 444 aaKnown RBP2.09□□□□□ -2.07
YPT52YKR014C TRM44Q02648 567 aaKnown RBP2.09□□□□□ -2.07
YPT52YKR014C VPS60Q03390 229 aa2.09□□□□□ -2.07
YPT52YKR014C CTR3Q06686 241 aa2.09□□□□□ -2.07
YPT52YKR014C PER33Q12144 273 aa2.09□□□□□ -2.07
YPT52YKR014C MED4Q12343 284 aa2.09□□□□□ -2.07
YPT52YKR014C TDH2P00358 332 aaKnown RBP2.08□□□□□ -2.08
YPT52YKR014C POL30P15873 258 aaKnown RBP2.08□□□□□ -2.08
YPT52YKR014C DAL82P21705 255 aa2.08□□□□□ -2.08
YPT52YKR014C PRE7P23724 241 aaKnown RBP2.08□□□□□ -2.08
YPT52YKR014C YCR025CP25352 136 aa2.08□□□□□ -2.08
YPT52YKR014C PEX3P28795 441 aa2.08□□□□□ -2.08
YPT52YKR014C CAB3P36076 571 aa2.08□□□□□ -2.08
YPT52YKR014C MBA1P38300 278 aa2.08□□□□□ -2.08
YPT52YKR014C ATG12P38316 186 aa2.08□□□□□ -2.08
YPT52YKR014C YGP1P38616 354 aaKnown RBP2.08□□□□□ -2.08
YPT52YKR014C YHL044WP38727 235 aa2.08□□□□□ -2.08
YPT52YKR014C NPT1P39683 429 aaKnown RBP2.08□□□□□ -2.08
YPT52YKR014C SEN34P39707 275 aa2.08□□□□□ -2.08
YPT52YKR014C NUP84P52891 726 aa2.08□□□□□ -2.08
YPT52YKR014C YNL134CP53912 376 aaKnown RBP2.08□□□□□ -2.08
YPT52YKR014C ALG11P53954 548 aaKnown RBP2.08□□□□□ -2.08
YPT52YKR014C NNT1Q05874 261 aa2.08□□□□□ -2.08
YPT52YKR014C SEC10Q06245 871 aa2.08□□□□□ -2.08
YPT52YKR014C ARV1Q06541 321 aa2.08□□□□□ -2.08
YPT52YKR014C YOS9Q99220 542 aa2.08□□□□□ -2.08
YPT52YKR014C YMR316C-AI2HB70 103 aa2.07□□□□□ -2.08
YPT52YKR014C RAD3P06839 778 aa2.07□□□□□ -2.08
YPT52YKR014C MSF1P08425 469 aa2.07□□□□□ -2.08
YPT52YKR014C ATG15P25641 520 aa2.07□□□□□ -2.08
YPT52YKR014C AVT7P40501 490 aa2.07□□□□□ -2.08
YPT52YKR014C LIA1P47120 325 aaKnown RBP2.07□□□□□ -2.08
YPT52YKR014C TIM21P53220 239 aa2.07□□□□□ -2.08
YPT52YKR014C RGM1Q00453 211 aa2.07□□□□□ -2.08
YPT52YKR014C CDC14Q00684 551 aa2.07□□□□□ -2.08
YPT52YKR014C MRS2Q01926 470 aa2.07□□□□□ -2.08
YPT52YKR014C FEX1Q08913 375 aa2.07□□□□□ -2.08
YPT52YKR014C FEX2Q08991 375 aa2.07□□□□□ -2.08
YPT52YKR014C TIM22Q12328 207 aa2.07□□□□□ -2.08
YPT52YKR014C YAL063C-AQ3E791 96 aa2.07□□□□□ -2.08
YPT52YKR014C STH1P32597 1359 aa2.07□□□□□ -2.08
YPT52YKR014C YAL064W-BO13512 126 aa2.06□□□□□ -2.08
YPT52YKR014C CDC42P19073 191 aa2.06□□□□□ -2.08
YPT52YKR014C CWP1P28319 239 aa2.06□□□□□ -2.08
YPT52YKR014C CAM1P29547 415 aaKnown RBP2.06□□□□□ -2.08
YPT52YKR014C KRE6P32486 720 aa2.06□□□□□ -2.08
YPT52YKR014C YHR045WP38775 560 aa2.06□□□□□ -2.08
YPT52YKR014C BIG1P38813 335 aa2.06□□□□□ -2.08
YPT52YKR014C YJR012CP47087 207 aa2.06□□□□□ -2.08
YPT52YKR014C NBP1P52919 319 aaPredicted RBP2.06□□□□□ -2.08
YPT52YKR014C SYF2P53277 215 aaPredicted RBP2.06□□□□□ -2.08
YPT52YKR014C MNT4P53745 580 aa2.06□□□□□ -2.08
YPT52YKR014C TY3A-GQ12173 290 aa2.06□□□□□ -2.08
YPT52YKR014C TY3A-IQ99219 290 aa2.06□□□□□ -2.08
YPT52YKR014C RPP0P05317 312 aaKnown RBP2.05□□□□□ -2.08
YPT52YKR014C SNF6P18888 332 aa2.05□□□□□ -2.08
YPT52YKR014C CAT2P32796 670 aaKnown RBP2.05□□□□□ -2.08
YPT52YKR014C PRS4P38063 326 aaPredicted RBP2.05□□□□□ -2.08
YPT52YKR014C PRS2P38620 318 aaKnown RBP2.05□□□□□ -2.08
YPT52YKR014C AVT6P40074 448 aa2.05□□□□□ -2.08
YPT52YKR014C SYS1P41544 203 aa2.05□□□□□ -2.08
YPT52YKR014C AGX1P43567 385 aa2.05□□□□□ -2.08
YPT52YKR014C MIG2P53035 382 aa2.05□□□□□ -2.08
YPT52YKR014C PET117Q02771 107 aa2.05□□□□□ -2.08
YPT52YKR014C SRL4Q03085 281 aa2.05□□□□□ -2.08
YPT52YKR014C YDR209CQ03480 137 aa2.05□□□□□ -2.08
YPT52YKR014C YDL144CQ07589 356 aa2.05□□□□□ -2.08
YPT52YKR014C SDO1Q07953 250 aaKnown RBP2.05□□□□□ -2.08
YPT52YKR014C YOR029WQ12243 111 aa2.05□□□□□ -2.08
YPT52YKR014C SME1Q12330 94 aaPredicted RBP2.05□□□□□ -2.08
YPT52YKR014C PHO80P20052 293 aa2.04□□□□□ -2.08
YPT52YKR014C OSM1P21375 501 aaKnown RBP2.04□□□□□ -2.08
YPT52YKR014C SKI2P35207 1287 aaKnown RBP RIP-Chip data2.04□□□□□ -2.08not detected
YPT52YKR014C HEK2P38199 381 aaKnown RBP RIP-Chip data2.04□□□□□ -2.08not detected
YPT52YKR014C POP8P38208 133 aa2.04□□□□□ -2.08
YPT52YKR014C PHO89P38361 574 aa2.04□□□□□ -2.08
YPT52YKR014C YER084WP40057 128 aa2.04□□□□□ -2.08
YPT52YKR014C FMC1P40491 155 aa2.04□□□□□ -2.08
YPT52YKR014C SER33P40510 469 aa2.04□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 107.5 ms